New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1799821	114 (1.050)	3 (0.030)	3/496	8.0	2.6%	coding (179/198 nt)	rpmI	50S ribosomal subunit protein L35
	?	NC_000913	= 2094829	113 (1.040)					coding (295/591 nt)	hisH	imidazole glycerol phosphate synthase subunit HisH
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACGCGAGAACGCGCACCGTAGTAGCCTTTAGCTTGTTTCAAAATTTTCTTGTGACGTGCACGTGCAATAACACCACGTTTTACGCGAGCCATATGTGCTCTCCTGTATCTATATTCTAATTAAAAAGTTAAAAACGTTAACGGCTTATGCGTACGGCAGGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1799658‑1799821 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGATGCCCAGCAAGTCGACGCCGTTGCTCTCTTCGCTGCGCCGCCCCAGCAGTTGCATCCCTAAGCAGATGCCCAGCACCGGTTGGGTACAGGCTTTGATGAGATCAAACAGCTCGCGCTCACGTACCTGATCCATCGCCGCTTGCGCAGTGCCAACGCCGGGTAAAAACAGTTTATCGGCCAGCAACACGACGTCCGGGTCACGGCTGACTTTGGGTTCATAACCGTGACGCGCAATGGCAGACTT  <  NC_000913/2094829‑2094583                                                                                                                                                                                                                                                                                                                                                                                                                             ACGCGAGAACGCGCACCGTAGTAGCCTTTAGCTTGTTTCAAAATTTTCTTGTGACGTGCACGTGCAATAACACCACGTTTTACGCGAGCCATATGTGCTCTCCTGTATCTATATTCTAATTAAAAAGTTAAAAACGTTAACGGCTTATGCGTACGGCAGGCACGTGATGCCCAGCAAGTCGACGCCGTTGCTCTCTTCGCTGCGCCGCCCCAGCAGTTGCATCCCTAAGCAGATGCCCAGCACCGGTTGGG                                                                                                                                                                  >  1:572866/1‑251                                                                                         CCATATGTGCTCTCCTGTATCTATATTCTAATTAAAAAGTTAAAAACGTCAACGGCTTATGCGTACGGCAGGCACGTGATGCCCAGCAAGTCGACGCCGTTGCTCTCTTCGCTGCGCCGCCCCAGCAGTTGCATCCCTAAGCAGATGCCCAGCACCGGTTGGGTACAGGCTTTGATGAGATCAAACAGCTCGCGCTCACGTACCTGATCCATCGCCGCTTGCGCAGTGCCAACGCCGGGTAAAAACAGTTT                                                                          <  2:572866/251‑1                                                                                                                                                                 gcgGTGATGCCCAGCAAGGCGACGCCGTTTGTCTGTTCGCTGCGCCGCCCCAGCAGTTGCATCCCGAAGCAGATGCCCAGCCCCGGTTGGGTACAGGCTTTGATGAGATCAAACAGCTCGCGCTCACGTACCTGATCCATCGCCGCGTGCGCAGTGCCAACGCCGGGTAAAATCAGTGTATCGGCAAGCAACACGACGTCCGGGTCACGGCTGACTTTGGGTTCATAGCCGTTACGCGCAATGGCAGTCTT  <  2:633905/248‑1                                                                                                                                                                                                                                                                                                                                                                                                                             ACGCGAGAACGCGCACCGTAGTAGCCTTTAGCTTGTTTCAAAATTTTCTTGTGACGTGCACGTGCAATAACACCACGTTTTACGCGAGCCATATGTGCTCTCCTGTATCTATATTCTAATTAAAAAGTTAAAAACGTTAACGGCTTATGCGTACGGCAGGCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1799658‑1799821 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGATGCCCAGCAAGTCGACGCCGTTGCTCTCTTCGCTGCGCCGCCCCAGCAGTTGCATCCCTAAGCAGATGCCCAGCACCGGTTGGGTACAGGCTTTGATGAGATCAAACAGCTCGCGCTCACGTACCTGATCCATCGCCGCTTGCGCAGTGCCAACGCCGGGTAAAAACAGTTTATCGGCCAGCAACACGACGTCCGGGTCACGGCTGACTTTGGGTTCATAACCGTGACGCGCAATGGCAGACTT  <  NC_000913/2094829‑2094583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.