| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 519,143 | Δ14,682 bp | [ybbO]–[allZ] | [ybbO], [tesA], ybbA, ybbP, rhsD, ybbC, ylbG, selU, allS, allA, [allR], [allZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 519143 | 533824 | 14682 | 30 [0] | [0] 29 | [ybbO]–[allZ] | [ybbO],[tesA],ybbA,ybbP,rhsD,ybbC,ylbG,selU,allS,allA,[allR],[allZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 519142 | 0 (0.000) | 29 (0.640) | 25/480 | 0.7 | 100% | coding (8/810 nt) coding (624/627 nt) |
ybbO tesA |
NADP(+)‑dependent aldehyde reductase YbbO multifunctional acyl‑CoA thioesterase I and protease I and lysophospholipase L1 |
| ? | NC_000913 | 533825 = | 0 (0.000) | coding (815/816 nt) noncoding (197/235 nt) |
allR allZ |
DNA‑binding transcriptional repressor AllR small RNA AllZ |
|||||
CACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCGT > NC_000913/533580‑534062 | ggtcagggcgatcacctcgtcggctgcgcgatcaacactttctggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAAtgtc > 1:368042‑M2/246‑251 (MQ=255) gatcacctcgtgggctgcgcgatcaacactttctggagcctccagatcgatcaacacgccggccaatcccatgctgttcgtgcgctcaacatcatccgggttccggcaccctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactcgaacatccggtcattaagaccgatttttgcctaactttacctgacagcatctccgttgctttatAATGTCTGCCGCATc > 2:63556‑M2/237‑251 (MQ=255) ggtgaatccagatcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccacgggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAAttt < 1:427092‑M2/49‑1 (MQ=255) ggtgaatccagagcgttcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGGCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAAttt < 2:381099‑M2/49‑1 (MQ=255) gaatccagagcgatcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATTTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGaa < 1:26183‑M2/52‑1 (MQ=255) atcaacacgccggtaaatcccatgctgttcatgcgctcaacatcatccggtttccggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAAt > 2:441773‑M2/188‑251 (MQ=255) ccggcaacctaccagcacatgaaaaccctggcttgttaattcgagcgcgctgtccaggccatttccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCCGTCGCATCCCGATCTGCGGAGCGGGTTTTTGTGACAAAATTTGAAAGTTTGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGATCCGTTGAcg < 2:21059‑M2/116‑1 (MQ=255) cggcaacctgccagcacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATcc > 2:110833‑M2/134‑149 (MQ=255) cacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGaaa > 2:115179‑M2/120‑172 (MQ=255) cacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGaaa < 1:115179‑M2/53‑1 (MQ=255) cacatgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAACCGTTGACGCGGCCATGTATGTGCt > 2:411601‑M2/120‑251 (MQ=255) atgaaaaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTgg > 2:160155‑M2/117‑250 (MQ=255) aaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGttttt > 1:419214‑M2/112‑148 (MQ=255) aaccctggcgttttaattcgagcgcgctttccaggccaattccactggaacatccggtaattaagaccgatttgtgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGttttt < 2:419214‑M2/37‑1 (MQ=255) ccctggcgttttaattcgatcgcgcgttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATACAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGagaaagaa < 1:269485‑M2/142‑1 (MQ=255) gcgctttccaggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACAGCCTTCGgt > 2:162487‑M2/89‑251 (MQ=255) cgttccaggccaagtccactggaacatccggtaattaagaccgatttttgcataactttaccggtcaggatctccgttgcttgatAATGGCTGTCGCATCCCGCTCTGCGGAGCGGTTTTTTTTGACAAAATTTGAAAGTTGGAAAAAGTTTCCAATAAATAGAGGTAGTAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTCGAGAAAGAAGCTATCACTACCGCCTTCGGTGtt < 2:203980‑M2/166‑1 (MQ=255) caggccaattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCggg > 2:149628‑M2/81‑251 (MQ=255) aattccactggaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGc < 2:316169‑M2/177‑1 (MQ=255) aattccactggaacatccggtaattaagaccgatttgtgcataacttgacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGc < 1:63556‑M2/177‑1 (MQ=255) gaacatccggtaattaagaccgatttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCg > 1:313082‑M2/65‑251 (MQ=255) acatccggtaattaagcccgatttttgcctaactttccctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGGAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGACGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCCATCCGtt > 2:465965‑M2/63‑251 (MQ=255) atttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGc < 1:441773‑M2/209‑1 (MQ=255) atttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGc > 1:172177‑M2/43‑251 (MQ=255) atttttgcataactttacctgtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGc < 1:362026‑M2/209‑1 (MQ=255) tttacctgtcaggatctccgttgctttatAATGTCTGACGCATCCCGCTATGAGGAGCGGGTTTTTTTGACAACATTTGAAAGTTGGCAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGACAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGAATCACTACCGCCTTCGGCGTTCCGGGAGCTGCAATCAATCCGTTCTACTAAGCGATGCGTAAGCACGGCGGGATTCg > 2:409726‑M2/30‑251 (MQ=255) gtcaggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTATGCACGTCGTTATTCGTCACAtt < 1:376547‑M2/229‑1 (MQ=255) aggatctccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGAATTCGTCACATTCTg > 2:149462‑M2/20‑251 (MQ=255) tccgttgctttatAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCGt > 1:135977‑M2/14‑251 (MQ=255) | CACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGGAATAAAATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCGT > NC_000913/533580‑534062 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |