| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,139,771 | 10483 bp→TG | [ptsA]–[eptC] | [ptsA], frwC, frwB, pflD, pflC, frwD, yijO, [eptC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4139771 | 4150253 | 10483 | 31 [1] | [0] 29 | [ptsA]–[eptC] | [ptsA],frwC,frwB,pflD,pflC,frwD,yijO,[eptC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4139770 | 1 (0.020) | 29 (0.640) +TG |
26/480 | 0.6 | 98.3% | coding (2452/2502 nt) | ptsA | putative PTS multiphosphoryl transfer protein PtsA |
| ? | NC_000913 | 4150254 = | 0 (0.000) | coding (12/1734 nt) | eptC | phosphoethanolamine transferase EptC | |||||
GCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAA > NC_000913/4150015‑4150497 | gagcaaacagaatgccctcatcaccaatcgctttttgcagacgcggcagcacttcccatatggactccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtttccagatacagttccatgatgtgtccttttacaggtccagttcatgttgcagcaggctggcgatagcggcggcagaggctgTGTGGAATGCAt < 2:443398‑M2/12‑1 (MQ=255)gagcaaacagaatgccctcatcaccaatcgctttttgcagacgcggcagcacttcccatatggactccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagatgctgTTTTGAATGCAt < 2:61488‑M2/12‑1 (MQ=255) gaatgccctcatcgccaatcgctttttgcagacgctgcagcacttcccatatggactccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagtgccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAAc < 2:256370‑M2/21‑1 (MQ=255) gaatgccctcatcaccaatcgctttttgcagacgcggcagcacttcccatatggactccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcatgctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAAc < 1:297189‑M2/21‑1 (MQ=255) catcacccatagctttttgcagacgcggcagcacttcccatatggactccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCCTAGTAAGAACCTGTCTTg > 2:298036‑M2/222‑250 (MQ=255) gcagacgcggcagcacttcccatatggactccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccgtttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATg < 1:187604‑M2/47‑1 (MQ=255) actcggcagcacttcccatatggactccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgtgcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcatcaggctggcgatagcgtcggcagaggcggTGTGGAATGCATAGTAAGAACCTTTCGTTAAAAAAGATCGCCGAATGTAACg < 2:271542‑M2/52‑1 (MQ=255) agcacttcccatatggactccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAg < 1:184518‑M2/14‑1 (MQ=255) agcacttcccatatggactccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAg > 2:184518‑M2/193‑206 (MQ=255) tcccatatggactccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTaa < 1:10211‑M2/64‑1 (MQ=255) ccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagccgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCCTAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGt > 1:469716‑M2/174‑251 (MQ=255) ggaagcgatactgctcgggttagttggcaccccgggaagggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacaggtccatgaggtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgGGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGAGATCTGAAGgtatag < 2:77701‑M2/82‑2 (MQ=255) ggaagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacggtcgacgtcgtcgacgtgagcggtgtccagatacagttccatgatgtttccttttacagtgccagttcatgttgcagcaggctgtcgatagcgtcggcagaggctgTGGGGAATGCATAGTAAGAACCGGTCATGAAAAAATATCGCCGAATGTAACGACAATTCCTGAAGGATATCTGAAGGTATATTc < 2:64630‑M2/84‑1 (MQ=255) cgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagccgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTTAGGATATCTGAAGGTACATTCAGAAtt > 1:407413‑M2/162‑251 (MQ=255) gataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAAttt < 1:442973‑M2/91‑1 (MQ=255) gggttagttgtcacctcggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATg < 1:429589‑M2/101‑1 (MQ=255) tcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACa > 1:24651‑M2/141‑195 (MQ=255) tcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcggcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACa < 2:24651‑M2/55‑1 (MQ=255) caccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGGAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGaaa < 1:298036‑M2/111‑1 (MQ=255) gaatatgcgttccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAgg < 1:214602‑M2/127‑1 (MQ=255) cttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTc > 1:49943‑M2/102‑249 (MQ=255) cgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTc < 2:468109‑M2/159‑1 (MQ=255) agcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggagatagcgtcggcagaggctgTGTGGAATGACTAGTAAGAACCTGTCTTGACAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTAgcgc > 1:311668‑M2/89‑251 (MQ=255) ccagatacaggtccatgatgttgccttttacagttccagttcatgttgcagcaagctggcgatagcgtcggcagaggctgTGTGGAATGCAGAGGAAGAACCTGTCTTGAAAAAATAGCGCCGAATGTAACGACAATTTCTGAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGGAGACAGAAAGATATTTAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCTCGCAAAAGCAc < 2:469716‑M2/171‑1 (MQ=255) ccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGa < 1:295972‑M2/193‑1 (MQ=255) aggctggcgatagcgtcggcagatgctgTGTGGGCTGCATAGTAAGAACCTGTCTTGACAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAACTATATTGAAAACGAGGGTGTGAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGTTTTGCAGAAGAGGAAGATAAGCCGGTATTACGCATACCTGCCGCAAt > 2:408846‑M2/29‑251 (MQ=255) ggcgatggcgtcggcggaggctgTGTGGAATGCATAGAAAGAACCGGTCTTGAAAAAATTTCGCCGAATGTAACGACAATTTCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCATAAAACCCTCGCGCAAAAGCACGCGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATccc < 2:452830‑M2/226‑1 (MQ=255) ggcgatcgcgtcggcagaggatgTGTGGAATGCATAGTACGAACCTGTCTTGAAACAATATCGCCGAATGTAACGACAATTCCTTAAGGATCTCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCAGCAATCCCgg > 2:301565‑M2/24‑251 (MQ=255) gaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAAGATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTTTTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTATCCGGTGTTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTaa < 1:279334‑M2/244‑1 (MQ=255) | GCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAA > NC_000913/4150015‑4150497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |