| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 519,143 | Δ14,682 bp | [ybbO]–[allZ] | [ybbO], [tesA], ybbA, ybbP, rhsD, ybbC, ylbG, selU, allS, allA, [allR], [allZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 519143 | 533824 | 14682 | 30 [0] | [0] 29 | [ybbO]–[allZ] | [ybbO],[tesA],ybbA,ybbP,rhsD,ybbC,ylbG,selU,allS,allA,[allR],[allZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 519142 | 0 (0.000) | 29 (0.640) | 25/480 | 0.7 | 100% | coding (8/810 nt) coding (624/627 nt) |
ybbO tesA |
NADP(+)‑dependent aldehyde reductase YbbO multifunctional acyl‑CoA thioesterase I and protease I and lysophospholipase L1 |
| ? | NC_000913 | 533825 = | 0 (0.000) | coding (815/816 nt) noncoding (197/235 nt) |
allR allZ |
DNA‑binding transcriptional repressor AllR small RNA AllZ |
|||||
ATTATCGGTCAGGGCGATCACCTCGTCGGCTGCGCGATCAACACTTTCTGGTGAATCCAGATCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATGAGTCATGATTTACTAAAGGCTGCAACTGCTTCGCCATCCAGTCGGCAATAAACGGCTGGGCGTCGCGGTTGGGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGCAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACA > NC_000913/518892‑519380 | aTTATCGGTCAGGGCGATCACCTCGTCGGCTGCGCGATCAACACTTTCTGGTGAATCCAGATCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTAt < 1:442238/251‑1 (MQ=255) ggTCAGGGCGATCACCTCGTCGGCTGCGCGATCAACACTTTCTGGTGAATCCAGATCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtc > 1:368042‑M1/1‑245 (MQ=255) gATCACCTCGTGGGCTGCGCGATCAACACTTTCTGGAGCCTCCAGATCGATCAACACGCCGGCCAATCCCATGCTGTTCGTGCGCTCAACATCATCCGGGTTCCGGCACCCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTCGAACATCCGGTCATTAAGACCGATTTTTGCCTAACTTTACCTGACAGCATCTCCGTTGCTTTATaatgtctgccgcatc > 2:63556‑M1/1‑236 (MQ=255) ggTGAATCCAGATCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACGGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaattt < 1:427092‑M1/251‑50 (MQ=255) ggTGAATCCAGAGCGTTCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctggcgcatcccgctctgcggagcgggtttttttgacaaaattt < 2:381099‑M1/251‑50 (MQ=255) gAATCCAGAGCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatttctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaa < 1:26183‑M1/251‑53 (MQ=255) atcAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaat > 2:441773‑M1/1‑187 (MQ=255) ccGGCAACCTACCAGCACATGAAAACCCTGGCTTGTTAATTCGAGCGCGCTGTCCAGGCCATTTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtccgtcgcatcccgatctgcggagcgggtttttgtgacaaaatttgaaagtttgaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagatccgttgacg < 2:21059‑M1/250‑117 (MQ=255) cGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcc > 2:110833‑M1/1‑133 (MQ=255) cacaTGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagaaccgttgacgcggccatgtatgtgct > 2:411601‑M1/1‑119 (MQ=255) cacaTGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaa > 2:115179‑M1/1‑119 (MQ=255) cacaTGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaa < 1:115179‑M1/172‑54 (MQ=255) aTGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctgg > 2:160155‑M1/1‑116 (MQ=255) aaCCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggttttt > 1:419214‑M1/1‑111 (MQ=255) aaCCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTGTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggttttt < 2:419214‑M1/148‑38 (MQ=255) cccTGGCGTTTTAATTCGATCGCGCGTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatacaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaa < 1:269485‑M1/251‑143 (MQ=255) gcgcTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactacagccttcggt > 2:162487‑M1/1‑88 (MQ=255) cgttccAGGCCAAGTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCGGTCAGGATCTCCGTTGCTTGATaatggctgtcgcatcccgctctgcggagcggttttttttgacaaaatttgaaagttggaaaaagtttccaataaatagaggtagtaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctcgagaaagaagctatcactaccgccttcggtgtt < 2:203980‑M1/249‑167 (MQ=255) cAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactaccgccttcggtgttccggg > 2:149628‑M1/1‑80 (MQ=255) aaTTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactaccgccttcggtgttccgggagctgc < 2:316169‑M1/251‑178 (MQ=255) aaTTCCACTGGAACATCCGGTAATTAAGACCGATTTGTGCATAACTTGACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactaccgccttcggtgttccgggagctgc < 1:63556‑M1/251‑178 (MQ=255) gAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactaccgccttcggtgttccgggagctgcaatcaatccg > 1:313082‑M1/1‑64 (MQ=255) aCATCCGGTAATTAAGCCCGATTTTTGCCTAACTTTCCCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagagggaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagacggtatcactaccgccttcggtgttccgggagctgcaatccatccgtt > 2:465965‑M1/1‑62 (MQ=255) aTTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactaccgccttcggtgttccgggagctgcaatcaatccgttctactcagcgatgcgtaagc < 1:362026‑M1/251‑210 (MQ=255) aTTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactaccgccttcggtgttccgggagctgcaatcaatccgttctactcagcgatgcgtaagc > 1:172177‑M1/1‑42 (MQ=255) aTTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactaccgccttcggtgttccgggagctgcaatcaatccgttctactcagcgatgcgtaagc < 1:441773‑M1/251‑210 (MQ=255) tttACCTGTCAGGATCTCCGTTGCTTTATaatgtctgacgcatcccgctatgaggagcgggtttttttgacaacatttgaaagttggcaaaattttccaataaatagaggtaggaataaaatggcaaaaatgacagccgttgacgcggcaatgtatgtgctggagaaagaaggaatcactaccgccttcggcgttccgggagctgcaatcaatccgttctactaagcgatgcgtaagcacggcgggattcg > 2:409726‑M1/1‑29 (MQ=255) gTCAGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactaccgccttcggtgttccgggagctgcaatcaatccgttctactcagcgatgcgtatgcacgtcgttattcgtcacatt < 1:376547‑M1/251‑230 (MQ=255) aGGATCTCCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactaccgccttcggtgttccgggagctgcaatcaatccgttctactcagcgatgcgtaagcacggcggaattcgtcacattctg > 2:149462‑M1/1‑19 (MQ=255) tcCGTTGCTTTATaatgtctgtcgcatcccgctctgcggagcgggtttttttgacaaaatttgaaagttggaaaaattttccaataaatagaggtaggaataaaatggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcactaccgccttcggtgttccgggagctgcaatcaatccgttctactcagcgatgcgtaagcacggcggtattcgtcacattctggcgcgt > 1:135977‑M1/1‑13 (MQ=255) | ATTATCGGTCAGGGCGATCACCTCGTCGGCTGCGCGATCAACACTTTCTGGTGAATCCAGATCGATCAACACGCCGGTAAATCCCATGCTGTTCATGCGCTCAACATCATCCGGTTTCCGGCAACCTGCCAGCACATGAAAACCCTGGCGTTTTAATTCGAGCGCGCTTTCCAGGCCAATTCCACTGGAACATCCGGTAATTAAGACCGATTTTTGCATAACTTTACCTGTCAGGATCTCCGTTGCTTTATGAGTCATGATTTACTAAAGGCTGCAACTGCTTCGCCATCCAGTCGGCAATAAACGGCTGGGCGTCGCGGTTGGGATGAATACCGTCATCCTGCATCCATTGTGGCTTGAGGTAGACCTCTTCCATAAAAAAGGGCAGCAGCGGAACATCAAACTCTTTGGCGAGTTTGGGGTAAATGGCGCTAAAGGCTTCATTATAACGGCGACCATAGTTTGCAGGCAGACGTATTTGCATTAACA > NC_000913/518892‑519380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |