| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,235,905 | 16376 bp→AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC | yjbE–malM | yjbE, yjbF, yjbG, yjbH, yjbT, psiE, xylE, malH, malG, malF, malE, malK, lamB, malM | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4235905 | 4252280 | 16376 | 23 [0] | [0] 29 | yjbE–malM | yjbE,yjbF,yjbG,yjbH,yjbT,psiE,xylE,malH,malG,malF,malE,malK,lamB,malM |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4235904 | 0 (0.000) | 23 (0.860) +AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC |
22/382 | 0.3 | 100% | intergenic (+497/‑2) | pgi/yjbE | glucose‑6‑phosphate isomerase/uncharacterized protein YjbE |
| ? | NC_000913 | 4252281 = | 0 (0.000) | intergenic (+1807/‑225) | malM/ubiC | maltose regulon periplasmic protein/chorismate lyase | |||||
TCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCC > NC_000913/4252047‑4252517 | gtttatgctttttattgttatttacatataagttgaaacttatatttgatattcattctaattatcctaaaacgccatcgctaattccccacgccgtaattcgcatgctttagttgtgtatactcgctccctcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtatgtaaagaaaaacatcaactttcgcaacagataatgccgctttgcggccgcTAAGTAAAGGAAAACAt > 2:123184‑M2/235‑251 (MQ=255) ttatttttatttaaatataagttgaaacttagatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaagtcgcatgctttagttgtgtatactcgatccctcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttctcaaaggaaaatgccgagttgcggccgcTAAGTTAAGGAAAACATCTCCGTTCCt < 2:324132‑M2/27‑1 (MQ=255) ttattgttatttaaatataagttgaaacttatatttgatattcattctaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTg > 1:344206‑M2/224‑251 (MQ=255) ttgttatttaaatataagttgaaacttatatttgatattcattacaattatcctaaaacgccatcgctacttccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcacaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGc > 1:21215‑M2/221‑250 (MQ=255) acttatatttgctattacttccacttatcctaaaacgacatagctaattccccgccccgtaattcgcatgctttacttgtgtatactcgatcccgcccgaactgtttttgggcaaatctccattcattcaatgaagggaaattgtaagtaacggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAAAATCACCGTTCCTGTCATCCTGGACGGTGATGCCCCTACg > 2:171014‑M2/198‑251 (MQ=255) tcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtttatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagtgaaattgtaagtaaaggaaagcagcaacgttcgcaaaagaaaatgccgatttgcggccgct < 1:18026‑M2/1‑1 (MQ=255) tcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgct > 2:18026‑M2/183‑183 (MQ=255) aaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGc < 1:3757‑M2/86‑1 (MQ=255) cgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTTATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTa < 2:8000‑M2/89‑1 (MQ=255) atcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGt > 2:139312‑M2/159‑251 (MQ=255) aattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGTTTCAACa < 2:344206‑M2/99‑1 (MQ=255) aattccccgcgccgtaattcgcatgcgttagttgtgtatactcgatcccgcccgaaatgtttttggggaaatctccattcattcaatgaagggaaattgtaagtaaaggagaacatcaacgttcgcaaaagaaaatgccgatttgcgaccgcTATGTAAATGAAAACATCACCGGTCCTTGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGc < 1:324096‑M2/69‑1 (MQ=255) aattcaccgcgccgtaattcgcatgctttagttgtgtatactagatcccgcccgaaatgtttttgggtaaatctccattcactcaatgaagggaaattgtaagtaaaggaaaacatccacgttcgcaaaagacaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGTCCTCGCCAGc > 2:324096‑M2/153‑221 (MQ=255) aattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTc > 1:81737‑M2/138‑251 (MQ=255) tctttagttgtgtatactcgatcccgcccgaaatgttttggggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcGAAGTAAAGGAAAACATCTCCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCAGCGGTAAAGCGTAAGGTTCAACAGCGGTTTACCACTTCATGCGAtt < 2:345602‑M2/122‑1 (MQ=255) gctttagttgtgtctactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagtgaaattttaagtaaaggaaaacatcaacgttcgcaacagaaaatgccgatttgcggccgcTAAGTAAACGAAAACATCCCCGTTCCTGGCATCCGGGACGGTGATGCCCCTACGGTTGCCCTCTCCAGCACGGGCAGCGGTAAAGCGTAAGGTTCAGCATCGTTTAACCACTTCATTCGAtt < 2:200632‑M2/122‑1 (MQ=255) gtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTttg > 2:142145‑M2/118‑251 (MQ=255) gatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTAt > 2:219293‑M2/110‑251 (MQ=255) gagcccgcccgaaatgtgtttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgattggcggccgcTAAGTAAAGGAAAACAGCACCCTGGCTGGCATCCTGGACGATGATGCTCCTACGGTTGCCCTCGCCAGCACGGTCATCGGTAAAGCGTAAGGTTCAACATCCTGTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTAt < 1:151864‑M2/142‑1 (MQ=255) atctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAAc < 2:178346‑M2/98‑1 (MQ=255) atctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaaagttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAAc > 1:178346‑M2/83‑180 (MQ=255) attcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAacac > 1:34785‑M2/73‑251 (MQ=255) gtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGc > 1:295982‑M2/55‑251 (MQ=255) ggaaaacattaacgttcgcaaaagaaaatccctatttgcggccgcTAAGGAAAGGAAAACGTCGCCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTATTACCACATCATGCGATTGTTGCGTTTTTGTTTCGTATTAGATCACTGAAGGTGCTTTACAGCTCCCGTAAACAGTTTTCTGCTATACAATGCCTTTACgtg < 2:230872‑M2/206‑2 (MQ=255) gaaaacataaacgttcgcaaaagcaaatgccgctttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTTCCACTTCATGCGCTTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACCCTTTTCTGCGATACAATGCCTTTACGtt > 2:120364‑M2/45‑250 (MQ=255) catcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTa > 1:268011‑M2/40‑250 (MQ=255) gcaaaagaaaatgccgatttgaggcagcTAAGTAAAGGAAAATATAACCGTTCCAGGCATCCTGGCCGGTGAGGCCCCTACGGTTGCCCTCGCCCGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCCTGCGATTGTTGCGTTTTTGTTGCGTATTAGTTCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCg > 2:326452‑M2/29‑251 (MQ=255) atgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGCGAGTTCGGCATGTcac > 1:300‑M2/19‑250 (MQ=255) cgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAACGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACAcccc < 2:81737‑M2/237‑1 (MQ=255) | TCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCC > NC_000913/4252047‑4252517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |