| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,707,484 | +GA :: IS3 (+) +4 bp | coding (219‑222/1608 nt) | dppA ← | dipeptide ABC transporter periplasmic binding protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 315229 = | NA (NA) | 19 (0.570) +TC |
17/482 | 0.8 | 100% | noncoding (1/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | = 3707487 | 0 (0.000) | coding (219/1608 nt) | dppA | dipeptide ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 2171428 | NA (NA) | 17 (0.500) | 16/486 | 0.9 | 100% | noncoding (1258/1258 nt) | IS3 | repeat region |
| ? | NC_000913 | 3707484 = | 0 (0.000) | coding (222/1608 nt) | dppA | dipeptide ABC transporter periplasmic binding protein | |||||
TCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTGCTCCAATTGTGATGTTTGTT > NC_000913/3707240‑3707732 | gagcgcaaaaggttgctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccagggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCg < 2:136258‑M2/7‑1 (MQ=255) gttgctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatcaatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtacggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatccCACTTCGGTGGTGccgct > 1:167062‑M2/234‑249 (MQ=255) tgctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGAtt < 1:111855‑M2/19‑1 (MQ=255) gccgccAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcag < 2:177744‑M2/249‑54 (MQ=255) gcacgagtcagcctatgtgtggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGt < 1:97280‑M2/62‑1 (MQ=255) gAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactc > 2:247868‑M2/1‑189 (MQ=255) ggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAggt < 1:191480‑M2/69‑1 (MQ=255) gaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaataacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCTTCATAGGTGGTGCCGGAGGTAAACa < 1:214392‑M2/86‑1 (MQ=255) tttttCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagt > 2:277361‑M2/1‑162 (MQ=255) ttCTGACGATCGAAATAGAACCCCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACCTCCCACTTTTCAGCGAGGCCCGGGATCACTgagcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaa > 2:179604‑M2/1‑159 (MQ=255) cgggaaataatgcgggcatcggtgtttaattatatcgaatgtgattacaatcggtggcggcggcactgttggtgtggctgcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCTGATTTTTAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCAGAGGTGGTTGCGGAGGTAAACAGCTGCGGGTTAAAcc < 1:123216‑M2/101‑1 (MQ=255) gATCGAACGAGAACACCCCATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccg < 1:282316‑M2/251‑100 (MQ=255) gATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccg < 1:64389‑M2/251‑100 (MQ=255) gaACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcat < 1:10138‑M2/251‑110 (MQ=255) ggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCt < 1:138115‑M2/115‑1 (MQ=255) aacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCCGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCt > 1:319600‑M2/134‑251 (MQ=255) aacggtgtttaattatatcgaatgtgattacaatcggtggaggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgattaggactgtgtccatcttacgtgggtaggatcaAACTTCGGTGGTGCCGATTTTAAATTCAAACAGACGGTTATTAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGGAAACAGCTGCGGGTTaaaaccttacgggaatcattct > 2:133334‑M2/134‑241 (MQ=255) ggggttgaattatatcgaatgtgattacaatcggtggcggaggcacagttgggtgggcggcctcagtccggaacaatgtgaaaacaagaacctcgcttaggcgggtgtccatattacgtggttaggatcaCACGTCGGTGGTGTCGATTTTAAATTCAACCAGACGGTTATAAAGCGTGACGGAAGAGGCGTCATAGGGGGTGCAGGAGGTAAACAGCTGCGGGTTAATCCCTTCCGGAGAGCCTTCTGAg < 2:168482‑M2/121‑1 (MQ=255) gtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCaa < 1:175562‑M2/124‑1 (MQ=255) cGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTCTCGTGCCACTTCACCACTTTACGCAGATGGAAGGTATAGGCTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggccacgcggctaagtgagtaacctctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcc < 1:163722‑M2/251‑124 (MQ=255) ttcaCGCGTCGGTTTGCATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagcc < 1:268479‑M2/251‑134 (MQ=255) tcaCGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAATGTATAGGTTTTACCGTCTGCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagag > 1:345350‑M2/1‑117 (MQ=255) tcaCGCGTCGGTTTGAATTATTTATTGTAGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagag < 2:345350‑M2/172‑56 (MQ=255) gTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGCTCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgc < 1:142366‑M2/251‑145 (MQ=255) gtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggccggtgtccatattacgtggggaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGGGCCGGAGGTAAACAGCTGCGGGTTAAACCCTGCTGGAGATCCTTTTGAGCAATAAACCAGAGTTTTAGCCTGAACACTtgct < 1:328386‑M2/154‑1 (MQ=255) gTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgtt < 2:267018‑M2/251‑161 (MQ=255) gCCACTTCACACCTTTACGCAGATGGAATGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgc > 1:57330‑M2/1‑86 (MQ=255) cggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTg < 1:249304‑M2/178‑1 (MQ=255) cacCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTCTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccg > 1:124114‑M2/1‑77 (MQ=255) ctgGAAGGTATCAGTTTTACCGCCTTCGCTGACTTCCCACTCTTGAGCGAGGCACGCGATCACTgatcttaccccggaatagcggacacgcggctaagtgagtacactctcagtcagaggtgactcacatgaccaaaacagtatcaaccagtaaaaaaccccgtcaacagcattcgcctgaatttcgcagtgaagccctgaaccttgctgaacgcatcggcgttactgccgcagcccgtgacctcagcctg < 2:158423‑M2/250‑188 (MQ=255) tgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATccc < 1:85662‑M2/198‑1 (MQ=255) ccGTCTTCGCTGACTTCCACCTTTTCAGCGAGGCCCGGGATCACTgatcttacccagcaatagtggacacgcggctaactgagtaacctctcagtcagaggtgactcacatgaccaaaacagtatcaaccagtcaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcgatgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctacc < 2:317033‑M2/251‑207 (MQ=255) cGCTGACTTCCCACTTTTCAGCGAGGCCCGAGATCACTgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgctgcagcccgtgaactcagcctgtatgaatcacaactctacaactggc > 1:871‑M2/1‑38 (MQ=255) ttCCCACTTTTCAGCGAGGCCCGGGATCACTgatctccaccagccatagtggatacgcggccaactgagtaaactctccgtcagaggtgactcacatgcccaaaaaagtatcaaccagtaaacaacaccgtaaacagcattcgcatgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtat < 1:322991‑M2/221‑191 (MQ=255) acgtgggtaggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTGCTCCAAt < 1:95382‑M2/236‑1 (MQ=255) ggatcaCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATCCGCATTATTCTGCTCCAATTGTGAtgtt > 1:224703‑M2/7‑251 (MQ=255) cacACTTCGGTGGTGCCGATTTTAAATTCAACCAGAGGGTCAAACAGCCCGACGGAAGAGACGTAATAACAGGTGCAAGAAGCAAAAAGCTGCGGGTCAAACCCTTACGGAGATCCTTCTGAGCAATAAACCAGAGTTTTCGACTGAACACTTGATGCGACGATCATAGCCATCAGGCTGAGACCCAGCTTCAGCATCCCTGACTTTTACAAGGAAATACGCATTATTCTGCTCCAATTGTGAtgtttgat > 1:333600/3‑249 (MQ=255) | TCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCGTTTTTCTGACGATCGAACGAGAACACCACATCATCGGCGTTCAGTTCACGCGTCGGTTTGAATTCTTTATTGTCGTGCCACTTCACACCTTTACGCAGATGGAAGGTATAGGTTTTACCGTCTTCGCTGACTTCCCACTTTTCAGCGAGGCCCGGGATCACTTCGGTGGTGCCGATTTTAAATTCAACCAGACGGTTATAAAGCGGGACGGAAGAGGCGTCATAGGTGGTGCCGGAGGTAAACAGCTGCGGGTTAAACCCTTCCGGAGATCCTTCTGAGCAATAAACCAGAGTTTTAGCCTGAACACTTGCTGCGACGGTCATAGCCACCAGGCTGAGACCAAGCTTCAGCATCCCTGACTTTTTCAAGGAAATACGCATTATTCTGCTCCAATTGTGATGTTTGTT > NC_000913/3707240‑3707732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |