| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,060,444 | Δ19,761 bp | yihL–yiiF | 19 genes yihL, yihM, yihN, ompL, yihO, yihP, yihQ, yihR, yihS, yihT, yihU, yihV, csqR, yihX, yihY, dtd, fabY, yiiE, yiiF |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4060444 | 4080204 | 19761 | 25 [0] | [1] 26 | yihL–yiiF | yihL,yihM,yihN,ompL,yihO,yihP,yihQ,yihR,yihS,yihT,yihU,yihV,csqR,yihX,yihY,dtd,fabY,yiiE,yiiF |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4060443 | 0 (0.000) | 25 (0.810) | 24/488 | 0.3 | 100% | intergenic (+213/‑4) | bipA/yihL | 50S ribosomal subunit assembly factor BipA/putative DNA‑binding transcriptional regulator YihL |
| ? | NC_000913 | 4080205 = | 0 (0.000) | intergenic (+236/+94) | yiiF/fdhE | protein YiiF/formate dehydrogenase formation protein | |||||
GGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATGTGGTGGTGGGTAAATTGAGGCCAAACCGGCACTGGCGGCATAGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTTCACCCGGAAACAGGAACGGGTTGATGGAACTGCGGGCATAGCCTTCTTGCTCCATTCG‑TGCGTCCAGTACCAGAGAGGCGAGGTCATCTGCTACGGCTTCGATTTTTGGATCTTTTTCCTGATAGAGAATTTTCAGGT > NC_000913/4079960‑4080447 | gccgcgccaaccgcgcaccgaaagacgattaatttcgctttttagtcataaacaacctgccagcgatggaaggtttttttttgcctgtcgtgagcgcacaacaatgcgagtatctcccttataagtctgcggttacgtcaatagagagctttgtcacaattatctgcaaagtcatacgccgttaattgctttcttttttggcgtaagcgtaagatgcttcatctggtttaaaccaaaaggattaaGCTtgg > 1:156307‑M2/246‑250 (MQ=255) ccaaccgcgcaccgaaagacgattaatttcgttttttcgtcataacaaacctgacagcgatggcagggttttttttgaatgtggtaagagcacacccatgcgagtatctcccttataagtctgtggttacgtcaatagagagctttgtcacaattatctgcaaagtcatacgccgttaattgctttcttttttggcgtaagcgtaagatgattcatctggtttaaaccaaaaggattaaGCTTGAggtggt > 1:278977‑M2/240‑251 (MQ=255) tagtcataagaaacctgccagcgatagcaggtttttttttgactgtcgtaagcgcaccccaatgcgcgtatctcccttataagtctgtggttacgtccatagagagctttgtcacaattatctgcaaagtcatacgccgttaattgctttcttttttggcgtaagcgtaagatgcttcatctggtttaaaccaaaaggcttaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTAAAACCCt > 2:211813‑M2/204‑250 (MQ=255) gtcatcaaaaccctgccagcgatggcaggtttttttttgcctggcgtgagcaaacaacaatgcgaggatctcccttataagtctgtggttacgtcaatagagagctctgtcacaattacctgcaaactcatacgccgttaattgctttcttttttggcgtaagcgtaagatgcttcatctggtttaaaccaaaagcattaaGCTTGAGGAGGTAAGGCGGAATCCGAGAGATGGTGGCGTCACCCCCCATg > 2:90906‑M2/202‑251 (MQ=255) aaaacctgccagcgatggcaggtttttttttgcctgtcgtgagcgcacaccaatgcgagtatctcccttataagtctgtggttacgtcaatagagagctttgtcacaattatctgcaaagtcatacgccgttaattgctttcttttttggcgtaagcgtaagatgcttcatctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTa < 2:250889‑M2/57‑1 (MQ=255) ggtttttttttgcctgtcgtgagcgcacaccaatgcgagtatctcccttataagtctgtggttacgtcaatagagagctttgtcacaattatctgcaaagtcatacgccgttaattgctttctttgttggcgtaagcgtaagatgcttcatctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGGGGCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCAc < 1:297330‑M2/77‑1 (MQ=255) ggtttttttttgcctggcgtgagcgcacaccaatgcgagtatctcccttataagtctgtggttacgtcaatagagagctttgtcacaattatctgcaaagtcatacgccgttaattgctttcttttgtgtcgtaagcggaagatgcgtcatctggtttaaaccaaaagtattaaGCTTGAGGTGGTAACTCGGAATACGAGAGATGGTGTCGTCTCACCCTATGAGCTGTAATCCGGGCGACCTGCGCCAc < 1:286930‑M2/77‑1 (MQ=255) ttttttttgcctgtcgtgagcgcacaccaatgcgagtatctcccttataagtctgtggttacgtcaatagagagctttgtcacaattatctgcaaagtcatacgccgttaattgctttcttttttggcgtaagcggaagatgcttcagctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTTTCGGCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCAccc < 1:133058‑M2/79‑1 (MQ=255) tttttgcctgtcgtgagcgcacaccaatgcgagtatctcccttataagtctgtggttacgtcaatagagagctttgtcacaattatctgcaaagtcatacgccgttaattgctttcttttttggcgtaagcgtaagatgcttcatctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGa < 1:168977‑M2/82‑1 (MQ=255) cgtgagcgcacaccaatgcgagtagctcccttagaagtctgtggttacgtcaatagagagctttgtcacaattatctgcaaagtcatacgccgttaattgctttcttttttggcgtaagcgtaagatgcttcatctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAgaga < 2:88446‑M2/94‑1 (MQ=255) cgagtatctcccttataagtctgtggttacgtcaatagagagctttgtcacaattatctgcaaagtcatacgccgttaattgctttcttttttggcgtaagcgtaagatgcttcatctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTTCACCCgg > 1:170434‑M2/140‑251 (MQ=255) gtatctcccttataagtctgtggttacgtcaatagagagctttgtcacaattatctgcaaagtcatacgccgttaattgctttcttttttggcgtaagcgtaagatgcttcatctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTTCTCTCCTGCACCCGGaaa < 2:204630‑M2/115‑1 (MQ=255) acgtcaatagagagctttgtcacaattatctgcaaagtcatacgccgttaattgctttcttttttggcgtaagcgtaagatgcttcatctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTTCACCCGGCAACAGGAACGGGTTGATGGAACTGCgg > 2:296914‑M2/112‑251 (MQ=255) agagctttgtcacaattatctgcaccgtcatacgccgttaattgctttcttttttggcgtaagcgaaagctgcttcatctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTTCACCCGGAAACAGGAACGGGTTGATGGAACTGCGGGCATAGCctt > 2:156214‑M2/102‑251 (MQ=255) acgccgttaattgctttcttttttggcgtaagcgtaagatgcttcatctggtttaaacccaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTTCACCCGGAAACAGGAACGGGTTGATGGAACTGCGGGCATAGCCTTCTTGCTCCATTCG‑TGCGTCCAGTACCag > 1:218196‑M2/71‑248 (MQ=255) attgctttcttttttggcgtaagcgtaagatgcttcatctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGTTGTCGTCACGTCCTATGAGCTGTAAGCCGGGCGACCTTCTCCTCCCGGAAAACGTCATATATTACTCTCCTTCACCCGGAAACAGGTTCGGGTGGATGGAACTGCGGGCATAGCGGTCTTGCTCCATTCG‑TGCGTCCAGTACCAGAGAGGCGAGGTc < 1:49342‑M2/190‑1 (MQ=255) ctttcttttttggcgtaagcgtaagatgcttcatctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTTCACCCGGAAACAGGAACGGGTTGATGGAACTGCGGGCATAGCCTTCTTGCTCCATTCG‑TGCGTCCAGTACCAGAGAGGCGAGGTCATCt > 2:60744‑M2/58‑251 (MQ=255) tttcttttttggcgtaagcgtaagatgcttcatctggtttaaacaacaaggattaaGCTTGAGGAGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTTCACCCGGAAACAGGAACGGGTTGATGGAACTGCGGGCATAGCCTTCTTGCTCCATTCG‑TGCGTCCAGTACCAGAGAGGCGAGGTCATCTg > 1:143542‑M2/57‑251 (MQ=255) ttcttttttggcgtaagcgtaagatgcttcatctggtttaaaccaaaatgattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGGGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTGCGCCCGGAAACAGGAACGGGTTGATGGAACTGCGGGCATAGCCTTCTTGCTCCATTCG‑TGCGTCCAGTACCAGAGAGGCGATGTCATCt < 2:156307‑M2/194‑1 (MQ=255) tcttttttggcgtaagcgtaagatgcttcatctgggttaaaccaaaaggattaaGCTAGAGGAGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCAGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTTCACCCGGAAACAGGAACGGGTTGATGGAACTGCGGGCATAGCCTTCGTGCTCCATTCG‑TGCGTCCATTCCCAGATAGGCGAGGTCATCTGc < 2:36424‑M2/196‑1 (MQ=255) cgtaagcgtaagatgcttgctctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTTCACCCGGAAACAGGAACGGGTTGATGGAACTGCGGGCATAGCCTTCTTGCTCCATTCG‑TGCGTCCAGTACCAGAGAGGCGAGGTCATCTGCTACGGCTTcgt > 2:55057‑M2/45‑250 (MQ=255) aagatgcttcatctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTTCACCCGGAAACAGGAACGGGTTGATGGAACTGCGGGCATAGCCTTCTTGCTCCATTCG‑TGCGTCCAGTACCAGAGAGGCGAGGTCATCTGCTACGGCTTCGATTTTTGGAt < 1:296914‑M2/216‑1 (MQ=255) gcttcatctggtttaaaccaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTTCACCCGGAAACAGGAACGGGTTGATGGAACTGCGGGCATAGCCTTCTTGCTCCATTCG‑TGCGTCCAGTACCAGAGAGGCGAGGTCATCTGCTACGGCTTCGATTTTTGGATCtttt > 1:124442‑M2/31‑251 (MQ=255) ttaaaccaaaaggattatGCTTGAGGTGGTAACGCGGAATACGAGCGATGCTGCCGTCACACCCTATGCGCTGTAATCCGGGAGCACTGCGCCACCCGGAAAACGTCAGCGATTACTATCCTTCACCCGGAAACAGGAACGGGTTGATGGAACTGCGCGCATAGACTTCTTGCTCCATTCG‑AGCGTCCAGTACCAGAGAGGCGAGGTCATCTGCTACGGCTTCGATTTTTGGATCTTTTTCCTGATag > 1:134621‑M2/19‑248 (MQ=255) accaaaaggattaaGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTTCACCCGGAAACAGGAACGGGTTGATGGAACTGCGGGCATAGCCTTCTTGCTCCATTCG‑TGCGTCCAGTACCAGAGAGGCGAGGTCATCTGCTACGGCTTCGATTTTTGGATCTTTTTCCTGATAGAGAAttt < 2:170434‑M2/237‑1 (MQ=255) aggattaaGCTTTAGGTGGTAACGCGGAATACGAGAGTTGGGGGCGTCACAGCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTGCTCGCCTGCACCCGGAAACAGGAACGGGTTGAGGTAACTGCGGGCAGAGCCGTCTTTCTCCATGCGGTG‑GTCGATGACCTGAGAGGGGAGGGTATCTGCTTCGCCTTGGAGGTTTGTAGCTTTTTCGTGATAGATAATTTGCAGGt < 2:125721/244‑1 (MQ=255) | GGAATGGTAATGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCAGTTTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCAATCTTACGCTTGTCATCAGTCTCATGCCCATAACCTTATTGATGTGGTGGTGGGTAAATTGAGGCCAAACCGGCACTGGCGGCATAGCTTGAGGTGGTAACGCGGAATACGAGAGATGGTGTCGTCACACCCTATGAGCTGTAATCCGGGCGACCTGCGCCACCCGGAAAACGTCAGAGATTACTCTCCTTCACCCGGAAACAGGAACGGGTTGATGGAACTGCGGGCATAGCCTTCTTGCTCCATTCG‑TGCGTCCAGTACCAGAGAGGCGAGGTCATCTGCTACGGCTTCGATTTTTGGATCTTTTTCCTGATAGAGAATTTTCAGGT > NC_000913/4079960‑4080447 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |