| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,235,905 | 16376 bp→AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC | yjbE–malM | yjbE, yjbF, yjbG, yjbH, yjbT, psiE, xylE, malH, malG, malF, malE, malK, lamB, malM | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4235905 | 4252280 | 16376 | 23 [0] | [0] 29 | yjbE–malM | yjbE,yjbF,yjbG,yjbH,yjbT,psiE,xylE,malH,malG,malF,malE,malK,lamB,malM |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4235904 | 0 (0.000) | 23 (0.860) +AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC |
22/382 | 0.3 | 100% | intergenic (+497/‑2) | pgi/yjbE | glucose‑6‑phosphate isomerase/uncharacterized protein YjbE |
| ? | NC_000913 | 4252281 = | 0 (0.000) | intergenic (+1807/‑225) | malM/ubiC | maltose regulon periplasmic protein/chorismate lyase | |||||
GTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGGTGGGTGTCGCGCTTGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAG > NC_000913/4235723‑4236153 | gTTTATGCTTTTTATTGTTATTTACATATAAGTTGAAACTTATATTTGATATTCATTCTAATTATCCTAAAACGCCATCGCTAATTCCCCACGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGCTCCCTCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTatgtaaagaaaaacatcaactttcgcaacagataatgccgctttgcggccgctaagtaaaggaaaacat > 2:123184‑M1/1‑182 (MQ=255) ttatttttatttAAATATAAGTTGAAACTTAGATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAAGTCGCATGCTTTAGTTGTGTATACTCGATCCCTCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttctcaaaggaaaatgccgagttgcggccgctaagttaaggaaaacatctccgttcct < 2:324132‑M1/250‑80 (MQ=255) ttATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCTAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctg > 1:344206‑M1/1‑171 (MQ=255) ttGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTACAATTATCCTAAAACGCCATCGCTACTTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcacaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggc > 1:21215‑M1/1‑168 (MQ=255) aCTTATATTTGCTATTACTTCCACTTATCCTAAAACGACATAGCTAATTCCCCGCCCCGTAATTCGCATGCTTTACTTGTGTATACTCGATCCCGCCCGAACTGTTTTTGGGCAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaacggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaaaatcaccgttcctgtcatcctggacggtgatgcccctacg > 2:171014‑M1/1‑145 (MQ=255) tcattcCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTTTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGTGAAATTGTaagtaaaggaaagcagcaacgttcgcaaaagaaaatgccgatttgcggccgct < 1:18026‑M1/183‑54 (MQ=255) tcattcCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgct > 2:18026‑M1/1‑130 (MQ=255) aaaCGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagc < 1:3757‑M1/251‑139 (MQ=255) cGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggttatgcccctacggttgccctcgccagcacgggcatcggtaaagcgta < 2:8000‑M1/251‑142 (MQ=255) aTCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggt > 2:139312‑M1/1‑106 (MQ=255) aaTTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaagtttcaaca < 2:344206‑M1/251‑152 (MQ=255) aaTTCCCCGCGCCGTAATTCGCATGCGTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGGAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggagaacatcaacgttcgcaaaagaaaatgccgatttgcgaccgctatgtaaatgaaaacatcaccggtccttgcatcctggacggtgatgcccctacggttgccctcgccagc < 1:324096‑M1/221‑122 (MQ=255) aaTTCACCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTAGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCACTCAATGAAGGGAAATTGTaagtaaaggaaaacatccacgttcgcaaaagacaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgtcctcgccagc > 2:324096‑M1/1‑100 (MQ=255) aaTTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttc > 1:81737‑M1/1‑85 (MQ=255) tctTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTGGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcgaagtaaaggaaaacatctccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcagcggtaaagcgtaaggttcaacagcggtttaccacttcatgcgatt < 2:345602‑M1/249‑175 (MQ=255) gCTTTAGTTGTGTCTACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGTGAAATTTTaagtaaaggaaaacatcaacgttcgcaacagaaaatgccgatttgcggccgctaagtaaacgaaaacatccccgttcctggcatccgggacggtgatgcccctacggttgccctctccagcacgggcagcggtaaagcgtaaggttcagcatcgtttaaccacttcattcgatt < 2:200632‑M1/250‑175 (MQ=255) gtATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttg > 2:142145‑M1/1‑65 (MQ=255) gagcccgcccgaaaTGTGTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgattggcggccgctaagtaaaggaaaacagcaccctggctggcatcctggacgatgatgctcctacggttgccctcgccagcacggtcatcggtaaagcgtaaggttcaacatcctgttaccacttcatgcgattgttgcgtttttgttgcgtat < 1:151864‑M1/248‑195 (MQ=255) gATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtat > 2:219293‑M1/1‑57 (MQ=255) aTCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaac < 2:178346‑M1/180‑151 (MQ=255) aTCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaaagttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaac > 1:178346‑M1/1‑30 (MQ=255) attcaATGAAGGGAAATTGTaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacac > 1:34785‑M1/1‑20 (MQ=255) gtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgctaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacacttttctgcgatacaatgc > 1:295982‑M1/1‑2 (MQ=255) | GTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGGTGGGTGTCGCGCTTGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAATAAAG > NC_000913/4235723‑4236153 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |