Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,496,758 Δ13,333 bp insC6insO insC6, insD6, yjgZ, insG, nanX, nanY, ythA, insO, insI3, insO, insO

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4496758 4510090 13333 50 [0] [0] 50 insC6–insO insC6,insD6,yjgZ,insG,nanX,nanY,ythA,insO,insI3,insO,insO

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 44967570 (0.000)49 (0.750) 48/478 0.1 100% intergenic (+268/‑1515) leuX/insC6 tRNA‑Leu/IS2 insertion element repressor InsA
?NC_000913 4510091 = 0 (0.000)intergenic (+298/+599) insO/fecE IS911B regulator fragment/ferric citrate ABC transporter ATP binding subunit

AGCAGGAGATCATCCAGCCGCAGTACAGGTCACGATGACTCTGGTTAATGATACCGGCTTTGACCCCGTATTTTCCGGCTCTATCGCTGAATCATGGCGTCAGCAGCCGTGCACACCATCCTATTGTTGTGACTGGGAGGCTGCCACCATGCTTCGCGCTTTCCCTCTGGCGAAAAAGGGAGAAGGACGGGCCCGTCTGCCTTCACTTTATGCCAGCTTCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCAC  >  NC_000913/4509842‑4510337
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                      
caactgaggtctttttttatgcatgaaatccagtgtttatctatctgtcccgctatattaactcgctcaaggtcaaccgatatcaacgtacatctaccaacatatgttggtacagatgatgggatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAg                                                                                                                                                                                                                                                       <  2:471571‑M2/2‑1 (MQ=255)
   ctgaggtctttttttatgcctgaaatccagtgtttatctatctttcccgctatattaactctctcaaggtcaaccgatatcaacgtacatctaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgactctAGat                                                                                                                                                                                                                                                     >  1:428927‑M2/247‑250 (MQ=255)
                                        ctatctttcccgctatattaactctctcaaggtcaaccgatatcaacgtacatctaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGtat                                                                                                                                                                                                                >  1:395995‑M2/210‑250 (MQ=255)
                                          atctttcccgctatattaactctctcaaggtcaaccgatatcaacgaaaatctaccaacatctgttggtacagatgatggtatttccggttcgctaatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCATGTATAAc                                                                                                                                                                                                             >  1:447939‑M2/208‑251 (MQ=255)
                                          atctttcccgctatattaactcgctcaaggtcaaccgatatcaacgtacatctaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATaa                                                                                                                                                                                                              <  1:73073‑M2/43‑1 (MQ=255)
                                             tttcccgctatattaactctctcaaggtcaaccgatatcaacgtacatcgaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcgggatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTg                                                                                                                                                                                                          >  1:275843‑M2/205‑251 (MQ=255)
                                              ttcccgctatattaactctctcaaggtcaaccgatatcaacgtacatctaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTgg                                                                                                                                                                                                         >  2:362014‑M2/204‑251 (MQ=255)
                                                           aactctctcaaggtcaaccgatatcaacgtacatctaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTa                                                                                                                                                                                            <  1:376278‑M2/61‑1 (MQ=255)
                                                            actctctcaaggtcaaccgatatcaacgtacatctaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTa                                                                                                                                                                                            >  1:479935‑M2/190‑250 (MQ=255)
                                                                           accgatatcaacgtacatctaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCg                                                                                                                                                                                                   <  2:299963‑M2/54‑1 (MQ=255)
                                                                           accgatatcaacgtacatctaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCg                                                                                                                                                                                                   >  1:299963‑M2/175‑228 (MQ=255)
                                                                              gatatcaacgtacatctaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATc                                                                                                                                                                                                                                     <  1:104667‑M2/20‑1 (MQ=255)
                                                                              gatatcaacgtacatctaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATc                                                                                                                                                                                                                                     >  2:104667‑M2/172‑191 (MQ=255)
                                                                              gagatcaacgtgcatctcccaacatatgttgggacagatgatgggatttccggttcgataatgcttgtaccaacagggaggcaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtaggcatctAGATAGCATGTATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCAGTGATTAAGAAATCTGCAcctaccta                                                                                                                                                                         <  2:447939‑M2/80‑1 (MQ=255)
                                                                                         acatctaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTg                                                                                                                                                                                   >  2:105565‑M2/161‑230 (MQ=255)
                                                                                         acatctaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTg                                                                                                                                                                                   <  1:105565‑M2/70‑1 (MQ=255)
                                                                                          cgcaagtggcgatatgttggtaaagaggatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGAGTAAGAAAGCTGCACCTACCTAAGTGGTAGCaaa                                                                                                                                                             <  2:343465‑M2/92‑1 (MQ=255)
                                                                                            tctaccaacatatgttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACg                                                                                                                                                           >  1:153520‑M2/158‑251 (MQ=255)
                                                                                                   acataggttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACtt                                                                                                                                                    <  2:317151‑M2/101‑1 (MQ=255)
                                                                                                         gttggtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACttttt                                                                                                                                                 >  2:69046‑M2/145‑248 (MQ=255)
                                                                                                             gtacagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGaaaa                                                                                                                                           >  1:421041‑M2/141‑250 (MQ=255)
                                                                                                               acagatgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATc                                                                                                                                        <  2:153520‑M2/113‑1 (MQ=255)
                                                                                                                   atgatggtatttccggttcgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATg                                                                                                                                    >  1:137701‑M2/135‑251 (MQ=255)
                                                                                                                               ccggttcgataatgcttgtaccaacagggagggaatactatggcattaacagatatcaaagtcagagcagccaagccaacgtataagcaatattagctgactgatggtggcgttatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATATCGTGGCTGCCGGTGATTAAGAAAGCTGCACCTCCCTAAGTAGTAGCAAACGCGCGCTTTTTAGAAAAATCGATGTTCAGAAACTg                                                                                                                         <  1:90470‑M2/128‑1 (MQ=255)
                                                                                                                                cggttcgataatgcttgtgccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCCCACTTTTTAGAAAAATCGATGGTCAGAAACTgg                                                                                                                        >  2:407823‑M2/122‑250 (MQ=255)
                                                                                                                                     cgataatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGc                                                                                                                  >  1:156898‑M2/117‑251 (MQ=255)
                                                                                                                                        taatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAAt                                                                                                               >  2:484467‑M2/114‑251 (MQ=255)
                                                                                                                                         aatgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtttgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAAtt                                                                                                              >  2:465080‑M2/113‑251 (MQ=255)
                                                                                                                                          atgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTTCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTc                                                                                                             <  1:460518‑M2/140‑1 (MQ=255)
                                                                                                                                          atgcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatatAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGCTTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACAATTTTTAGAAAAATCGATGGGCAGAAACTGGCTTAGCAATTc                                                                                                             >  2:376312‑M2/112‑251 (MQ=255)
                                                                                                                                            gcttgtaccaacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTcc                                                                                                            <  1:115841‑M2/141‑1 (MQ=255)
                                                                                                                                                    caacagggagggaatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATgg                                                                                                   <  2:23991‑M2/150‑1 (MQ=255)
                                                                                                                                                                aatacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtaggcatctAGATATCATTGATAACAAGCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGAtt                                                                                       <  2:479935‑M2/162‑1 (MQ=255)
                                                                                                                                                                  tacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGca                                                                                                                                                         >  1:198211‑M2/88‑183 (MQ=255)
                                                                                                                                                                  tacgatggcattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGca                                                                                                                                                         <  2:198211‑M2/96‑1 (MQ=255)
                                                                                                                                                                          cattaacagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCg                                                                             >  1:348640‑M2/80‑251 (MQ=255)
                                                                                                                                                                               acagatatcaaagtcagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGa                                                                        <  1:1022‑M2/177‑1 (MQ=255)
                                                                                                                                                                                         aagtcagagcatccaagccaacggatcagcactattagctgcctgatggtggcgttttgcatctAGATATCCTTGATAACAATCGATCCATCAACTGGCCTGTCTAACGTGGCTGCCGGAGATTAAGACAGCTGCACCTACCTAAGTAGTAGCAACCGCACACTTTTTAGAAAAATCGATGGTCAGCACCTGGCTTAGCACTTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGATCCTTGCttt                                                              >  2:176875‑M2/65‑251 (MQ=255)
                                                                                                                                                                                             cagagcagccaagccaacggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATcc                                                          <  1:426206‑M2/191‑1 (MQ=255)
                                                                                                                                                                                                   agccaagccaacggataagcaatattagctgactgatggtggcggtatgcatcaAGATATCATTGATAACAAACGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGCTTAAGAAAACTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACTTTGGCGTCTGATCATTGGTTTATCCTCaaa                                                     >  2:14846‑M2/55‑250 (MQ=255)
                                                                                                                                                                                                               ggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGATCATTGTTTTATCCTCAAAAGCCCAACCTCAt                                        >  2:497773‑M2/43‑251 (MQ=255)
                                                                                                                                                                                                               ggataagcaatattagctgactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCAt                                        >  1:342565‑M2/43‑251 (MQ=255)
                                                                                                                                                                                                                          attagctgactgatggtggcgttatgcatctAGATATCATTGATAACAATCGATCCATCAACGGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCGAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGTTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGTCGTCTGATCATTGATTTATCCTCAAAAGCCCAGCCTCATTTGTAATGAAc                             <  2:209333‑M2/220‑1 (MQ=255)
                                                                                                                                                                                                                                 gactgatggtggcggtttgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTcc                      <  1:465080‑M2/227‑1 (MQ=255)
                                                                                                                                                                                                                                 gactgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTcc                      >  1:124434‑M2/25‑251 (MQ=255)
                                                                                                                                                                                                                                  actgatggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCg                     >  1:317767‑M2/24‑251 (MQ=255)
                                                                                                                                                                                                                                      atggtggcggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGa                  >  2:385824‑M2/20‑250 (MQ=255)
                                                                                                                                                                                                                                             cggtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCNTTGGTAATGAACCAGCTCCGTGAATGTCCGc          >  2:226303‑M2/13‑251 (MQ=255)
                                                                                                                                                                                                                                               gtatgcatctAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGCAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGTACCAGCTCCGTGAATGTCcgccc        >  2:3220‑M2/11‑249 (MQ=255)
                                                                                                                                                                                                                                                         aGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGcac  <  2:317767/247‑1 (MQ=255)
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                      
AGCAGGAGATCATCCAGCCGCAGTACAGGTCACGATGACTCTGGTTAATGATACCGGCTTTGACCCCGTATTTTCCGGCTCTATCGCTGAATCATGGCGTCAGCAGCCGTGCACACCATCCTATTGTTGTGACTGGGAGGCTGCCACCATGCTTCGCGCTTTCCCTCTGGCGAAAAAGGGAGAAGGACGGGCCCGTCTGCCTTCACTTTATGCCAGCTTCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAACGTGGCTGCCGGTGATTAAGAAAGCTGCACCTACCTAAGTAGTAGCAAACGCACACTTTTTAGAAAAATCGATGGTCAGAAACTGGATTAGCAATTCCGTTCCATGGTTGCTTTTGATTTACGTTGGCGTCTGATCATTGATTTATCCTCAAAAGCCCAACCTCATTGGTAATGAACCAGCTCCGTGAATGTCCGCTCTGGCAC  >  NC_000913/4509842‑4510337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: