| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,262,279 | Δ6,678 bp | [fruK]–[lpxT] | [fruK], fruB, setB, yeiW, yeiP, yeiQ, yeiR, [lpxT] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2262279 | 2268956 | 6678 | 18 [0] | [0] 16 | [fruK]–[lpxT] | [fruK],fruB,setB,yeiW,yeiP,yeiQ,yeiR,[lpxT] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2262278 | 0 (0.000) | 16 (0.510) | 15/490 | 1.1 | 100% | coding (88/939 nt) | fruK | 1‑phosphofructokinase |
| ? | NC_000913 | 2268957 = | 0 (0.000) | coding (104/714 nt) | lpxT | lipid A‑core phosphotransferase | |||||
AAACCCGAGAAGTTGAAGTCGGTCACTTCGCCGTCTTTTTCCGTCA‑GCTTAACGTTAATTCGGGTGCGCCCCTGTACAACC‑TGGAAACGGTTGGCAATGCCCAGCTCGCTGAACAG‑TTGCTGAAAACCATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGG‑CCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGGCAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTCAGCATCTGCACCCTGGGCGGTAAAGCGTAGGCGATGACCTTTCTTAACGCCAAGTGCCACAACTTTCATCAGACTACGTCCGTTTGCCGGTTTGCCGGTAC > NC_000913/2262034‑2262525 | aacccggagagtttGAAGTCGCTCACTTCGCC‑TCCTTTTCCCGCACGTTTAACGTGAATCCGGGTGCCCCCCTGACCAACC‑TGAAAACGGTTGGCAATGCCCAGCGCGCGAAACGG‑TGGCGAAAAACCACCCTGATTGTCTTTCCCCAGGAAGCCGCGACGGGTGCCTTAAATTCCCAGGTTTTTAAATTCTTTGG‑CCACGTTGATGCCTTTCCCCGCCGCATGCAGACCGGTGGTTTTCACCAgatgcgg < 2:213657/239‑7 (MQ=255) cGAGAAGTTGAAGTCGGTCACTTCGCCGTCTTTTTACGTCA‑GCTTAACGTTAATTCGGGTGCGCCCCTGTACAACC‑TGGAAACGGTTGGCAATGCCCAGCTCGCTGAACAG‑TTGCTGAAAACCATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTACCAGGTCTTTTAATACTTTGG‑CCACGTTGATGCCTTTACCCGCAGCATGCAGACCGGTGGTTTTCACCAGatgcggatatt > 2:125845‑M1/1‑240 (MQ=255) aaGTCGGTCACTCCGCCTTCTTTTTCCTACA‑GCTTAACGTAAATTCGGGTGC‑CCCCCGTACAACCCGGGAAACGGTTGGCAATGCCCAGCTCGCTGA‑CAGGTTGCTGAAACCCATCCTGATTTTTTTTCCCCGGGACGCCGCCAACGTGGACATCAATCCCCAGGTCTTTTAATTCTTTGC‑CCCCGTGGATGCTTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAgatgcggatattttttatttct < 2:237735/251‑22 (MQ=255) ttggggggcccccctgtacaacc‑gGGAAACGTTTGCCAATCCCCAGCTCGCTAAAAAG‑TTGCTGAAAACCATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGTTAACATCAATCCCCAGGCCTTTTAATACTTTGC‑CCACGTTATTGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctgg < 2:274241‑M1/240‑64 (MQ=255) gcCCCTGTACAACC‑TGGAAACGGTTGGCAATGCCCAGCTCGCTGAACAG‑TTGCTGAAAACCATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGG‑CCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgac > 1:11620‑M1/1‑178 (MQ=255) gcCCCTGTACAACC‑TGGAAACGGTTGGCAATGCCCAGCTCGCTGAACAG‑TTGCTGAAAACCATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGG‑CCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctgggtgcattgac > 2:192597‑M1/1‑178 (MQ=255) aaCAG‑TTGCTGAAAACCATCCTGATTGTCTTTACCCAGAACGCCACTAACGCTGACATCAATACCCAGGTCTTTTAATACTTTGG‑CCACGATGATCACTTTACCCGCCGCATGCAGACCGGTGGTTTTCACAAGatgcggatcttttttatttctttaatcagaaactggccgaacgtaaggcctttttgtgactggttgcattgaccaacaatcgcgccctcgacggctgttcactgctggcgatgggt > 1:32330‑M1/1‑134 (MQ=255) gAAAACCATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGG‑CCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatg < 2:208153‑M1/249‑126 (MQ=255) aaaacccatcctGATTTTCTTTACCCAGGAAGCCGCAAACGGTGACATCAATCCCCAGGTCTTTAAATACTTTGG‑CCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttctacggttgttcactgctggcgatgggtatgttgatgct < 2:290217‑M1/246‑128 (MQ=255) ccATCCTTATTTTCTTTCCCCAGGAACCGGCAAACGGTGACATCAATCCCCAGGTCTTTTAATA‑TTTGGCCCGCGTTTATGCCTTTCCCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtt < 2:8361‑M1/251‑133 (MQ=255) tCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGG‑CCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaa > 1:183798‑M1/1‑107 (MQ=255) aaGCCCCCAACGGTGACATCAATTCCCAGGTTTTTTAATATTTGGG‑CCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctg < 2:183798‑M1/251‑157 (MQ=255) gccAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGG‑CCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctggc > 1:251361‑M1/1‑90 (MQ=255) ccAGGTCTTTAAATCTTTTGG‑CCCCGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctggcagacgacgtatcgtgattattgg < 1:159901‑M1/251‑182 (MQ=255) cACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctggcagacgacgtatcgtgattattggtctggtcatgctattaactgc > 1:292600‑M1/1‑48 (MQ=255) ccgtggttgcttttacccgccgcatGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgaggggtatgttgatgctgagtgtctggctgaaagaaaacgcccctggcagacgagttatcgtgattattggtctggtcatgctattaactgcag < 1:32290‑M1/240‑205 (MQ=255) gccgcATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctggcagacgacgaatcgtgattattggtctggtcatgctattaactgtaggggtattaaaccagctgg > 2:24641‑M1/1‑29 (MQ=255) ccAGatgcggatattttttatttctttaatcagaaactggacgaaagtcaggcctttatgtggctggttgcattgaacaaaaatcgcgccttcgacggttgttcactgctggcgaagggtatgttgatgctgcgttactggctgaaagaaaacgcccctggcagacgacgtatcgtgattattggtctggtcatgctattaactgaagtggtattaaaccagctgggtcaggcattaattcctgtaaaacg > 1:14471‑M1/1‑4 (MQ=255) | AAACCCGAGAAGTTGAAGTCGGTCACTTCGCCGTCTTTTTCCGTCA‑GCTTAACGTTAATTCGGGTGCGCCCCTGTACAACC‑TGGAAACGGTTGGCAATGCCCAGCTCGCTGAACAG‑TTGCTGAAAACCATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGG‑CCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGGCAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTCAGCATCTGCACCCTGGGCGGTAAAGCGTAGGCGATGACCTTTCTTAACGCCAAGTGCCACAACTTTCATCAGACTACGTCCGTTTGCCGGTTTGCCGGTAC > NC_000913/2262034‑2262525 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |