| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,756,159 | Δ33,804 bp | [intA]–[glaH] | 28 genes [intA], yfjH, alpA, yfjI, yfjJ, abpB, abpA, yfjM, rnlA, rnlB, yfjP, yfjQ, yfjR, ypjK, yfjS, yfjT, yfjU, yfjW, yfjX, yfjY, ypjJ, yfjZ, ypjF, ypjA, ypjB, ypjC, ileY, [glaH] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2756159 | 2789962 | 33804 | 60 [0] | [0] 61 | [intA]–[glaH] | [intA],yfjH,alpA,yfjI,yfjJ,abpB,abpA,yfjM,rnlA,rnlB,yfjP,yfjQ,yfjR,ypjK,yfjS,yfjT,yfjU,yfjW,yfjX,yfjY,ypjJ,yfjZ,ypjF,ypjA,ypjB,ypjC,ileY,[glaH] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2756158 | 0 (0.000) | 60 (0.920) | 53/478 | 0.1 | 100% | intergenic (+203/‑1) | ssrA/intA | tmRNA/integrase IntA |
| ? | NC_000913 | 2789963 = | 0 (0.000) | intergenic (+1/‑19) | glaH/lhgD | glutarate dioxygenase GlaH/L‑2‑hydroxyglutarate dehydrogenase | |||||
ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCG > NC_000913/2755911‑2756407 | gtgaaggatatgcggtcgggggttcaccccccgccagctccACCAAAATTCTCCATCGGTGATTACCAGAGTCAGCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTGACGTTGGGCCGAATCGCATGGAGACTCCCCgcg < 2:165528‑M1/232‑4 (MQ=255)aTGTAGGAATTTCGGACGCGGGTTCAACTCCCGACAGCTCCACCAACATTCTCCATCGGTGCTTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGCGACTCCCCgcg > 1:158576‑M1/1‑248 (MQ=255) ttCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcacaggaatt > 2:82316‑M1/1‑238 (MQ=255) gcgGGTTCCACCCCCGCCAGCTCACCCAAAANTCTCCATCGGTGATTACCCGAGCCATCCGATGTAGTCCTAAGAGCACGCACGGCGCAAGCCCTGCGGGCTTTTTCTTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGTCCCGACGACAAGCTCTATTGTTTTCGTTGGGCCTAAACGCAGGGAGACTCCCCgctcaaaggaattgtgcgga < 2:236309‑M1/251‑21 (MQ=255) gggTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCTAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaatttagcggatg > 2:332496‑M1/1‑229 (MQ=255) gggTTCAACTCCCGCCAGCGCCACCAAAATTCTCCATCGGTGATTACCAGAGACATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTGTTGTGCCCTCAATTTGTCCCGCGAAGTCCGTAGAGAACTAATTAAATCCGAACCTTTTAGTCCCATTGATAGTCCCAACGAAACGCTCTATTGTTTACATTGGGCCTAAACGCAGTGTGACTCCCCgcgccaaggaattgagcggatg > 1:360089‑M1/1‑229 (MQ=255) ccAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgat < 1:331015‑M1/251‑37 (MQ=255) cAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgatt > 1:225417‑M1/1‑214 (MQ=255) cAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGGCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGATACTCCCCgcgcaaagtaattgatcggatgtatgattttgtgatt < 1:143636‑M1/251‑38 (MQ=255) cccaaAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCATGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcg < 1:244383‑M1/250‑45 (MQ=255) aaTTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggc < 1:415983‑M1/251‑50 (MQ=255) cccaTCGGTGATTACCAGAGTCAGCCGATGAAGTCCTAAGAGCCCGCACGGCTCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGGCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcat < 2:110930‑M1/250‑55 (MQ=255) ccATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatc > 1:301739‑M1/1‑196 (MQ=255) aTCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTTATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcgg < 1:378466‑M1/251‑58 (MQ=255) ggTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgatnttgtgattattggcggcggcatcatcggcat > 2:248654‑M1/1‑191 (MQ=255) gATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgt < 2:301739‑M1/250‑63 (MQ=255) cgagtCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcacaggaattgagcggatgtctgattttgtgtttattggcggcggcatcatcggcaggtccaccgcc > 2:42744‑M1/2‑181 (MQ=255) ccGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaact > 1:474052‑M1/1‑173 (MQ=255) gAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgatt < 2:5958‑M1/250‑83 (MQ=255) gTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggctgtatgattttgtgattattggcggcggcatcatc > 2:87910‑M1/1‑165 (MQ=255) gTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatc < 1:87910‑M1/220‑56 (MQ=255) ccGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGACAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggac < 1:81427‑M1/251‑98 (MQ=255) ccTGCGGACTTTTATGTGCCCTCAATTTGTCCCGCGAAGTCCAAAGAGATCTACTTAAATCCGAACCTTTTAGGCCCATTGATAGGCACAACGAAAAGCACTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcccaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgttcgctctgcaacgactttatgtctacccggacgcccgcattgggctg > 2:207332‑M1/1‑139 (MQ=255) tGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGCAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgtttct > 2:205455‑M1/1‑137 (MQ=255) gggCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctgg > 1:47147‑M1/1‑134 (MQ=255) tttttGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccgtgcaactgattgatgtctatccggacgcccgcattgcgttgctggcaaaa > 2:28119‑M1/1‑129 (MQ=255) aaTTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggc > 1:369882‑M1/1‑116 (MQ=255) gTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattatgggcggcggcatcatcggcatgtcgaccgccatgcaacttattgatggctatccggacgctcgcattgcgttgctggaaaaagattccgccccggcctgt < 2:277574‑M1/250‑140 (MQ=255) gcgAAGTCCGAAGAGAACTAATTAAATCCGANCCGTTTAGGCCCATTGATAGGCCCAACGAAAGGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccag < 2:225038‑M1/251‑146 (MQ=255) gcgAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCACAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtaagattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcggtgctggaaaaagagtccgcccccgcctgtcacccg > 2:447439‑M1/1‑106 (MQ=255) aGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgccttgcgttgctggaaaaagagtccgccccggcctgtcaccagacgg > 1:323882‑M1/1‑102 (MQ=255) aGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatca < 2:30360‑M1/155‑54 (MQ=255) aGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatca > 1:30360‑M1/1‑102 (MQ=255) gTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacggg > 1:272324‑M1/1‑101 (MQ=255) gAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccac > 1:141877‑M1/1‑97 (MQ=255) cTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattg > 1:342869‑M1/1‑89 (MQ=255) cTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattg < 2:342869‑M1/196‑108 (MQ=255) cTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAAAGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgccttgcgttgctggacaaagaggccgccccggcctgtcacccggcgggccacaacagcgg > 2:448349‑M1/1‑89 (MQ=255) taaaatcCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTCAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtctgattttgtgattattggcggcggcatcatcggcatgtcgaacgccatgcaactgattgatggctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcccgtcacccgaccggacaccacatcggcggg > 2:426290‑M1/3‑85 (MQ=255) aaTCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatc > 2:72762‑M1/1‑82 (MQ=255) aTCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgccaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctataccgacgcccgcattgcgttgctggcaaaagagtccgccccggcctgtcaccagacgggcccccaccgcggcggggtcc > 2:437479‑M1/1‑81 (MQ=255) ccGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccaagcaactgcttgctggctatccggacgcccgcaatgcggtgctggaaaaagagtccgccccggcctggcaccagacgggcccccacagccggggcatcca > 2:190734‑M1/1‑79 (MQ=255) tttAGGCCCATGGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggg < 1:72762‑M1/249‑179 (MQ=255) gCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctatt > 1:78217‑M1/1‑66 (MQ=255) ccATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgaaaaggaattgagcggatgtatgattttgtgattattggcggcggcctcatcggcatgtcgaccgccatgccactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccacacgggccacaacagcggcgtgatccatgccggggtcccttac > 2:200715‑M1/1‑64 (MQ=255) tGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccgggggctattacacgt > 1:231241‑M1/1‑60 (MQ=255) ccAACGAAAAGTTTTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagattccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtcc < 1:326091‑M1/245‑194 (MQ=255) ccAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccaccacagcggcgtgatccatgccgggggctattacccgtcccactcg > 2:326091‑M1/1‑52 (MQ=255) cAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcctgtcgaccgccatgcaactgattgatgtctatccggacgcccgccttgcgttgctggaaaaagagtccgccccggcctgtccccagacgggccccaacagcggcgtgatccatgccggggtctattacacggccggcagcc > 2:58170‑M1/1‑51 (MQ=255) acaaaaagccCTATGGTTTCCGTTGGGCCTAAACGCAGGGAGCCCCCCCgcgcaaaggaattgagcggtgttaggtttttgtgatttttggcggcgccatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggccgcccgcattgcgttgctgaaaaaagagtccgccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctg < 1:82316‑M1/248‑203 (MQ=255) aaGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggacgcctgaaggc > 2:437289‑M1/1‑44 (MQ=255) cGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccgggggctattacacgtccggcagcctgaaggcgcagttttgcctggc > 1:485226‑M1/1‑29 (MQ=255) ggCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcggga > 1:303422‑M1/1‑24 (MQ=255) aGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtcc > 2:182962‑M1/1‑13 (MQ=255) aGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtcc < 1:182962‑M1/206‑194 (MQ=255) gaCTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcggtgctggaaaaagagtccgccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagntttgcctggcgggaaaccgcgccaccaaagc > 2:231221‑M1/1‑8 (MQ=255) aCTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaacgcgccaccaaagcc > 1:150543‑M1/1‑7 (MQ=255) ccccgcacaaaggaattgagcggatgtatgattttgttattattggcggcggcaccatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagattccgccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgccaccaaagccttt < 1:308605‑M1/251‑248 (MQ=255) cccgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgccgttttgcctggcgggaaaccgcgccaccaaagcctttt > 1:307277‑M1/1‑3 (MQ=255) ccgcgcaaaggaatggagcggttgtatgattttgtgattattggcggcggcatcatcggcttgtcgaccgccatgcaactgattgatgtctacccggccgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgccaccaaagccttttg < 1:131084‑M1/251‑250 (MQ=255) | ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAATTTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCG > NC_000913/2755911‑2756407 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |