| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,756,159 | Δ33,804 bp | [intA]–[glaH] | 28 genes [intA], yfjH, alpA, yfjI, yfjJ, abpB, abpA, yfjM, rnlA, rnlB, yfjP, yfjQ, yfjR, ypjK, yfjS, yfjT, yfjU, yfjW, yfjX, yfjY, ypjJ, yfjZ, ypjF, ypjA, ypjB, ypjC, ileY, [glaH] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2756159 | 2789962 | 33804 | 60 [0] | [0] 61 | [intA]–[glaH] | [intA],yfjH,alpA,yfjI,yfjJ,abpB,abpA,yfjM,rnlA,rnlB,yfjP,yfjQ,yfjR,ypjK,yfjS,yfjT,yfjU,yfjW,yfjX,yfjY,ypjJ,yfjZ,ypjF,ypjA,ypjB,ypjC,ileY,[glaH] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2756158 | 0 (0.000) | 60 (0.920) | 53/478 | 0.1 | 100% | intergenic (+203/‑1) | ssrA/intA | tmRNA/integrase IntA |
| ? | NC_000913 | 2789963 = | 0 (0.000) | intergenic (+1/‑19) | glaH/lhgD | glutarate dioxygenase GlaH/L‑2‑hydroxyglutarate dehydrogenase | |||||
TCGACCAGTTCGTCCAGCCGAAAGACTTCGAAGAAGGCGTGTGGTTGAGCGAGCTTTCCGACGCCATTGAAACCAGCAAAGGCATTCTTTCTGTGCCCGTTCCCGTTGGCAAATTCCTGTTGATTAACAACCTGTTCTGGCTGCACGGTCGCGACCGCTTTACTCCGCACCCGGATCTGCGCCGTGAACTGATGCGCCAGCGTGGCTATTTCGCTTACGCCTCTAACCACTACCAGACGCATCAGTAAGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCG > NC_000913/2789715‑2790213 | gtgaaggatatgcggtcgggggttcaccccccgccagctccaccaaaattctccatcggtgattaccagagtcagccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgttgacgttgggccgaatcgcatggagactccccgcg < 2:165528‑M2/3‑1 (MQ=255)atgtaggaatttcggacgcgggttcaactcccgacagctccaccaacattctccatcggtgcttaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggcgactccccgcg > 1:158576‑M2/249‑251 (MQ=255) ttcggacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCACAGGAAtt > 2:82316‑M2/239‑251 (MQ=255) gcgggttccacccccgccagctcacccaaaantctccatcggtgattacccgagccatccgatgtagtcctaagagcacgcacggcgcaagccctgcgggctttttcttgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgatagtcccgacgacaagctctattgttttcgttgggcctaaacgcagggagactccccGCTCAAAGGAATTGTGCGGa < 2:236309‑M2/20‑1 (MQ=255) gggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgctaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTTAGCGGATg > 2:332496‑M2/230‑251 (MQ=255) gggttcaactcccgccagcgccaccaaaattctccatcggtgattaccagagacatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggctttgttgtgccctcaatttgtcccgcgaagtccgtagagaactaattaaatccgaaccttttagtcccattgatagtcccaacgaaacgctctattgtttacattgggcctaaacgcagtgtgactccccGCGCCAAGGAATTGAGCGGATg > 1:360089‑M2/230‑251 (MQ=255) ccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGat < 1:331015‑M2/36‑1 (MQ=255) cagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGatt > 1:225417‑M2/215‑251 (MQ=255) cagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttggcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggatactccccGCGCAAAGTAATTGATCGGATG‑TATGATTTTGTGatt < 1:143636‑M2/37‑1 (MQ=255) cccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcatggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTggcg < 1:244383‑M2/44‑1 (MQ=255) aattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTggcggcggc < 1:415983‑M2/49‑1 (MQ=255) cccatcggtgattaccagagtcagccgatgaagtcctaagagcccgcacggctcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaaggccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGcatc‑at < 2:110930‑M2/54‑1 (MQ=255) ccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCatc‑atc > 1:301739‑M2/197‑251 (MQ=255) atcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccatttataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCgg < 1:378466‑M2/57‑1 (MQ=255) ggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATNTTGTGATTATTGGCGGCGGCATC‑ATCGGCAt > 2:248654‑M2/192‑251 (MQ=255) gattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGt < 2:301739‑M2/62‑1 (MQ=255) cgagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCACAGGAATTGAGCGGATG‑TCTGATTTTGTGTTTATTGGCGGCGGCATC‑ATCGGCAGGTCCACCGcc > 2:42744‑M2/182‑251 (MQ=255) ccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACt > 1:474052‑M2/174‑251 (MQ=255) gaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACtga‑tt < 2:5958‑M2/82‑1 (MQ=255) gtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGCTG‑TATGATTTTGTGATTATTGGCGGCGGCatc‑atc > 2:87910‑M2/166‑220 (MQ=255) gtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCatc‑atc < 1:87910‑M2/55‑1 (MQ=255) ccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgacaggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGAc < 1:81427‑M2/97‑1 (MQ=255) cctgcggacttttatgtgccctcaatttgtcccgcgaagtccaaagagatctacttaaatccgaaccttttaggcccattgataggcacaacgaaaagcactattgtttacgttgggcctaaacgcagggagactccccGCCCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGTTCGCTCTGCAAC‑GACTTTATGTCTACCCGGACGCCCgcattgggctg > 2:207332‑M2/140‑246 (MQ=255) tgcgggcttttttgtgccctcaatttgtcccgcgaagtccgcagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTgcgtttct > 2:205455‑M2/138‑248 (MQ=255) gggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTgg > 1:47147‑M2/135‑250 (MQ=255) tttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCGTGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGcaaaa > 2:28119‑M2/130‑250 (MQ=255) aatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGc > 1:369882‑M2/117‑251 (MQ=255) gtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATGGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTTA‑TTGATGGCTATCCGGACGCTCGCATTGCGTTGCTGGAAAAAGATTCCGCCCCGGCCTGt < 2:277574‑M2/139‑1 (MQ=255) gcgaagtccgaagagaactaattaaatccganccgtttaggcccattgataggcccaacgaaaggctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAg < 2:225038‑M2/145‑1 (MQ=255) gcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcacaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TAAGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGGTGCTGGAAAAAGAGTCCGCCCCCGCCTGTcacccg > 2:447439‑M2/107‑249 (MQ=255) agtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGcatc‑a < 2:30360‑M2/53‑1 (MQ=255) agtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGcatc‑a > 1:30360‑M2/103‑155 (MQ=255) agtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCCTTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACgg > 1:323882‑M2/103‑251 (MQ=255) gtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACggg > 1:272324‑M2/102‑251 (MQ=255) gaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCcac > 1:141877‑M2/98‑251 (MQ=255) ctaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTg > 1:342869‑M2/90‑196 (MQ=255) ctaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTg < 2:342869‑M2/107‑1 (MQ=255) ctaattaaatccgaaccttttaggcccattgataggcccaaagaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCCTTGCGTTGCTGGACAAAGAGGCCGCCCCGGCCTGTCACCCGGCGGGCCACAACAgcgg > 2:448349‑M2/90‑251 (MQ=255) taaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctcaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TCTGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGAACGCCATGCAACTGA‑TTGATGGCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCCGTCACCCGACCGGACACCAcatcggcggg > 2:426290‑M2/86‑249 (MQ=255) aatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATc > 2:72762‑M2/83‑251 (MQ=255) atccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCCAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATACCGACGCCCGCATTGCGTTGCTGGCAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCcccaccgcggcggggtcc > 2:437479‑M2/82‑245 (MQ=255) ccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCAAGCAACTGC‑TTGCTGGCTATCCGGACGCCCGCAATGCGGTGCTGGAAAAAGAGTCCGCCCCGGCCTGGCACCAGACgggcccccacagccggggcatcca > 2:190734‑M2/80‑239 (MQ=255) tttaggcccatggataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCggg < 1:72762‑M2/178‑1 (MQ=255) gcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTAtt > 1:78217‑M2/67‑251 (MQ=255) ccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGAAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCCTC‑ATCGGCATGTCGACCGCCATGCCACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCACACGGGCCACAACAGCGGCGTGATCCATGCcggggtcccttac > 2:200715‑M2/65‑245 (MQ=255) tgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGGCTATTACAcgt > 1:231241‑M2/61‑250 (MQ=255) ccaacgaaaagttttattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGATTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTAcacgtcc < 1:326091‑M2/193‑4 (MQ=255) ccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACCACAGCGGCGTGATCCATGccgggggctattacccgtcccactcg > 2:326091‑M2/53‑239 (MQ=255) caacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCCTGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCCTTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCCCCAGACGGGCCCCAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGGCCGGCAGcc > 2:58170‑M2/52‑251 (MQ=255) acaaaaagccctatggtttccgttgggcctaaacgcagggagcccccccGCGCAAAGGAATTGAGCGG‑TGTTAGGTTTTTGTGATTTTTGGCGGCGCCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGCCGCCCGCATTGCGTTGCTGAAAAAAGAGTCCGCCCCGGCCTGTCCCCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTg < 1:82316‑M2/202‑1 (MQ=255) aagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGACGCCTGAAGgc > 2:437289‑M2/45‑251 (MQ=255) cgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGGCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGc > 1:485226‑M2/30‑251 (MQ=255) ggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGa > 1:303422‑M2/25‑250 (MQ=255) agggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTAcacgtcc > 2:182962‑M2/14‑203 (MQ=255) agggagactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTAcacgtcc < 1:182962‑M2/193‑4 (MQ=255) gactccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGGTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCCCCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGNTTTGCCTGGCGGGAAACCGCGCCACCAAAGc > 2:231221‑M2/9‑251 (MQ=255) actccccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAAACGCGCCACCAAAGcc > 1:150543‑M2/8‑251 (MQ=255) ccccGCACAAAGGAATTGAGCGGATG‑TATGATTTTGTTATTATTGGCGGCGGCACC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGATTCCGCCCCGGCCTGTCCCCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCttt < 1:308605‑M2/247‑1 (MQ=255) cccGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCCGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCtttt > 1:307277‑M2/4‑251 (MQ=255) ccGCGCAAAGGAATGGAGCGGTTG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCTTGTCGACCGCCATGCAACTGA‑TTGATGTCTACCCGGCCGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTg < 1:131084‑M2/249‑1 (MQ=255) gcgcAAGGAAATTGGGCGGATG‑TATGGTTTTNGGATTATGGGCGGCGG‑ATCCATCGCAATGTCGCCCTCCTTGCAACTGA‑TTGATGGCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCg < 2:241753/251‑1 (MQ=255) | TCGACCAGTTCGTCCAGCCGAAAGACTTCGAAGAAGGCGTGTGGTTGAGCGAGCTTTCCGACGCCATTGAAACCAGCAAAGGCATTCTTTCTGTGCCCGTTCCCGTTGGCAAATTCCTGTTGATTAACAACCTGTTCTGGCTGCACGGTCGCGACCGCTTTACTCCGCACCCGGATCTGCGCCGTGAACTGATGCGCCAGCGTGGCTATTTCGCTTACGCCTCTAACCACTACCAGACGCATCAGTAAGCGCAAAGGAATTGAGCGGATG‑TATGATTTTGTGATTATTGGCGGCGGCATC‑ATCGGCATGTCGACCGCCATGCAACTGA‑TTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCG > NC_000913/2789715‑2790213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |