| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,825,796 | Δ4,947 bp | srlA–[gutQ] | srlA, srlE, srlB, srlD, gutM, srlR, [gutQ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2825796 | 2830742 | 4947 | 36 [0] | [0] 36 | srlA–[gutQ] | srlA,srlE,srlB,srlD,gutM,srlR,[gutQ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2825795 | 0 (0.000) | 36 (0.590) | 32/494 | 0.5 | 100% | intergenic (‑219/‑37) | mltB/srlA | membrane‑bound lytic murein transglycosylase B/sorbitol‑specific PTS enzyme IIC2 component |
| ? | NC_000913 | 2830743 = | 0 (0.000) | coding (931/966 nt) | gutQ | D‑arabinose 5‑phosphate isomerase GutQ | |||||
CAATGTTACATAACGACGCTTGAACATGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTTTGGTAATAAAACAATAAATCCTGAAGGAGAGAACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACGCACTGATTAATTTTATCGGTCAGCATCGTATTGAACGTTTTGCTCAACGTTGCGCCGGTAACCCTGTTTCCCGTTACCTACT > NC_000913/2825550‑2826040 | cAATGTTACATAACGACGCTTGAACATGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacct < 2:386655‑M1/251‑6 (MQ=255) aTAACGACGCTTGAACATGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTGTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggattt < 1:423600‑M1/251‑15 (MQ=255) acgacgCTTGAACATGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttct > 2:147958‑M1/1‑234 (MQ=255) gacgCTTGAACATGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatc > 1:30181‑M1/1‑232 (MQ=255) cTTGAACATGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggc > 1:169352‑M1/1‑228 (MQ=255) gAACATGAGGGGTCCATTTAACAGAGTCAACCTTGGGCAAGTACGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACAGCCCGATACTGACTTTCCATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTCTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTAAAATCTTTCAATCTGATTAGATTAGGTTGCCATaacctgtacgatttctttcaggact < 2:151512‑M1/250‑26 (MQ=255) aTGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggatt > 1:214036‑M1/1‑221 (MQ=255) cAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcc > 1:178223‑M1/1‑204 (MQ=255) aaGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgcccgcc > 2:362067‑M1/1‑187 (MQ=255) ggTAAAGCATCACTCCCCGCAAAAGGAAGCGGTAGTCACTGCACGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTGCAAATTAAAATATTTTGCTTTCTTTTTGCGATCAAAATAACTCTTTTAAATCTTTCAAGCTGATTAGATTAGGTTGCCTTcacctgcaggatttctatcaggccgggattctttaatccttcgatcccagacgtttcgccagccgatgca < 2:443406‑M1/251‑71 (MQ=255) aGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttg < 2:30119‑M1/251‑76 (MQ=255) cGCACAAGGACGCGTTAGTCTCTGCCCGATACGGACTTTTCATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTatcctgcaggttttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcatgttggcgtcgtcggtt < 2:372632‑M1/251‑88 (MQ=255) gCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAAGCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggttt < 2:2648‑M1/251‑89 (MQ=255) ggTAGTCACTGTCCGATACGGAGTTTACATAACTCAAATCATTCCCCTGGCTATACTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatcctgcaatcacagaagtttcgccagccgctgcaggttggcgacgtcggtttccagcctccgcg > 2:76643‑M1/1‑151 (MQ=255) gATACGGACTTTCCATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcatgccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagccccg > 2:90471‑M1/1‑137 (MQ=255) aCTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgat > 1:150356‑M1/1‑130 (MQ=255) aCTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttaaatcccagacgtttcgccagccgatgcaggttgtcgacgtcggtttccagcatcctcgcccaggcagcccagttttgat > 2:284865‑M1/1‑130 (MQ=255) cattacgcaactcattcccctCGCTATCCGTTTATGCAAACTTTCAAATTAAAATATTTATCTTTCATTTGGCGATCAAAATAACGCTTGTAAATCTTTGAATCTGTTTAGATTAGGTTCCCGTacactgcaggatatctatcaggcgggaattatttaatccttcaatcccagacgtttcgccagccgatgcagggttgcgacgtcggtttccagcatccgcgcgcaggcagcctggttgtgatgatttt < 2:451706‑M1/244‑128 (MQ=255) actcaactcaTTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgc > 1:176254‑M1/1‑120 (MQ=255) caactcaTTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgcc > 1:104742‑M1/1‑117 (MQ=255) cGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaat > 1:302781‑M1/1‑103 (MQ=255) gCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgccgaatagt > 2:41668‑M1/1‑102 (MQ=255) ttttATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgc > 1:144351‑M1/1‑95 (MQ=255) acatatttATCTTTCATTTTGCGATCAAACTAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggctttctatcagtccgggattatttaatccttcactcccagacgtttcgccatccgatgcaggttggcgaggtcggttaccagcatccgcgcgcaggcagcccagttgtcatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtctcttccc > 2:442801‑M1/3‑73 (MQ=255) ttCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaccctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggtttt < 2:178223‑M1/248‑188 (MQ=255) cATTTTGCGTTGAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCTTaacctgcaggatttctctcagtccgggattatttaatccttcattcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcagccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggatcgcttctgtcgcttcccgcaggttttgctta < 2:267848‑M1/251‑193 (MQ=255) tttGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctgtaacgcttctgtcgcttcacgcaggttttgcttaac > 2:83617‑M1/1‑56 (MQ=255) aTCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggt < 1:57160‑M1/234‑185 (MQ=255) aTCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggt > 2:57160‑M1/1‑50 (MQ=255) acacTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaacaacgggcaccgccgcc > 1:410262‑M1/1‑41 (MQ=255) acacTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaacaacgggcaccgccgcc > 1:55688‑M1/1‑41 (MQ=255) tttCAATTTGATTAGATTAGGTTGCCGTaacctgcaggatttctatctggccgggattatttaatccttcactcccagacgtgtcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagtggtgatgattttgtgccagtgtctgacgaatgtttccacgcgggaacgcttctgtcgcttcactcaggttttgcttaacaacgggcaccgccgccacttctggcgtc < 2:381337‑M1/250‑223 (MQ=255) tGATTAGATTAGGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaacaacgggcaccgccgccacttctggcgtcggcaacgtc > 1:33145‑M1/1‑20 (MQ=255) agattagGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaacaacgggcaccgccgccacttctggcgtcggcaacgtcacctc > 1:273879‑M1/1‑15 (MQ=255) agGTTGCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaacaacgggcaccgccgccacttctggcgtcggcaacgtcccctcagga > 1:333080‑M1/1‑10 (MQ=255) gCCGTaacctgcaggatttctatcaggccgggattatttaatccttcaatcccagacgtttcgccagccgatgcaggttggcgacgtcggtttccagcatccgcgcgcaggcagcccagttgtgatgattttgtgccagtgcctgacgaatagtttcacgctggaacgcttctgtcgcttcacgcaggttttgcttaacaacgggcaccgccgccacttctggcgtcggcaacgtcacctcaggaaaagc > 1:27081‑M1/1‑5 (MQ=255) | CAATGTTACATAACGACGCTTGAACATGAGGGGTCCATTTAACAGATTCAACCAGGGGCAAGTATGGTAAAGCATCACGCCCCGCACAAGGAAGCGGTAGTCACTGCCCGATACGGACTTTACATAACTCAACTCATTCCCCTCGCTATCCTTTTATTCAAACTTTCAAATTAAAATATTTATCTTTCATTTTGCGATCAAAATAACACTTTTAAATCTTTCAATCTGATTAGATTAGGTTGCCGTTTGGTAATAAAACAATAAATCCTGAAGGAGAGAACAATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACGCACTGATTAATTTTATCGGTCAGCATCGTATTGAACGTTTTGCTCAACGTTGCGCCGGTAACCCTGTTTCCCGTTACCTACT > NC_000913/2825550‑2826040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |