Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,707,484 IS3 (+) +3 bp coding (220‑222/1608 nt) dppA ← dipeptide ABC transporter periplasmic binding protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2170171 =NA (NA)44 (0.840) 44/482 0.2 100% noncoding (1/1258 nt) IS3 repeat region
?NC_000913 = 3707486 0 (0.000)coding (220/1608 nt) dppA dipeptide ABC transporter periplasmic binding protein
* ? NC_000913 = 2171428NA (NA)35 (0.660) 34/486 0.4 100% noncoding (1258/1258 nt) IS3 repeat region
?NC_000913 3707484 = 0 (0.000)coding (222/1608 nt) dppA dipeptide ABC transporter periplasmic binding protein

TTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTGCTCCAATTGTGATGTTT  >  NC_000913/3707238‑3707729
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     
tttCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGACACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtg                                                                                                                                                                                                                                                   <  2:141081‑M2/251‑3 (MQ=255)
       aaaaagggttctgctacgagaatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgggattacaagcggtggcggcggcacagtgggtgtggcggcctcagtccggaacaatgtgaaaacaagaaccgggcttaggcctgggtccatatgacgtgggtagtatcaCACTTCggtggt                                                                                                                                                                                                                                            <  2:237424‑M2/12‑1 (MQ=255)
        aaaaggttgctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtacggaacaatttgaaaacaagaacctcgcttaggcctggttccatattacgtgggtaggatcaCCCTTCGgtggtg                                                                                                                                                                                                                                           >  1:256332‑M2/239‑251 (MQ=255)
          aaggttgctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGcc                                                                                                                                                                                                                                         <  2:106937‑M2/15‑1 (MQ=255)
           tGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttaccc                                                                                                                                                                                                                                          <  1:319397‑M2/249‑12 (MQ=255)
                    ctGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagt                                                                                                                                                                                                                                 >  1:271542‑M2/1‑229 (MQ=255)
                     tacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcatgccggaaaaatttgaaaacaagaaacccgcataggcctgtgtccaaattacgggggtaggtgcacacttcggtggcgacggatttaaatt                                                                                                                                                                                                                              >  2:277854‑M2/226‑236 (MQ=255)
                      ggCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggac                                                                                                                                                                                                                             <  2:148748‑M2/251‑25 (MQ=255)
                      ggCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtgg                                                                                                                                                                                                                               >  2:112153‑M2/1‑227 (MQ=255)
                       gCAGGCCCATGGCTTCTAAGGATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCCGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggaca                                                                                                                                                                                                                            >  2:233183‑M2/1‑226 (MQ=255)
                              gcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactgtatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttatgcctgtgtccatattacatgggtatgatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGAc                                                                                                                                                                                                                     <  1:34896‑M2/35‑1 (MQ=255)
                              cATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTCTGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGCACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTAGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcattagtggacacgcggct                                                                                                                                                                                                                     <  1:49950‑M2/251‑33 (MQ=255)
                                     tCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtga                                                                                                                                                                                                               >  1:238568‑M2/1‑212 (MQ=255)
                                           gcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCgg                                                                                                                                                                                                        <  1:320634‑M2/48‑1 (MQ=255)
                                                 ttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgcttacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCCCTTCGGTGGTGCCGCTTTTAAATTCAACCAGACGGTTATAAAGCGGGACgg                                                                                                                                                                                                   >  1:446533‑M2/198‑250 (MQ=255)
                                                   cattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGa                                                                                                                                                                                                  >  2:96448‑M2/196‑249 (MQ=255)
                                                       cgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgctgaggccggtgtccatattacgtgggtagtatcaCACTTCGGTGTTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGc                                                                                                                                                                                            <  1:455613‑M2/60‑1 (MQ=255)
                                                         gccAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtg                                                                                                                                                                                          >  1:483533‑M2/1‑192 (MQ=255)
                                                          tgaaagtggaatgtatccatggcgaacaatttatcagccgggaaatcatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgcggcggactcagtccggaacaatttgaaaacaagaacctcgcttcggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCCACCAGAAGGTTATAAAGCGGGACGGAAGAGGCGTc                                                                                                                                                                                         >  1:179720‑M2/189‑251 (MQ=255)
                                                           gaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTc                                                                                                                                                                                         <  2:141301‑M2/63‑1 (MQ=255)
                                                             gAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcgatagtggacacgcggctaagttagtaaactctcagtcagaggtgactc                                                                                                                                                                                      >  2:396161‑M2/1‑188 (MQ=255)
                                                               aaCTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagggagtaaactctcagtcagaggtgactcac                                                                                                                                                                                    >  1:148748‑M2/1‑186 (MQ=255)
                                                                aCTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcac                                                                                                                                                                                    <  1:292624‑M2/250‑66 (MQ=255)
                                                                   ttATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatg                                                                                                                                                                                 >  1:101423‑M2/1‑182 (MQ=255)
                                                                         tACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaa                                                                                                                                                                           <  1:171830‑M2/250‑75 (MQ=255)
                                                                              ggagaacactttatcagccgggaaataatgcgggcaacggtgtttcattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgggggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGgaggca                                                                                                                                                                      >  1:479950‑M2/169‑248 (MQ=255)
                                                                                 gaacactttatcagacgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcaccgttggtgtggcggcctcagtccggcacaaattgaaaaaaagaacctcgcttaggcctgtgtcaatattacgtgggtaggatcaCACTTCGGTGGTGCCGGTTTTAAATTCAAACAGACGGGTATAAAGCTGGTCGGAAGTGGCGTCACAGGTGGTGCCGGAGgtaaca                                                                                                                                                                   >  2:86247‑M2/166‑248 (MQ=255)
                                                                                   gcgcGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCGTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaa                                                                                                                                                                 >  2:445289‑M2/1‑166 (MQ=255)
                                                                                      cgTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTGTAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccag                                                                                                                                                             >  2:288953‑M2/1‑163 (MQ=255)
                                                                                           ttCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaa                                                                                                                                                         <  2:389550‑M2/250‑93 (MQ=255)
                                                                                                     aataatgcgggcaacggtgtttaactatatcgaatgggattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTAAAACCCTTcc                                                                                                                                              <  2:335677‑M2/106‑1 (MQ=255)
                                                                                                      ataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGGCATATGTTGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCg                                                                                                                                             <  1:288315‑M2/107‑1 (MQ=255)
                                                                                                            gaACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcat                                                                                                                                       <  2:81762‑M2/251‑111 (MQ=255)
                                                                                                            cgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATATGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATc                                                                                                                                       <  1:78415‑M2/113‑1 (MQ=255)
                                                                                                                           ggCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcccatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgc                                                                                                                        <  1:252919‑M2/251‑126 (MQ=255)
                                                                                                                           aatgagatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATaa                                                                                                                         <  2:388302‑M2/127‑1 (MQ=255)
                                                                                                                             cGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgc                                                                                                                        <  1:245680‑M2/249‑126 (MQ=255)
                                                                                                                               agatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCa                                                                                                                     <  2:273101‑M2/131‑1 (MQ=255)
                                                                                                                                       aCGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttctcagtgaagccctg                                                                                                            >  2:237113‑M2/1‑114 (MQ=255)
                                                                                                                                        gtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGc                                                                                                           <  1:484479‑M2/141‑1 (MQ=255)
                                                                                                                                          cgTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaag                                                                                                         >  1:166032‑M2/1‑111 (MQ=255)
                                                                                                                                             tacaatcggtggcggcggcacagttggtgtggcggcctcaggccggaacaattttaaaacaacaacctccattaggcctgtgtccatattaagtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCCGACGGGTATAAAGAGGGACGGAAGAGGGGTCATAGGTGGTGCCGGCGGTAAACAGCCGCGGGGTTAACCCTTCCGGGGATCCTTCTGATCAATAAaccagagtttttacctga                                                                                                       >  2:396314‑M2/106‑243 (MQ=255)
                                                                                                                                             cGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTGCAGCGAGGCCCGGGATCACttatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagct                                                                                                       >  1:215714‑M2/1‑108 (MQ=255)
                                                                                                                                                         cggcggcgcagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCTGCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGGTCCGTCTGAGTAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGa                                                                                          <  1:43493‑M2/158‑1 (MQ=255)
                                                                                                                                                            aTTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggt                                                                                       <  1:293922‑M2/251‑159 (MQ=255)
                                                                                                                                                                  gTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgaca                                                                                                                                                                              >  2:403378‑M2/1‑87 (MQ=255)
                                                                                                                                                                  gTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgaca                                                                                                                                                                              <  1:403378‑M2/158‑72 (MQ=255)
                                                                                                                                                                   gttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCTGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCTGGTTAAACCCTTCCGGAGATCCTTCTGAGCAGTAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGc                                                                                <  1:218780‑M2/168‑1 (MQ=255)
                                                                                                                                                                      ggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTGTTAGCCTGAACACTTGCTGCGACGGTCATAGccac                                                                             <  2:293854‑M2/171‑1 (MQ=255)
                                                                                                                                                                       aCTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaaca                                                                                                                                                                        >  1:171135‑M2/1‑82 (MQ=255)
                                                                                                                                                                       aCTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaaca                                                                                                                                                                        <  2:171135‑M2/159‑78 (MQ=255)
                                                                                                                                                                          tCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcagtcgcctgaattgcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgca                                                                           >  1:56576‑M2/1‑79 (MQ=255)
                                                                                                                                                                           cacaCCCTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcataggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatctgtgttactgccgcagcc                                                                        >  2:319397‑M2/1‑78 (MQ=255)
                                                                                                                                                                             cacCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTGTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtga                                                                                                                                                                                         >  1:242445‑M2/1‑76 (MQ=255)
                                                                                                                                                                                     gtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCa                                                                >  2:14764‑M2/66‑249 (MQ=255)
                                                                                                                                                                                          aTGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctg                                                         <  1:209730‑M2/251‑189 (MQ=255)
                                                                                                                                                                                          aTGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctg                                                         >  1:141081‑M2/1‑63 (MQ=255)
                                                                                                                                                                                              aatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCAt                                                     >  1:124749‑M2/57‑251 (MQ=255)
                                                                                                                                                                                                ggTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacaggacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaagttcgcagtgaagccctgaagcttgcttaacgcatcggtgttactgcc                                                                              >  2:416894‑M2/1‑57 (MQ=255)
                                                                                                                                                                                                ggTATAGGTTTTACCGTCCTCGCTGACTTCCCACTTTTCAGCGCGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagagagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaacccagtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgcc                                                                              <  1:416894‑M2/224‑168 (MQ=255)
                                                                                                                                                                                                     aaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGAc                                              <  1:221953‑M2/202‑1 (MQ=255)
                                                                                                                                                                                                     aaacaagaacctcgcataggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAATCCAGAGTTTTAGCCTGAACACGTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGAc                                              <  1:175456‑M2/202‑1 (MQ=255)
                                                                                                                                                                                                          ttACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactc                                          >  2:393074‑M2/1‑47 (MQ=255)
                                                                                                                                                                                                           tACCGTCTTCGCTGACTTCCCACTTGTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactct                                         >  2:49950‑M2/1‑46 (MQ=255)
                                                                                                                                                                                                              cGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctaca                                      <  1:170943‑M2/250‑208 (MQ=255)
                                                                                                                                                                                                                ccgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTTATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGa                                   <  1:396314‑M2/213‑1 (MQ=255)
                                                                                                                                                                                                                   tCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctacaact                                   >  2:171830‑M2/1‑38 (MQ=255)
                                                                                                                                                                                                                     taggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGAGGGACGGAAGAGGCGTCATAGGGGGTGCCGGAGGTAAACAGATGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGCCGGTCCTAGCAACCAGGCTGAGACCCAGCTTCAGCATCCCTGTCTTTTTCAAGGAAATAc                              >  1:182524‑M2/34‑251 (MQ=255)
                                                                                                                                                                                                                       tGACTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctacaactggcgc                              <  2:108374‑M2/249‑216 (MQ=255)
                                                                                                                                                                                                                       ggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGAGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGc                            >  1:57059‑M2/32‑251 (MQ=255)
                                                                                                                                                                                                                          cTTCCCACTTTTCAGCGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctacaactggcgcagta                          <  2:138386‑M2/250‑220 (MQ=255)
                                                                                                                                                                                                                            gtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCGGACTTTTTCAAGGAAATACGCattat                       <  1:277854‑M2/225‑1 (MQ=255)
                                                                                                                                                                                                                            gtgtccatattacgtgggtaggataaCCCTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGAAGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCACTGACTTTTTCAAGGAAATACGCattat                       >  1:171371‑M2/27‑251 (MQ=255)
                                                                                                                                                                                                                              gtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCTTTATTc                     <  1:377504‑M2/227‑1 (MQ=255)
                                                                                                                                                                                                                                ccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTg                   <  2:124749‑M2/229‑1 (MQ=255)
                                                                                                                                                                                                                                         cGAGGCCCGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctacaactggcgcagtaaacagcaaaatcagc           <  1:397705‑M2/250‑235 (MQ=255)
                                                                                                                                                                                                                                           gggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTGCTCCAATtgtg        <  1:14764‑M2/240‑1 (MQ=255)
                                                                                                                                                                                                                                                cGGGATCACtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcgcaactctacaactggcgcagtaaacagcaaaatcagcagacgtct   >  2:28527‑M2/1‑9 (MQ=255)
                                                                                                                                                                                                                                                 gggATCGCtgatcttacccagcaatagtggacacgcggctaagtgagtaatctctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgcggaacgcagcggtgttactgccgcagcccgtgaactcagcctgtatgagtcacaactctacaactggcgcagtaaacagcaaaatcagcagacgtctt  >  1:35371‑M2/1‑8 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     
TTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTGCTCCAATTGTGATGTTT  >  NC_000913/3707238‑3707729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.