| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,825,796 | Δ4,947 bp | srlA–[gutQ] | srlA, srlE, srlB, srlD, gutM, srlR, [gutQ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2825796 | 2830742 | 4947 | 36 [0] | [0] 36 | srlA–[gutQ] | srlA,srlE,srlB,srlD,gutM,srlR,[gutQ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2825795 | 0 (0.000) | 36 (0.590) | 32/494 | 0.5 | 100% | intergenic (‑219/‑37) | mltB/srlA | membrane‑bound lytic murein transglycosylase B/sorbitol‑specific PTS enzyme IIC2 component |
| ? | NC_000913 | 2830743 = | 0 (0.000) | coding (931/966 nt) | gutQ | D‑arabinose 5‑phosphate isomerase GutQ | |||||
GGTCTGGGGCTGGTGGCGGTATGTGACGCTCAACAACAGGTACAAGGCGTCTTTACCGACGGCGATTTACGTCGCTGGCTGGTTGGCGGCGGCGCACTCACCACGCCAGTCAATGAAGCGATGACGGTCGGCGGCACCACGTTGCAATCGCAAAGTCGCGCCATCGACGCCAAAGAGATCCTGATGAAGCGCAAAATCACTGCCGCACCGGTGGTGGATGAAAACGGCAAACTCACCGGCGCAATAAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGGAACGCTTCTGTCGCTTCACGCAGGTTTTGCTTAACAACGGGCACCGCCGCCACTTCTGGCGTCGGCAACGTCACCTCAGGAAAAGC > NC_000913/2830497‑2830987 | caatgttacataacgacgcttgaacatgaggggtccatttaacagattcaaccaggggcaagtatggtaaagcatcacgccccgcacaaggaagcggtagtcactgcccgatacggactttacataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCt < 2:386655‑M2/5‑1 (MQ=255) ataacgacgcttgaacatgaggggtccatttaacagattcaaccaggggcaagtatggtaaagcatcacgccccgcacaaggaagcggtagtcactgcccgatacggactttacataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacactgttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGAttt < 1:423600‑M2/14‑1 (MQ=255) acgacgcttgaacatgaggggtccatttaacagattcaaccaggggcaagtatggtaaagcatcacgccccgcacaaggaagcggtagtcactgcccgatacggactttacataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCt > 2:147958‑M2/235‑250 (MQ=255) gacgcttgaacatgaggggtccatttaacagattcaaccaggggcaagtatggtaaagcatcacgccccgcacaaggaagcggtagtcactgcccgatacggactttacataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATc > 1:30181‑M2/233‑251 (MQ=255) cttgaacatgaggggtccatttaacagattcaaccaggggcaagtatggtaaagcatcacgccccgcacaaggaagcggtagtcactgcccgatacggactttacataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGc > 1:169352‑M2/229‑251 (MQ=255) gaacatgaggggtccatttaacagagtcaaccttgggcaagtacggtaaagcatcacgccccgcacaaggaagcggtagtcacagcccgatactgactttccataactcaactcattcccctcgctatccttttattcaaactctcaaattaaaatatttatctttcattttgcgatcaaaataacactttaaaatctttcaatctgattagattaggttgccatAACCTGTACGATTTCTTtcaggact < 2:151512‑M2/25‑4 (MQ=255) atgaggggtccatttaacagattcaaccaggggcaagtatggtaaagcatcacgccccgcacaaggaagcggtagtcactgcccgatacggactttacataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGatt > 1:214036‑M2/222‑251 (MQ=255) cagattcaaccaggggcaagtatggtaaagcatcacgccccgcacaaggaagcggtagtcactgcccgatacggactttacataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATcc > 1:178223‑M2/205‑251 (MQ=255) aagtatggtaaagcatcacgccccgcacaaggaagcggtagtcactgcccgatacggactttacataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTcgcccgcc > 2:362067‑M2/188‑251 (MQ=255) ggtaaagcatcactccccgcaaaaggaagcggtagtcactgcacgatacggactttacataactcaactcattcccctcgctatccttttattcaaacttgcaaattaaaatattttgctttctttttgcgatcaaaataactcttttaaatctttcaagctgattagattaggttgccttCACCTGCAGGATTTCTATCAGGCCGGGATTCTTTAATCCTTCGATCCCAGACGTTTCGCCAGCCGATGCa < 2:443406‑M2/70‑1 (MQ=255) agcatcacgccccgcacaaggaagcggtagtcactgcccgatacggactttacataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTg < 2:30119‑M2/75‑1 (MQ=255) cgcacaaggacgcgttagtctctgcccgatacggacttttcataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtATCCTGCAGGTTTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCATGTTGGCGTCGTCGGtt < 2:372632‑M2/87‑1 (MQ=255) gcacaaggaagcggtagtcactgcccgatacggactttacataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaagctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGttt < 2:2648‑M2/88‑1 (MQ=255) ggtagtcactgtccgatacggagtttacataactcaaatcattcccctggctatacttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTGCAATCACAGAAGTTTCGCCAGCCGCTGCAGGTTGGCGACGTCGGTTTCCAGCCTCcgcg > 2:76643‑M2/152‑251 (MQ=255) gatacggactttccataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCATGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCagccccg > 2:90471‑M2/138‑249 (MQ=255) actttacataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGtgat > 1:150356‑M2/131‑251 (MQ=255) actttacataactcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTAAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGTCGACGTCGGTTTCCAGCATCCTCGCCCAGGCAGCCCAGTTTtgat > 2:284865‑M2/131‑251 (MQ=255) cattacgcaactcattcccctcgctatccgtttatgcaaactttcaaattaaaatatttatctttcatttggcgatcaaaataacgcttgtaaatctttgaatctgtttagattaggttcccgtACACTGCAGGATATCTATCAGGCGGGAATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGGTTGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCTGGTTGTGATGAtttt < 2:451706‑M2/127‑1 (MQ=255) actcaactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGc > 1:176254‑M2/121‑251 (MQ=255) caactcattcccctcgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGcc > 1:104742‑M2/118‑249 (MQ=255) cgctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAAt > 1:302781‑M2/104‑249 (MQ=255) gctatccttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGCCGAATAGt > 2:41668‑M2/103‑251 (MQ=255) ttttattcaaactttcaaattaaaatatttatctttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGc > 1:144351‑M2/96‑251 (MQ=255) acatatttatctttcattttgcgatcaaactaacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGCTTTCTATCAGTCCGGGATTATTTAATCCTTCACTCCCAGACGTTTCGCCATCCGATGCAGGTTGGCGAGGTCGGTTACCAGCATCCGCGCGCAGGCAGCCCAGTTGTCATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGGAACGCTTCTGTCTCttccc > 2:442801‑M2/74‑249 (MQ=255) ttcattttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtACCCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGGAACGCTTCTGTCGCTTCACGCAGGtttt < 2:178223‑M2/187‑1 (MQ=255) cattttgcgttgaaaataacacttttaaatctttcaatctgattagattaggttgccttAACCTGCAGGATTTCTCTCAGTCCGGGATTATTTAATCCTTCATTCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCAGCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGGATCGCTTCTGTCGCTTCCCGCAGGTTTTGCTTa < 2:267848‑M2/192‑1 (MQ=255) tttgcgatcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGTAACGCTTCTGTCGCTTCACGCAGGTTTTGCTTaac > 2:83617‑M2/57‑250 (MQ=255) atcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGGAACGCTTCTGTCGCTTCACGCAGGt < 1:57160‑M2/184‑1 (MQ=255) atcaaaataacacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGGAACGCTTCTGTCGCTTCACGCAGGt > 2:57160‑M2/51‑234 (MQ=255) acacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGGAACGCTTCTGTCGCTTCACGCAGGTTTTGCTTAACAACGGGCACCgccgcc > 1:410262‑M2/42‑251 (MQ=255) acacttttaaatctttcaatctgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGGAACGCTTCTGTCGCTTCACGCAGGTTTTGCTTAACAACGGGCACCgccgcc > 1:55688‑M2/42‑251 (MQ=255) tttcaatttgattagattaggttgccgtAACCTGCAGGATTTCTATCTGGCCGGGATTATTTAATCCTTCACTCCCAGACGTGTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTGGTGATGATTTTGTGCCAGTGTCTGACGAAT‑GTTTCCACGCGGGAACGCTTCTGTCGCTTCACTCAGGTTTTGCTTAACAACGGGCACCGCCGCCACTTCTGGCGTc < 2:381337‑M2/222‑1 (MQ=255) tgattagattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGGAACGCTTCTGTCGCTTCACGCAGGTTTTGCTTAACAACGGGCACCGCCGCCACTTCTGGCGTCGGCAACGTc > 1:33145‑M2/21‑251 (MQ=255) agattaggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGGAACGCTTCTGTCGCTTCACGCAGGTTTTGCTTAACAACGGGCACCGCCGCCACTTCTGGCGTCGGCAACGTCACCTc > 1:273879‑M2/16‑251 (MQ=255) aggttgccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGGAACGCTTCTGTCGCTTCACGCAGGTTTTGCTTAACAACGGGCACCGCCGCCACTTCTGGCGTCGGCAACGTCCCCTCAGGa > 1:333080‑M2/11‑250 (MQ=255) gccgtAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGGAACGCTTCTGTCGCTTCACGCAGGTTTTGCTTAACAACGGGCACCGCCGCCACTTCTGGCGTCGGCAACGTCACCTCAGGAAAAGc > 1:27081‑M2/6‑250 (MQ=255) | GGTCTGGGGCTGGTGGCGGTATGTGACGCTCAACAACAGGTACAAGGCGTCTTTACCGACGGCGATTTACGTCGCTGGCTGGTTGGCGGCGGCGCACTCACCACGCCAGTCAATGAAGCGATGACGGTCGGCGGCACCACGTTGCAATCGCAAAGTCGCGCCATCGACGCCAAAGAGATCCTGATGAAGCGCAAAATCACTGCCGCACCGGTGGTGGATGAAAACGGCAAACTCACCGGCGCAATAAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAATCCTTCAATCCCAGACGTTTCGCCAGCCGATGCAGGTTGGCGACGTCGGTTTCCAGCATCCGCGCGCAGGCAGCCCAGTTGTGATGATTTTGTGCCAGTGCCTGACGAATAGTTT‑CACGCTGGAACGCTTCTGTCGCTTCACGCAGGTTTTGCTTAACAACGGGCACCGCCGCCACTTCTGGCGTCGGCAACGTCACCTCAGGAAAAGC > NC_000913/2830497‑2830987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |