| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,804,790 | Δ5,840 bp | proV–[ygaH] | proV, proW, proX, ygaZ, [ygaH] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2804790 | 2810629 | 5840 | 34 [0] | [0] 34 | proV–[ygaH] | proV,proW,proX,ygaZ,[ygaH] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2804789 | 0 (0.000) | 34 (0.590) | 33/490 | 0.4 | 100% | intergenic (+328/‑26) | nrdF/proV | ribonucleoside‑diphosphate reductase 2 subunit beta/glycine betaine ABC transporter ATP binding subunit ProV |
| ? | NC_000913 | 2810630 = | 0 (0.000) | coding (287/336 nt) | ygaH | L‑valine exporter, YgaH component | |||||
GCTATTTGCCGCTGCGCCTGCGTGTGGGTAATGCCCGCCCAACCAAACGTGGCGCGGTAGGTATTTTGCTCGACACCATTGGCATCGCCTCGATATGCGCTCTGCTGGTTGTCTCTACCGCACCAGAAGTGATGCACGATACACGCCGTTTCGTGCCCACGCTGGTCGGCTTCGCGGTACTGGGTGCCAGTTTCTATAAAACACGCAGCATTATCATCCCAACACTGCTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTG‑AACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTCTGACTCGTCTTTGCATGCACATGC > NC_000913/2810402‑2810878 | tctgttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctctcagcccttatatcacgggaaattccggcgatttgctcgcatcaatattcatgccacatttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTc > 1:306968‑M2/229‑251 (MQ=255) gttgcattattcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctctcagcccttatatcacgggaaattccggcgatttgctcgcatcaatattcatgccacatttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGc < 2:113464‑M2/25‑1 (MQ=255) ttcgcctgaaaccaaaatattcaggcgttttttcgctatctttgacaaaaaatatcaacattctcgatttgctctcagcccttatatcacgggaaattccggcgatttgctcgcatcaatattcatgccacatttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTg > 2:63308‑M2/217‑251 (MQ=255) tcgcctgaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctctcagcccttatatcacgggaaattccggcgatttgctcgcatcaatattcatgccacatttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTg > 1:221236‑M2/216‑250 (MQ=255) gaaaccccaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctctcagcccttatatcacgggaaattccggcgatttgctcgcatcaatattcatgccacatttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCg < 2:94805‑M2/41‑1 (MQ=255) gaaaccacaatattcaggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctctcagcccttatatcacgggaaattccggcgatttgctcgcatcaatattcatgccacatttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGa < 1:318854‑M2/42‑1 (MQ=255) attcaggcgttgttgcgctatctttgacaaaaaatatcaactttctctatttgctctcatcccttatatcacgtgaaattccggcgatttgctcgcatcaatattcatgccacatttgccatcaggggttgcctcatattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcttcatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAAcc < 2:303022‑M2/52‑1 (MQ=255) ggcgttttttcgctatctttgacaaaaaatatcaactttctcgatttgctctcagcccttatatcccgggaaattccggcgatttgctcgcatcaatattcatgccacaattgccatcaggggttgcctcagattctccgtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTc > 1:296882‑M2/194‑216 (MQ=255) ggcgttttttcgctatctttgacaaaaaatatcaactgtctcgatttgctctcagcccttatagcacgggaaattcctgcgatttgctcgcatcaatattcatgccacatttgccatcaggggttgcctcagtttctcagtattttagggtagaaaaaagtgactatttccattgggtaatatatcgacagagTTATTTCGCTGTCCTATGGGCTc < 2:296882‑M2/23‑1 (MQ=255) ttcgctatctttgacaaaaaatatcatctttctcgatttgctctcagcccttatatcacgggaaatgccggcgatttgctcgcatcaatattcatgccacagttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAGCCCACAAGAATCAtt < 2:427491‑M2/65‑1 (MQ=255) ttgacaaaaaatatcaacttgctcgatttgctctcagcccttatatcacgggaaattccggcgatttgctcgcatcaatattcatgccacatgtgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactttgtccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTaa < 1:82659‑M2/72‑1 (MQ=255) ttctcgatttgctctcagcccttatatcacgggaaatgccggcgatttgctcgcatcaatattcaggtcacatttgccttcatgggttgcctcagattctcagtatgttagtgtagaaaaaagtgtctatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGTGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTg < 1:202072‑M2/94‑1 (MQ=255) cagcccttatatcacgggaaattccggcgatttgctcgcatcaatattcatgccacatttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACtat < 1:133090‑M2/110‑1 (MQ=255) cagcccttatatcacgggaaattccggcgatttgctcgcatcaatattcatgccacatttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACtat > 2:436305‑M2/142‑251 (MQ=255) atatcacgggaaattccggcgatttgctcgcatcaatattcatgccacatttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagggactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTg < 2:342335‑M2/118‑1 (MQ=255) tcacgggaaattccggcgatttgctcgcatcaatattcatgcaacatttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagggactatttccattgggaaatatatagacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAAAAATACATTTACTTTATTTGTCACGGTCGTTCCTATATAGGCTGaa > 2:245359‑M2/131‑250 (MQ=255) ggaaattccggcgatttgcgcgcatcaatattcatgccacatttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAAt < 1:228973‑M2/126‑1 (MQ=255) cggcgatttgctcgcatcaatattcatgccacatttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactattgccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTTTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGTCAt < 1:190476‑M2/134‑1 (MQ=255) gctcgcatcaatattcatgccacatttgccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAAAAATACATTAACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGTGGTCATACCCAAatt > 2:457321‑M2/109‑250 (MQ=255) atgcaggccacatttgccatcaggggttgcctcagattcgaagtatgttagggtagaaaaaagggactatttccattgggtaatatatcgacatagTTAGTGCGCGGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACGGTCGTTACTATATCGGCTGAAATTAATGATGTAATGCCTAAATGGATAGTTCGtt < 2:83788‑M2/154‑1 (MQ=255) gccatcaggggttgcctcagattctcagtattttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTG‑AACaa < 1:162312‑M2/170‑1 (MQ=255) gccatcaggggttgcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGAAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTCCGCCCATTG‑AACa > 2:34883‑M2/82‑250 (MQ=255) aggggatgccttcgattctcagaatgttagggtagaaaaaaggggatatttccattgggtaatatattgacatagATAGAGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTTCTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATTAGGTCATACCCAAATGGGTAGATCGTTTACGCCCattgcaacaatgct > 2:92331‑M2/76‑246 (MQ=255) gcctcagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGGCACTGTCGTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTG‑AACAAATGCTAAAAttt < 1:112585‑M2/182‑1 (MQ=255) gcctcaaattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgccatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAAGTCATACCCAAATGGATAGTTCGTTTACTCCCATTG‑AACAAATGCTAAAAttt < 2:70191‑M2/182‑1 (MQ=255) cagattctcagtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTG‑AACAAATGCTAAAATTTCgcgc < 1:84993‑M2/187‑1 (MQ=255) gtatgttagggtagaaaaaagtgactatttccattgggtaatatatcgacatagTTAGGGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCTTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTG‑AACAAATGCTAAAATTTCGCGCCAGCCGCCAc < 1:161955‑M2/197‑1 (MQ=255) atgttcgggtagaaaaacgagactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGCAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTG‑AACAAATGCTAAAATTTCACGCCCGCCGCCAcgc > 2:158924‑M2/53‑250 (MQ=255) gtagaaaaaagagactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCAATGTCGTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTG‑AACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTc > 1:20908‑M2/45‑251 (MQ=255) aagtgactatttccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTG‑AAACAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATc > 1:120600‑M2/37‑249 (MQ=255) tccattgggtaatatatcgacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTG‑AACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTCt > 1:311529‑M2/26‑251 (MQ=255) aatatatcgacatagTTAGTGCGCTGGCCTATGGGTGCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTG‑AACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTCTGACTCGTCtt < 1:354779‑M2/236‑1 (MQ=255) gacatagTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTG‑AACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTCTGACTCGTCTTtgcatgc > 1:73614‑M2/8‑250 (MQ=255) gTTAGAGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTG‑AACAAATGCTAAAATTTCGCGCAAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTCAGACCcgtctttgcatgccaatga > 2:310332‑M2/2‑244 (MQ=255) | GCTATTTGCCGCTGCGCCTGCGTGTGGGTAATGCCCGCCCAACCAAACGTGGCGCGGTAGGTATTTTGCTCGACACCATTGGCATCGCCTCGATATGCGCTCTGCTGGTTGTCTCTACCGCACCAGAAGTGATGCACGATACACGCCGTTTCGTGCCCACGCTGGTCGGCTTCGCGGTACTGGGTGCCAGTTTCTATAAAACACGCAGCATTATCATCCCAACACTGCTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGTCATACCCAAATGGATAGTTCGTTTACGCCCATTG‑AACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTCTGACTCGTCTTTGCATGCACATGC > NC_000913/2810402‑2810878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |