| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,048,805 | Δ48,085 bp | [gfcB]–ycdU | 45 genes [gfcB], gfcA, insA4, insB4, cspH, cspG, ymcF, ymcE, gnsA, yccM, torS, torT, torR, torC, torA, torD, cbpM, cbpA, yccE, agp, yccJ, wrbA, ymdF, rutG, rutF, rutE, rutD, rutC, rutB, rutA, rutR, putA, ymdG, putP, efeO, efeB, phoH, pgaD, pgaC, pgaB, pgaA, dgcT, insF4, insE4, ycdU |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1048805 | 1096889 | 48085 | 68 [0] | [2] 70 | [gfcB]–ycdU | [gfcB],gfcA,insA4,insB4,cspH,cspG,ymcF,ymcE,gnsA,yccM,torS,torT,torR,torC,torA,torD,cbpM,cbpA,yccE,agp,yccJ,wrbA,ymdF,rutG,rutF,rutE,rutD,rutC,rutB,rutA,rutR,putA,ymdG,putP,efeO,efeB,phoH,pgaD,pgaC,pgaB,pgaA,dgcT,insF4,insE4,ycdU |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1048804 | 0 (0.000) | 68 (0.940) | 56/488 | 0.1 | 100% | coding (529/645 nt) | gfcB | lipoprotein GfcB |
| ? | NC_000913 | 1096890 = | 0 (0.000) | intergenic (+61/+675) | ycdU/serX | uncharacterized protein YcdU/tRNA‑Ser | |||||
ACATTTTCCACGGGGCCAACGGAAAGTGTCTGTTGTTCGCCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGTTTTTCTGGCCGCGTGGAAGTCACCTCTTCCTGCCAGACATTACACAGCACATTGCGACCCGCAATATTCAGCGTCTCTAATCCAGCAAAGGAAAAAGTAGAACTCAGGGTCGCAGAGCGAAAATGGTTGTCTTCACTCCAGAGAATATCGCGCGTCCAGCGGCTGCCATCTTTTATTGCCAGCGCGTTACGCAGAGGGTCCTGCCCGGAATTTGTCACTTCCAGCAGATTATTATTAAGTTTGAC > NC_000913/1048558‑1049050 | acaTTTTCCACGGGGCCAACGGAAAGTGTCTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattg > 1:482945‑M1/1‑247 (MQ=255) ccACGGGGCCAACGGAAAGTGTCTGTTGTTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactg < 1:489303‑M1/251‑12 (MQ=255) aggtgactgttgtTCACCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGAACGCTGGCAATGAAATACGACTGAAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACACCTGCGCCTAACATTTGCCGACTTTGACGCACCTGGCCAGTAGCCGAATCGACACAGACTGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagt > 2:454401‑M1/7‑224 (MQ=255) gttgttCACCAGGCAGATAAAGAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGATCCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtg < 1:421702‑M1/248‑33 (MQ=255) tccccaggCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatt < 2:237313‑M1/247‑40 (MQ=255) ccAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttccc < 1:228419‑M1/251‑44 (MQ=255) aGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccct < 1:48062‑M1/251‑46 (MQ=255) ggCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctc < 1:399686‑M1/251‑47 (MQ=255) aGATAAATAGTCACGGTTCCTTGCGAAAATGCAGGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTGCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttccccgcgcc < 2:210627‑M1/251‑50 (MQ=255) aTAAATAGTCCCCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGGGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccct < 2:197664‑M1/251‑52 (MQ=255) aTAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTAAGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGCCGAACCTGGACAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagatgatgtgcacgatttcccctcgccctaac > 2:468225‑M1/1‑196 (MQ=255) gTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagac < 1:47999‑M1/251‑59 (MQ=255) cACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCGGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGACCAGTAGCCGAATCGCCCCAGAATGTGTTTTG‑CACTTGattgttgcctgagtaaccagacagttgatgggcacgattacccctcgccctaacagacgg > 2:401800‑M1/1‑191 (MQ=255) tCCTTGCGCGAAGGCATGGGGTGTCATTACGTAAATTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTGGACGAGCCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcg < 1:258413‑M1/250‑66 (MQ=255) gcAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCCGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacatacgtgcgcgggggcaac > 2:98937‑M1/1‑178 (MQ=255) cAAAGGCATGGGGGGGCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAAACCCTGCGCCTAACATTTGCCGACTTTGACGTACCTGGCCAGTAGCAGCATCGACCCAGAATGTGTTTTGCCCC‑TGattgttgcctgcggaaccagacagttgatgtgcaccctttcacttcgccgtaaaagccgtgggtgggggcaccc > 2:201611‑M1/1‑177 (MQ=255) aaaagGCATGGGGGGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcaccc < 2:182415‑M1/250‑75 (MQ=255) aaaGGCATTGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtggtcgggggcacccg < 2:470273‑M1/251‑76 (MQ=255) aaaGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccg > 1:187236‑M1/1‑176 (MQ=255) gCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgt > 1:540214‑M1/1‑172 (MQ=255) gCATGGGGTGGCATTACGTAAAGTACGCTGGCAATGAAATACGACGGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcttgggcacccggtgt < 2:22773‑M1/251‑80 (MQ=255) gtgtCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaat < 1:124616‑M1/251‑87 (MQ=255) cATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatac > 1:32511‑M1/1‑161 (MQ=255) gTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgg > 2:83321‑M1/1‑155 (MQ=255) gTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgg < 1:83321‑M1/217‑63 (MQ=255) aaaGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaa > 1:174015‑M1/1‑153 (MQ=255) aaaGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGACGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGcttgttgactgagtcaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccgggttgtgcaatatacgaaaaaa > 2:234446‑M1/1‑153 (MQ=255) ggCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtact > 1:537845‑M1/1‑143 (MQ=255) cAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtacttt < 1:70372‑M1/251‑111 (MQ=255) aaTGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttc < 1:212056‑M1/251‑112 (MQ=255) aaTGAAATACGAATGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGACTAACATTTTCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAAGGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcccccggtgtgtgcaatatacgaaaaaaaagcccgtacttta < 2:562128‑M1/251‑112 (MQ=255) aTGAAATACGACTGTAATTTATGCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgttctttcg < 1:101819‑M1/251‑113 (MQ=255) aattcgactGTAATTTATTCAGGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTGGACGAACCTTGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcggtggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtact < 2:251161‑M1/247‑117 (MQ=255) gtctgTAATTTATTCATGGTGCGGGTTTAAGAAACGACATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGCCTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcaaccggtgtgtgcaatagacgaaaaaaaagcccgtactttcgtacgagctc < 1:169985‑M1/249‑122 (MQ=255) gTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAAAATTTGCCGACTTTGACGAACCTGTCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagacagtactttcgtacgagctcttct > 1:420376‑M1/1‑126 (MQ=255) aTTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGCACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaanaaacccgtacttacgtacgagcacttcttt > 2:292947‑M1/1‑123 (MQ=255) aTTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaat < 1:447536‑M1/250‑132 (MQ=255) tCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTGTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtactagctcttctttaaatat < 1:407153‑M1/250‑134 (MQ=255) tCATGGTGCGGGTTTAAGAAACGTCATTTATACGGGAATAACCCCGGCGGCTAACATTGGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtaccttcgtacgagctcttctttaaatat < 2:440462‑M1/250‑134 (MQ=255) cATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatg < 1:188053‑M1/250‑135 (MQ=255) aTGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgcctgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggc > 2:317032‑M1/1‑115 (MQ=255) aTGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagccgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggc > 2:395709‑M1/1‑115 (MQ=255) tGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacacggtgtgggcactatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggcg > 2:538806‑M1/1‑111 (MQ=255) tGCGGGTTTAAGAAACGTCATTTCTACGCGAATAACCCATGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtg > 1:178927‑M1/1‑111 (MQ=255) gggTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtgagg < 1:562649‑M1/251‑144 (MQ=255) gggTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtgagg < 1:454401‑M1/251‑144 (MQ=255) ttAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcgggaggggggg > 1:535433‑M1/1‑104 (MQ=255) aGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcgggggggggggggg > 1:437338‑M1/1‑101 (MQ=255) gAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggttagggggggggt > 1:132921‑M1/1‑100 (MQ=255) gAAACGTAATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtaagagcttctctttaaatatgtcgggcggggggggagg > 1:148963‑M1/1‑100 (MQ=255) aaaCGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtgagggggggattg < 1:581409‑M1/251‑153 (MQ=255) tCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTAGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgaggaaccagacaggtgatgggcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgagcaatatacgaaaaaaaagcccggactttcgtacgagcacttcattaaagatggcggtggaggggggtgtggctac > 2:378571‑M1/1‑94 (MQ=255) cATTTATACGGGAATAACCCCTGCGCCGAACATTTGCCGACTTTGACGAACCTGGCCTGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatccgaaaaaaaagcccgtacgttcgtacgagctcttctttaaatatggcggtgagggggggattgactcgc < 1:228370‑M1/251‑159 (MQ=255) aTTTCTACGGGAATAACCCCTGCGCCTAACATTTGCGGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgattaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtgagggggggattgactcgct < 2:473209‑M1/251‑160 (MQ=255) aTTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtgagggggggattgactcgct < 1:85168‑M1/251‑160 (MQ=255) tCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtgagggggggattgactcgcttc < 1:39200‑M1/250‑162 (MQ=255) aCGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCCC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtgagggggggattgactcgcttcgct < 1:134505‑M1/250‑165 (MQ=255) cGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGCACCTGGCCAGTACCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgggtaaccagacagttgatgtgcacgatttcccctcgccctaacaaacgggggcgggggcacccggtgtctgcaatatacgaaaaaaaagaccgtcctctcgtacgagctcttctttaaatatggcggggtgagggggggtgtatcgcgccgtgcc > 1:267282‑M1/1‑85 (MQ=255) aaCCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑AGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtgaggggggggattaatagcttctcttcccctgcg > 1:24197‑M1/1‑78 (MQ=255) gACGAACCTGGCCAGTACCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgggggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtgagggtgggattgactcgcttcgctcgccctgcgggcagcccgctcactgcgttcacggtct < 2:24197‑M1/250‑202 (MQ=255) ggCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtgaggggggggtttagatgcttccccccccctccgggcgacccgcccactccgttcacggtctggccaactgg > 1:336992‑M1/1‑40 (MQ=255) gAATCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtgagggggggattgactcgcttcgctcgccctgcgggcagcccgctcactgcgttcacggtctgtccaactggctgtcgccagt < 1:252005‑M1/251‑223 (MQ=255) aaTCGACCCAGAATGTGTTTTGCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtgagggggggattgactcgcttcgctcgccctgcgggcagcccgctcactgcgttcacggtctgtccaactggctgtcgccagtt < 1:77152‑M1/251‑224 (MQ=255) aaTGTGTTTTGCCAC‑TGattgttgactgagtaaccagacaggtgatgtgcacgatttcccctcgccctaacatacgtgggcgggggcactcggtgtgtgcaatatacgaaaaaaaagcccgtacgttcgtacgagctcttctttaaatatggcggtgagggggggattgactcgcttcgctcgccctgcgggcagcccgctcactgcgttcacgttctgtccaactggctgtcgccagttgtctacccccg < 1:46945‑M1/251‑235 (MQ=255) gCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaat > 2:383243‑M1/1‑7 (MQ=255) gCCAC‑TGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaat < 1:383243‑M1/93‑87 (MQ=255) ccAC‑GGattgttgactgagtaaccagacagttgatgtgcacgatttcccctcgccctaacagacgtgggcgggggcacccggtgtgtgcaatatacgaaaaaaaagcccgtactttcgtacgagctcttctttaaatatggcggtgagggggggattgactcgcttcgctcgccctgcgggcagcccgctcactgcgttcacggtctgtccaactggctgtcgccagttgtcgacccccggtcggggcttc < 2:540214‑M1/251‑246 (MQ=255) cAC‑TGattgttgactgagtaaccagacagttgatgttcacgatttcccctcgccctaacagacgtgggcggtgtcacccggtgtgtgcaatatacgaaaaaaaagcccgttctttcttacgagctcttctttaaatattgcgttgagtgggtgattgactctcttcgctcgccctgcgtgcagcctgctcacttcgttcacggtctgtccaactggctgtcgccagttgtcgacccccggtcgggtcttct < 1:271320‑M1/251‑247 (MQ=255) | ACATTTTCCACGGGGCCAACGGAAAGTGTCTGTTGTTCGCCAGGCAGATAAATAGTCACCGTTCCTTGCGCAAAGGCATGGGGTGTCATTACGTAAAGTACGCTGGCAATGAAATACGACTGTAATTTATTCATGGTGCGGGTTTAAGAAACGTCATTTCTACGGGAATAACCCCTGCGCCTAACATTTGCCGACTTTGACGAACCTGGCCAGTAGCCGAATCGACCCAGAATGTGTTTTGCCAC‑TGTTTTTCTGGCCGCGTGGAAGTCACCTCTTCCTGCCAGACATTACACAGCACATTGCGACCCGCAATATTCAGCGTCTCTAATCCAGCAAAGGAAAAAGTAGAACTCAGGGTCGCAGAGCGAAAATGGTTGTCTTCACTCCAGAGAATATCGCGCGTCCAGCGGCTGCCATCTTTTATTGCCAGCGCGTTACGCAGAGGGTCCTGCCCGGAATTTGTCACTTCCAGCAGATTATTATTAAGTTTGAC > NC_000913/1048558‑1049050 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |