Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,496,758 Δ13,333 bp insC6insO insC6, insD6, yjgZ, insG, nanX, nanY, ythA, insO, insI3, insO, insO

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4496758 4510090 13333 50 [0] [0] 50 insC6–insO insC6,insD6,yjgZ,insG,nanX,nanY,ythA,insO,insI3,insO,insO

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 44967570 (0.000)49 (0.750) 48/478 0.1 100% intergenic (+268/‑1515) leuX/insC6 tRNA‑Leu/IS2 insertion element repressor InsA
?NC_000913 4510091 = 0 (0.000)intergenic (+298/+599) insO/fecE IS911B regulator fragment/ferric citrate ABC transporter ATP binding subunit

CAACTGAGGTCTTTTTTTATGCCTGAAATCCAGTGTTTATCTATCTTTCCCGCTATATTAACTCTCTCAAGGTCAACCGATATCAACGTACATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTGCTTGTCCATCCAAATGGTTCTAAGTACTGGCGTTTGCAGTACCGTTATGAGGGAAAGCAAAAAATGCTGGCACTTGGGGTTTATCCTGAAATCACACTAGCGGATGCCAGAGTACGTCGTGACGAGGCGCGTAAGCTGCTTGCGAATGGCGTCGATCCGGGAGACAAAAAGAAAAATGATAAGGTTGAACAGAGTAAAGCACGAACCTTTAAAGAAGTCGCGATTGAGTGGCATGGCACC  >  NC_000913/4496509‑4496998
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                 
cAACTGAGGTCTTTTTTTATGCATGAAATCCAGTGTTTATCTATCTGTCCCGCTATATTAACTCGCTCAAGGTCAACCGATATCAACGTACATCTACCAACATATGTTGGTACAGATGATGGGATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTag                                                                                                                                                                                                                                                 <  2:471571‑M1/251‑3 (MQ=255)
   cTGAGGTCTTTTTTTATGCCTGAAATCCAGTGTTTATCTATCTTTCCCGCTATATTAACTCTCTCAAGGTCAACCGATATCAACGTACATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGACTCTagat                                                                                                                                                                                                                                               >  1:428927‑M1/1‑246 (MQ=255)
            ttttttATGCCTGAAATCCAGTGTTTATCTATCTTTCCCGCTATATCACCTCTCTCAAAGTCAACCGATATCAACGTACATATACAAACATATATTGGTACACATGATGTTATTTCCGGTTCGATACTACTTATACCACCAGGGAGGGAATAAGATGGCATTAACAGATATCCCATTCAGAGCAGCCAAGCCAACGGATACGCAATATTGGCTGCCTGATGGTGGAGGTCTGCctctagatatcattgat                                                                                                                                                                                                                                      >  2:474846/1‑237 (MQ=255)
                                        ctatctTTCCCGCTATATTAACTCTCTCAAGGTCAACCGATATCAACGTACATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtat                                                                                                                                                                                                          >  1:395995‑M1/1‑209 (MQ=255)
                                          atctTTCCCGCTATATTAACTCTCTCAAGGTCAACCGATATCAACGAAAATCTACCAACATCTGTTGGTACAGATGATGGTATTTCCGGTTCGCTAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcatgtataac                                                                                                                                                                                                       >  1:447939‑M1/1‑207 (MQ=255)
                                          atctTTCCCGCTATATTAACTCGCTCAAGGTCAACCGATATCAACGTACATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataa                                                                                                                                                                                                        <  1:73073‑M1/250‑44 (MQ=255)
                                             tttCCCGCTATATTAACTCTCTCAAGGTCAACCGATATCAACGTACATCGACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGGATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtg                                                                                                                                                                                                    >  1:275843‑M1/1‑204 (MQ=255)
                                              ttCCCGCTATATTAACTCTCTCAAGGTCAACCGATATCAACGTACATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtgg                                                                                                                                                                                                   >  2:362014‑M1/1‑203 (MQ=255)
                                                           aaCTCTCTCAAGGTCAACCGATATCAACGTACATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgatta                                                                                                                                                                                      <  1:376278‑M1/251‑62 (MQ=255)
                                                            aCTCTCTCAAGGTCAACCGATATCAACGTACATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgatta                                                                                                                                                                                      >  1:479935‑M1/1‑189 (MQ=255)
                                                                           aCCGATATCAACGTACATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccg                                                                                                                                                                                             <  2:299963‑M1/228‑55 (MQ=255)
                                                                           aCCGATATCAACGTACATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccg                                                                                                                                                                                             >  1:299963‑M1/1‑174 (MQ=255)
                                                                              gagatcaaCGTGCATCTCCCAACATATGTTGGGACAGATGATGGGATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGCAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTAGGCATCTagatagcatgtataacaatcgatccatcaactggcctgtataacgtggctgccagtgattaagaaatctgcacctaccta                                                                                                                                                                   <  2:447939‑M1/248‑81 (MQ=255)
                                                                              gATATCAACGTACATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatc                                                                                                                                                                                                                               <  1:104667‑M1/191‑21 (MQ=255)
                                                                              gATATCAACGTACATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatc                                                                                                                                                                                                                               >  2:104667‑M1/1‑171 (MQ=255)
                                                                                         aCATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctg                                                                                                                                                                             <  1:105565‑M1/230‑71 (MQ=255)
                                                                                         aCATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctg                                                                                                                                                                             >  2:105565‑M1/1‑160 (MQ=255)
                                                                                          cgcaagtggcgatatgttggtaaagaGGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgagtaagaaagctgcacctacctaagtggtagcaaa                                                                                                                                                       <  2:343465‑M1/240‑93 (MQ=255)
                                                                                            tCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacg                                                                                                                                                     >  1:153520‑M1/1‑157 (MQ=255)
                                                                                                   aCATAGGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactt                                                                                                                                              <  2:317151‑M1/251‑102 (MQ=255)
                                                                                                         gTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacacttttt                                                                                                                                           >  2:69046‑M1/1‑144 (MQ=255)
                                                                                                             gTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaa                                                                                                                                     >  1:421041‑M1/1‑140 (MQ=255)
                                                                                                               aCAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatc                                                                                                                                  <  2:153520‑M1/251‑114 (MQ=255)
                                                                                                                   atgatgGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatg                                                                                                                              >  1:137701‑M1/1‑134 (MQ=255)
                                                                                                                               ccGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACTATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGTATAAGCAATATTAGCTGACTGATGGTGGCGTTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtatatcgtggctgccggtgattaagaaagctgcacctccctaagtagtagcaaacgcgcgctttttagaaaaatcgatgttcagaaactg                                                                                                                   <  1:90470‑M1/250‑129 (MQ=255)
                                                                                                                                cGGTTCGATAATGCTTGTGCCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcccactttttagaaaaatcgatggtcagaaactgg                                                                                                                  >  2:407823‑M1/1‑121 (MQ=255)
                                                                                                                                     cGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagc                                                                                                            >  1:156898‑M1/1‑116 (MQ=255)
                                                                                                                                        tAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaat                                                                                                         >  2:484467‑M1/1‑113 (MQ=255)
                                                                                                                                         aaTGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTTTGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaatt                                                                                                        >  2:465080‑M1/1‑112 (MQ=255)
                                                                                                                                          aTGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagcttcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattc                                                                                                       <  1:460518‑M1/251‑141 (MQ=255)
                                                                                                                                          aTGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATATagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgcttaagaaagctgcacctacctaagtagtagcaaacgcacaatttttagaaaaatcgatgggcagaaactggcttagcaattc                                                                                                       >  2:376312‑M1/1‑111 (MQ=255)
                                                                                                                                            gCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattcc                                                                                                      <  1:115841‑M1/250‑142 (MQ=255)
                                                                                                                                                    cAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattccgttccatgg                                                                                             <  2:23991‑M1/251‑151 (MQ=255)
                                                                                                                                                                aaTACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTAGGCATCTagatatcattgataacaagcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattccgttccatggttgcttttgatt                                                                                 <  2:479935‑M1/251‑163 (MQ=255)
                                                                                                                                                                  tACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgca                                                                                                                                                   >  1:198211‑M1/1‑87 (MQ=255)
                                                                                                                                                                  tACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgca                                                                                                                                                   <  2:198211‑M1/183‑97 (MQ=255)
                                                                                                                                                                          cATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattccgttccatggttgcttttgatttacgttggcg                                                                       >  1:348640‑M1/1‑79 (MQ=255)
                                                                                                                                                                               aCAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattccgttccatggttgcttttgatttacgttggcgtctga                                                                  <  1:1022‑M1/251‑178 (MQ=255)
                                                                                                                                                                                         aaGTCAGAGCATCCAAGCCAACGGATCAGCACTATTAGCTGCCTGATGGTGGCGTTTTGCATCTagatatccttgataacaatcgatccatcaactggcctgtctaacgtggctgccggagattaagacagctgcacctacctaagtagtagcaaccgcacactttttagaaaaatcgatggtcagcacctggcttagcacttccgttccatggttgcttttgatttacgttggcgtctgatccttgcttt                                                        >  2:176875‑M1/1‑64 (MQ=255)
                                                                                                                                                                                             cAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattccgttccatggttgcttttgatttacgttggcgtctgatcattgatttatcc                                                    <  1:426206‑M1/251‑192 (MQ=255)
                                                                                                                                                                                                   agccaagccaACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCAagatatcattgataacaaacgatccatcaactggcctgtataacgtggctgccggtgcttaagaaaactgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattccgttccatggttgcttttgatttactttggcgtctgatcattggtttatcctcaaa                                               >  2:14846‑M1/1‑54 (MQ=255)
                                                                                                                                                                                                               ggATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattccgttccatggttgcttttgatttacgttggcgtctgatcattgttttatcctcaaaagcccaacctcat                                  >  2:497773‑M1/1‑42 (MQ=255)
                                                                                                                                                                                                               ggATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattccgttccatggttgcttttgatttacgttggcgtctgatcattgatttatcctcaaaagcccaacctcat                                  >  1:342565‑M1/1‑42 (MQ=255)
                                                                                                                                                                                                                          atTAGCTGACTGATGGTGGCGTTATGCATCTagatatcattgataacaatcgatccatcaacgggcctgtataacgtggctgccggtgattaagaaagctgcacctaccgaagtagtagcaaacgcacactttttagaaaaatcgatgttcagaaactggattagcaattccgttccatggttgcttttgatttacgttgtcgtctgatcattgatttatcctcaaaagcccagcctcatttgtaatgaac                       <  2:209333‑M1/251‑221 (MQ=255)
                                                                                                                                                                                                                                 gactgaTGGTGGCGGTTTGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattccgttccatggttgcttttgatttacgttggcgtctgatcattgatttatcctcaaaagcccaacctcattggtaatgaaccagctcc                <  1:465080‑M1/251‑228 (MQ=255)
                                                                                                                                                                                                                                 gactgaTGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattccgttccatggttgcttttgatttacgttggcgtctgatcattgatttatcctcaaaagcccaacctcattggtaatgaaccagctcc                >  1:124434‑M1/1‑24 (MQ=255)
                                                                                                                                                                                                                                  actgaTGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattccgttccatggttgcttttgatttacgttggcgtctgatcattgatttatcctcaaaagcccaacctcattggtaatgaaccagctccg               >  1:317767‑M1/1‑23 (MQ=255)
                                                                                                                                                                                                                                      aTGGTGGCGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattccgttccatggttgcttttgatttacgttggcgtctgatcattgatttatcctcaaaagcccaacctcattggtaatgaaccagctccgtga            >  2:385824‑M1/1‑19 (MQ=255)
                                                                                                                                                                                                                                             cGGTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagaaaaatcgatggtcagaaactggattagcaattccgttccatggttgcttttgatttacgttggcgtctgatcattgatttatcctcaaaagcccaacctcnttggtaatgaaccagctccgtgaatgtccgc    >  2:226303‑M1/1‑12 (MQ=255)
                                                                                                                                                                                                                                               gTATGCATCTagatatcattgataacaatcgatccatcaactggcctgtataacgtggctgccggtgattaagaaagctgcacctacctaagtagtagcaaacgcacactttttagcaaaatcgatggtcagaaactggattagcaattccgttccatggttgcttttgatttacgttggcgtctgatcattgatttatcctcaaaagcccaacctcattggtaatgtaccagctccgtgaatgtccgccc  >  2:3220‑M1/1‑10 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                 
CAACTGAGGTCTTTTTTTATGCCTGAAATCCAGTGTTTATCTATCTTTCCCGCTATATTAACTCTCTCAAGGTCAACCGATATCAACGTACATCTACCAACATATGTTGGTACAGATGATGGTATTTCCGGTTCGATAATGCTTGTACCAACAGGGAGGGAATACGATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTGCTTGTCCATCCAAATGGTTCTAAGTACTGGCGTTTGCAGTACCGTTATGAGGGAAAGCAAAAAATGCTGGCACTTGGGGTTTATCCTGAAATCACACTAGCGGATGCCAGAGTACGTCGTGACGAGGCGCGTAAGCTGCTTGCGAATGGCGTCGATCCGGGAGACAAAAAGAAAAATGATAAGGTTGAACAGAGTAAAGCACGAACCTTTAAAGAAGTCGCGATTGAGTGGCATGGCACC  >  NC_000913/4496509‑4496998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.