| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,139,771 | 10483 bp→TG | [ptsA]–[eptC] | [ptsA], frwC, frwB, pflD, pflC, frwD, yijO, [eptC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4139771 | 4150253 | 10483 | 31 [1] | [0] 29 | [ptsA]–[eptC] | [ptsA],frwC,frwB,pflD,pflC,frwD,yijO,[eptC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4139770 | 1 (0.020) | 29 (0.640) +TG |
26/480 | 0.6 | 98.3% | coding (2452/2502 nt) | ptsA | putative PTS multiphosphoryl transfer protein PtsA |
| ? | NC_000913 | 4150254 = | 0 (0.000) | coding (12/1734 nt) | eptC | phosphoethanolamine transferase EptC | |||||
GGCTCATGGTCTGAGCAAACAGAATGCCCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCGGCGTTAACCAGCGCGTTACGGAATTCTTCGTGCATGATGCGGCGAGCGAGGCGCGAGAAAATGCGCATATGCTGATCGCCCGCAGCGTGTTTGTTCAGGGTTAACATAATGATGAATTGCGCTTCATCATCGCCCCAGCGCACCGGCGCTTGCAGACGCGCCACGCTGATGGTGGATTGCTCAATGTGTTCTGATTTGCTGTGTGGAATGGCAAAACTAAAGCCCAGACCGGTAGAGAAAACGGC > NC_000913/4139522‑4140016 | ggCTCATGGTCTGAGCAAACAGAATGCCCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtg > 1:240843‑M1/1‑249 (MQ=255) gAGCAAACAGAATGCCCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTTTCCAGATACAGTTCCATGATGTGTCCTTTTACAGGTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGGCGGCAGAGGCtgtgtggaatgcat < 2:443398‑M1/251‑15 (MQ=255) gAGCAAACAGAATGCCCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGATGCtgttttgaatgcat < 2:61488‑M1/251‑15 (MQ=255) gAATGCCCTCATCGCCAATCGCTTTTTGCAGACGCTGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTGCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatagtaagaac < 2:256370‑M1/251‑24 (MQ=255) gAATGCCCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCATGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatagtaagaac < 1:297189‑M1/251‑24 (MQ=255) catcaCCCATAGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcctagtaagaacctgtcttg > 2:298036‑M1/1‑219 (MQ=255) gCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCGTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatagtaagaacctgtcttgaaaaaatatcgccgaatg < 1:187604‑M1/250‑50 (MQ=255) actcggcaGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTGCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCATCAGGCTGGCGATAGCGTCGGCAGAGGCggtgtggaatgcatagtaagaacctttcgttaaaaaagatcgccgaatgtaacg < 2:271542‑M1/248‑55 (MQ=255) agcaCTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatag < 1:184518‑M1/206‑17 (MQ=255) agcaCTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatag > 2:184518‑M1/1‑190 (MQ=255) tCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatagtaagaacctgtcttgaaaaaatatcgccgaatgtaacgacaattccttaa < 1:10211‑M1/250‑67 (MQ=255) ccTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGCCGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcctagtaagaacctgtcttgaaaaaatatcgccgaatgtaacgacaattccttaaggatatctgaaggt > 1:469716‑M1/1‑171 (MQ=255) ggaagcgATACTGCTCGGGTTAGTTGGCACCCCGGGAAGGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGGTCCATGAGGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgggtggaatgcatagtaagaacctgtcttgaaaaaatatcgccgaatgtaacgacaattccttaaggagatctgaaggtatag < 2:77701‑M1/245‑85 (MQ=255) ggaagcgATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGGTCGACGTCGTCGACGTGAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTGCCAGTTCATGTTGCAGCAGGCTGTCGATAGCGTCGGCAGAGGCtgtggggaatgcatagtaagaaccggtcatgaaaaaatatcgccgaatgtaacgacaattcctgaaggatatctgaaggtatattc < 2:64630‑M1/247‑87 (MQ=255) cGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGCCGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatagtaagaacctgtcttgaaaaaatatcgccgaatgtaacgacaattcctttaggatatctgaaggtacattcagaatt > 1:407413‑M1/1‑159 (MQ=255) gATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatagtaagaacctgtcttgaaaaaatatcgccgaatgtaacgacaattccttaaggatatctgaaggtatattcagaattt < 1:442973‑M1/251‑94 (MQ=255) gggTTAGTTGTCACCTCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatagtaagaacctgtcttgaaaaaatatcgccgaatgtaacgacaattccttaaggatatctgaaggtatattcagaatttgaataaaatg < 1:429589‑M1/251‑104 (MQ=255) tCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatagtaagaacctgtcttgaaaaaatatcgccgaatgtaacgaca > 1:24651‑M1/1‑138 (MQ=255) tCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGGCGGCAGAGGCtgtgtggaatgcatagtaagaacctgtcttgaaaaaatatcgccgaatgtaacgaca < 2:24651‑M1/195‑58 (MQ=255) cACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatagtaagaacctgtcttgaaaaaatatcgccgaatggaacgacaattccttaaggatatctgaaggtatattcagaatttgaataaaatgcagacagaaa < 1:298036‑M1/250‑114 (MQ=255) gAATATGCGTTCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatagtaagaacctgtcttgaaaaaatatcgccgaatgtaacgacaattccttaaggatatctgaaggtatattcagaatttgaataaaatgcagacagaaatatattgaaaacgagg < 1:214602‑M1/251‑130 (MQ=255) cTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatagtaagaacctgtcttgaaaaaatatcgccgaatgtaacgacaattccttaaggatatctgaaggtatattcagaatttgaataaaatgcagacagaaatatattgaaaacgagggtgttagaacagaagtatttc > 1:49943‑M1/1‑99 (MQ=255) cGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatagtaagaacctgtcttgaaaaaatatcgccgaatgtaacgacaattccttaaggatatctgaaggtatattcagaatttgaataaaatgcagacagaaatatattgaaaacgagggtgttagaacagaagtatttcagaaaaccctc < 2:468109‑M1/251‑162 (MQ=255) aGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGAGATAGCGTCGGCAGAGGCtgtgtggaatgactagtaagaacctgtcttgacaaaatatcgccgaatgtaacgacaattccttaaggatatctgaaggtatattcagaatttgaataaaatgcagacagaaatatattgaaaacgagggtgttagaacagaagtatttcagaaaaccctagcgc > 1:311668‑M1/1‑86 (MQ=255) ccAGATACAGGTCCATGATGTTGCCTTTTACAGTTCCAGTTCATGTTGCAGCAAGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcagaggaagaacctgtcttgaaaaaatagcgccgaatgtaacgacaatttctgaaggatatctgaaggtatattcagaatttgaataaaatggagacagaaagatatttaaaacgagggtgttagaacagaagtatttcagaaaaccctctcgcaaaagcac < 2:469716‑M1/251‑174 (MQ=255) ccTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCtgtgtggaatgcatagtaagaacctgtcttgaaaaaatatcgccgaatgtaacgacaattccttaaggatatctgaaggtatattcagaatttgaataaaatgcagacagaaatatattgaaaacgagggtgttagaacagaagtatttcagaaaaccctcgcgcaaaagcacgagggtttgcagaagaggaaga < 1:295972‑M1/250‑196 (MQ=255) agGCTGGCGATAGCGTCGGCAGATGCtgtgtgggctgcatagtaagaacctgtcttgacaaaatatcgccgaatgtaacgacaattccttaaggatatctgaaggtatattcagaatttgaataaaatgcagacagaactatattgaaaacgagggtgtgagaacagaagtatttcagaaaaccctcgcgcaaaagcacgaggttttgcagaagaggaagataagccggtattacgcatacctgccgcaat > 2:408846‑M1/1‑26 (MQ=255) gCTGGCGATAGCGTCGGCAGAGGCGGCGTTAACCAGCGCGTTACGGAATTCTTCGTGCATGATGCGGCGAGCGAGGCGCGAGAAAATGCGCATATGCTGATCGCCCGCAGCGTGTTTGTTCAGGGTTAACATAATGATGAATTGCGCTTCATCATCGCCCCAGCGCCCCGGCGCTTGCAGACGCGCCACGCTGATGGTGGATTGCTCAATGTGTTCTGATTTGCTGTGTGGAATGGCAAAACTAAAGccc > 1:395827/1‑250 (MQ=255) ggCGATGGCGTCGGCGGAGGCtgtgtggaatgcatagaaagaaccggtcttgaaaaaatttcgccgaatgtaacgacaatttcttaaggatatctgaaggtatattcagaatttgaataaaatgcagacagaaatatattgaaaacgagggtgttagaacagaagtatttcataaaaccctcgcgcaaaagcacgcgggtttgcagaagaggaagattagccggtattacgcatacctgccgcaatccc < 2:452830‑M1/249‑229 (MQ=255) ggCGATCGCGTCGGCAGAGGAtgtgtggaatgcatagtacgaacctgtcttgaaacaatatcgccgaatgtaacgacaattccttaaggatctctgaaggtatattcagaatttgaataaaatgcagacagaaatatattgaaaacgagggtgttagaacagaagtatttcagaaaaccctcgcgcaaaagcacgagggtttgcagaagaggaagattagccggtattacgcatacctgcagcaatcccgg > 2:301565‑M1/1‑21 (MQ=255) gagGCtgtgtggaatgcatagtaagaacctgtcttgaaaaaagatcgccgaatgtaacgacaattccttaaggatatctgaaggtatattcagaatttgaataaaatgcagacagaaatatattgaaaacgagggtgttagaacagaagtttttcagaaaaccctcgcgcaaaagcacgagggtttgcagaagaggaagattatccggtgttacgcatacctgccgcaatcccggcaatagtgaccattaa < 1:279334‑M1/251‑247 (MQ=255) | GGCTCATGGTCTGAGCAAACAGAATGCCCTCATCACCAATCGCTTTTTGCAGACGCGGCAGCACTTCCCATATGGACTCCTTGCTGGCAGCGATAATGCTCGGGTTAGTTGTCACCCCGGCAATGGGGAATATGCGTGCCAGACGTTCGACTTCTGCGACGTTAGCGGTGTCCAGATACAGTTCCATGATGTTTCCTTTTACAGTTCCAGTTCATGTTGCAGCAGGCTGGCGATAGCGTCGGCAGAGGCGGCGTTAACCAGCGCGTTACGGAATTCTTCGTGCATGATGCGGCGAGCGAGGCGCGAGAAAATGCGCATATGCTGATCGCCCGCAGCGTGTTTGTTCAGGGTTAACATAATGATGAATTGCGCTTCATCATCGCCCCAGCGCACCGGCGCTTGCAGACGCGCCACGCTGATGGTGGATTGCTCAATGTGTTCTGATTTGCTGTGTGGAATGGCAAAACTAAAGCCCAGACCGGTAGAGAAAACGGC > NC_000913/4139522‑4140016 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |