Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	2,286,390	Δ3,880 bp		[yejO]–yejO	[yejO], insH8, yejO

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2286390	2290269	3880	54 [0]	[0] 54	[yejO]–yejO	[yejO],insH8,yejO

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2286389	0 (0.000)	54 (0.830)	52/476	0.1	100%	intergenic (+102/+1)	proL/yejO	tRNA‑Pro/adhesin‑like autotransporter YejO
	?	NC_000913	2290270 =	0 (0.000)					intergenic (‑90/‑230)	yejO/narP	adhesin‑like autotransporter YejO/DNA‑binding transcriptional dual regulator NarP

ATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTA  >  NC_000913/2286143‑2286633                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     ataAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAact                                                                                                                                                                                                                                                   <  1:360107‑M1/250‑4 (MQ=255)   aaaTCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACANATCACAGCCTGTTTATTTTCTGTTAactgtt                                                                                                                                                                                                                                                >  2:249888‑M1/1‑245 (MQ=255)     aTCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgttt                                                                                                                                                                                                                                               >  2:114077‑M1/1‑243 (MQ=255)           tAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaa                                                                                                                                                                                                                                         >  2:386133‑M1/1‑237 (MQ=255)                        tACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtatt                                                                                                                                                                                                                            <  1:490267‑M1/250‑27 (MQ=255)                              cAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattg                                                                                                                                                                                                                     >  1:262227‑M1/1‑218 (MQ=255)                              cAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgc                                                                                                                                                                                                                                     <  2:182078‑M1/235‑18 (MQ=255)                              cAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgc                                                                                                                                                                                                                                     >  1:182078‑M1/1‑218 (MQ=255)                               aaTCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGATGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattg                                                                                                                                                                                                                     >  1:160466‑M1/1‑217 (MQ=255)                                aTCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGACGGAACGTAGCGCAGCCTGGGAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGAACAAAAATCCCAAGAAAAAACCAACCCTTAAGGTTGGTTTTTTTATATCTGCACTTACTTCGCTAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAaatntttaaagaaatgcacccgtattgtgattgat                                                                                                                                                                                                                   >  2:218655‑M1/1‑216 (MQ=255)                                    gtgtGGAAAACGTTAGTATTAGCCGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCGCGTGCCGACCAAAAATCCCAATAAAAAACCAACCCTTGCGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTTTTAactgtttaaagaaatgcacaaatattgtgattgattttt                                                                                                                                                                                                               <  2:465781‑M1/251‑40 (MQ=255)                                              cGGTAGTATGAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttt                                                                                                                                                                                                     <  2:154332‑M1/251‑50 (MQ=255)                                                                     cGGCTCGTAGCGCAGCCTGGTAGCGCACCGTCACGGGGTGACGGGGGTCGGAGGTTAAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTCTATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTCTTTTCTGTTAactgtttaaagaaatgcccaagtattgtgattgattttttagttgtttttcttgatgagacgctgatgaaa                                                                                                                                                                               >  2:289648‑M1/1‑179 (MQ=255)                                                                               cgcAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCCAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgaggagctgatgcaaaattccgtctt                                                                                                                                                                    >  1:386889‑M1/1‑169 (MQ=255)                                                                                        gTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaa                                                                                                                                                           <  2:79528‑M1/251‑92 (MQ=255)                                                                                                  gTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaat                                                                                                                                                                            <  1:94780‑M1/224‑75 (MQ=255)                                                                                                  gTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaat                                                                                                                                                                            >  2:94780‑M1/1‑150 (MQ=255)                                                                                                  gTCATGGGGGGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAGAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgcca                                                                                                                                                 <  2:328649‑M1/251‑102 (MQ=255)                                                                                                    cATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaa                                                                                                                                               <  1:474573‑M1/251‑104 (MQ=255)                                                                                                    cATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttga                                                                                                                                                                                               <  1:434908‑M1/203‑56 (MQ=255)                                                                                                    cATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttga                                                                                                                                                                                               >  2:434908‑M1/1‑148 (MQ=255)                                                                                                     aTGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCGTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaag                                                                                                                                              <  2:386789‑M1/251‑105 (MQ=255)                                                                                                       ggggTGTCGGGGGTCGGAGGTTCAAATCCCNTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataattaaaatgatgccaaagc                                                                                                                                             <  2:220066‑M1/250‑106 (MQ=255)                                                                                                         ggTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcga                                                                                                                                           >  1:181609‑M1/1‑143 (MQ=255)                                                                                                              cGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgac                                                                                                                                      <  1:320680‑M1/250‑113 (MQ=255)                                                                                                                      ggAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgt                                                                                                                              >  1:27273‑M1/1‑130 (MQ=255)                                                                                                                                  ccTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactac                                                                                                                  <  1:114077‑M1/250‑133 (MQ=255)                                                                                                                                     ctcGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgt                                                                                                              >  2:311284‑M1/1‑115 (MQ=255)                                                                                                                                                       cccAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaactacaaggttgtagttttcactacatgtccatacataaaatggggt                                                                                            <  1:302599‑M1/251‑155 (MQ=255)                                                                                                                                                          aaGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaac                                                                                         <  2:262227‑M1/251‑158 (MQ=255)                                                                                                                                                            gAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacat                                                                                       >  1:119630‑M1/1‑92 (MQ=255)                                                                                                                                                            gAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacat                                                                                       <  1:311284‑M1/251‑160 (MQ=255)                                                                                                                                                              aaaaaCCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattc                                                                                     <  1:18689‑M1/251‑162 (MQ=255)                                                                                                                                                              aaaaaCCAACCCTTACGGTTGGTTTTTGTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattc                                                                                     >  2:52322‑M1/1‑90 (MQ=255)                                                                                                                                                                  accaaccCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgc                                                                                 >  2:23753‑M1/1‑86 (MQ=255)                                                                                                                                                                      accCTTACGGTTGGTTTTTTTAAATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaacgcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcct                                                                             >  2:352210‑M1/1‑82 (MQ=255)                                                                                                                                                                         cTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggt                                                                          >  1:345568‑M1/1‑79 (MQ=255)                                                                                                                                                                             cGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcg                                                                      <  1:449527‑M1/251‑177 (MQ=255)                                                                                                                                                                             cGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcg                                                                      >  1:167311‑M1/1‑75 (MQ=255)                                                                                                                                                                              ggttggttTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcgt                                                                     >  2:259214‑M1/1‑74 (MQ=255)                                                                                                                                                                               gttggttTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcgtt                                                                    <  1:386133‑M1/251‑179 (MQ=255)                                                                                                                                                                                        tttATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgatttttt                                                                                                                                                                                                              <  1:421126‑M1/104‑41 (MQ=255)                                                                                                                                                                                        tttATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgatttttt                                                                                                                                                                                                              >  2:421126‑M1/1‑64 (MQ=255)                                                                                                                                                                                         ttATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcgttaccaacgct                                                           >  1:13187‑M1/1‑63 (MQ=255)                                                                                                                                                                                                 gCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcgttaccaacgctacgctc                                                     <  2:369767‑M1/248‑194 (MQ=255)                                                                                                                                                                                                  cAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgaacaagtattgagattgattttttagtggtttttcttgctgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagatttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcgttaccaacgctacgctcaaac                                                 >  1:467968‑M1/1‑54 (MQ=255)                                                                                                                                                                                                   aattaattCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcgttaccaacgctacgctcaaaca                                                <  1:259214‑M1/251‑199 (MQ=255)                                                                                                                                                                                                       aattCGATAAAAAGACCGTGACACACCACAGCCGGTTTATTTTCTGTTAactggttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgataagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcgttaccaacgctacgctcaaacataat                                            <  2:16707‑M1/251‑203 (MQ=255)                                                                                                                                                                                                               aaaCAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcgttaccaacgctacgctcaaacataatgattcta                                     >  2:66246‑M1/1‑41 (MQ=255)                                                                                                                                                                                                               aaaCAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcgttaccaacgctacgctcaaacataatgattcta                                     >  2:99585‑M1/1‑41 (MQ=255)                                                                                                                                                                                                                   aGACCGTGACACAGCACAGCCTGTTTATTTTCTGTTAactgtttaaagtaatgctcaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaagtccgtctttataatgaaaatgatgtcaaatcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattctcgcgcctggtagcgttaccaacgctacgctcaaccataatgattcgaataaa                                <  2:309473‑M1/251‑215 (MQ=255)                                                                                                                                                                                                                      ccGTGACACATCACAGCCTGTTTATTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcgttaccaacgctacgctcaaacataatgattctaataaaacc                             <  2:263904‑M1/251‑218 (MQ=255)                                                                                                                                                                                                                                             aTTTTCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcgttaccaacgctacgctcaaacataatgattctaataaaacctcaggagactactatgcctgaag      <  1:349495‑M1/251‑241 (MQ=255)                                                                                                                                                                                                                                                 tCTGTTAactgtttaaagaaatgcacaagtattgtgattgattttttagttgtttttcttgatgagaagctgatgcaaaattccgtctttataatgaaaatgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatggggtaacattcacgcgcctggtagcgttaccaacgctacgctcaaacataatgattctaataaaacctcaggagactactatgcctgaagcaac  >  1:83574‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     ATAAATCAGTTAGCGAAATATCTTACTTGCAATCGGTGTGGAAAACGGTAGTATTAGCAGCCACGAGTCGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAAATCCCAAGAAAAAACCAACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTAGAATCGGCGTATTCCTGACGCACGGCCGCTTTCAGCCAGGGTTCCAGCGTCGTA  >  NC_000913/2286143‑2286633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑