| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,262,279 | Δ6,678 bp | [fruK]–[lpxT] | [fruK], fruB, setB, yeiW, yeiP, yeiQ, yeiR, [lpxT] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2262279 | 2268956 | 6678 | 18 [0] | [0] 16 | [fruK]–[lpxT] | [fruK],fruB,setB,yeiW,yeiP,yeiQ,yeiR,[lpxT] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2262278 | 0 (0.000) | 16 (0.510) | 15/490 | 1.1 | 100% | coding (88/939 nt) | fruK | 1‑phosphofructokinase |
| ? | NC_000913 | 2268957 = | 0 (0.000) | coding (104/714 nt) | lpxT | lipid A‑core phosphotransferase | |||||
CCACCGGACAGCCGTATTGAGCTGATTTCCAGCAGCGAAGCTGACTGGAATGCCTTGCAGAGCGCGCTGTTGAAGCTTCGTTTAGCGACTACCGCGTAAGGTTGCCTGCGTTTTTCAGTAAGATAATTAGAGAAAATATGATTAAAAATTTGCCGCAAATAGTGTTGTTGAATATTGTCGGCCTCGCGCTGTTTCTTTCCTGGTATATCCCCGTTAATCATGGATTCTGGTTGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATTGGTCTGGTCATGCTATTAACTGCAGTGGTATTAAACCAGCTGGGTCAGGCATTAATTCCTGTAAAACG > NC_000913/2268717‑2269203 | cgagaagttgaagtcggtcacttcgccgtctttttacgtcagcttaacgttaattcgggtgcgcccctgtacaacctggaaacggttggcaatgcccagctcgctgaacagttgctgaaaaccatcctgattgtctttacccaggaagccgccaacggtgacatcaattaccaggtcttttaatactttggccacgttgatgcctttacccgcagcatgcagaccggtggttttcaccagATGCGGATAtt > 2:125845‑M2/241‑251 (MQ=255) ttggggggcccccctgtacaaccgggaaacgtttgccaatccccagctcgctaaaaagttgctgaaaaccatcctgattgtctttacccaggaagccgccaacgttaacatcaatccccaggccttttaatactttgcccacgttattgcctttacccgccgcatgcagaccggtggttttcaccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTgg < 2:274241‑M2/63‑1 (MQ=255) gcccctgtacaacctggaaacggttggcaatgcccagctcgctgaacagttgctgaaaaccatcctgattgtctttacccaggaagccgccaacggtgacatcaattcccaggtcttttaatactttggccacgttgatgcctttacccgccgcatgcagaccggtggttttcaccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGAc > 1:11620‑M2/179‑251 (MQ=255) gcccctgtacaacctggaaacggttggcaatgcccagctcgctgaacagttgctgaaaaccatcctgattgtctttacccaggaagccgccaacggtgacatcaattcccaggtcttttaatactttggccacgttgatgcctttacccgccgcatgcagaccggtggttttcaccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGGTGCATTGAc > 2:192597‑M2/179‑251 (MQ=255) aacagttgctgaaaaccatcctgattgtctttacccagaacgccactaacgctgacatcaatacccaggtcttttaatactttggccacgatgatcactttacccgccgcatgcagaccggtggttttcacaagATGCGGATCTTTTTTATTTCTTTAATCAGAAACTGGCCGAACGTAAGGCCTTTTTGTGACTGGTTGCATTGACCAACAATCGCGCCCTCGACGGCTGTTCACTGCTGGCGATGGGt > 1:32330‑M2/135‑250 (MQ=255) gaaaaccatcctgattgtctttacccaggaagccgccaacggtgacatcaattcccaggtcttttaatactttggccacgttgatgcctttacccgccgcatgcagaccggtggttttcaccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATg < 2:208153‑M2/125‑1 (MQ=255) aaaacccatcctgattttctttacccaggaagccgcaaacggtgacatcaatccccaggtctttaaatactttggccacgttgatgcctttacccgccgcatgcagaccggtggttttcaccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCTACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCt < 2:290217‑M2/127‑1 (MQ=255) ccatccttattttctttccccaggaaccggcaaacggtgacatcaatccccaggtcttttaatatttggcccgcgtttatgcctttccccgccgcatgcagaccggtggttttcaccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGtt < 2:8361‑M2/132‑1 (MQ=255) tctttacccaggaagccgccaacggtgacatcaattcccaggtcttttaatactttggccacgttgatgcctttacccgccgcatgcagaccggtggttttcaccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaa > 1:183798‑M2/108‑249 (MQ=255) aagcccccaacggtgacatcaattcccaggttttttaatatttgggccacgttgatgcctttacccgccgcatgcagaccggtggttttcaccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTg < 2:183798‑M2/156‑1 (MQ=255) gccaacggtgacatcaattcccaggtcttttaatactttggccacgttgatgcctttacccgccgcatgcagaccggtggttttcaccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGc > 1:251361‑M2/91‑248 (MQ=255) ccaggtctttaaatcttttggccccgttgatgcctttacccgccgcatgcagaccggtggttttcaccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtgg < 1:159901‑M2/181‑1 (MQ=255) cacgttgatgcctttacccgccgcatgcagaccggtggttttcaccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATTGGTCTGGTCATGCTATTAACTGc > 1:292600‑M2/49‑250 (MQ=255) ccgtggttgcttttacccgccgcatgcagaccggtggttttcaccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGAGGGGTATGTTGATGCTGAGTGTCTGGCTGAAAGAAAACGCCCCTGGCAGACGAGTTATCGTGATTATTGGTCTGGTCATGCTATTAACTGCAg < 1:32290‑M2/204‑1 (MQ=255) gccgcatgcagaccggtggttttcaccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGAATCGTGATTATTGGTCTGGTCATGCTATTAACTGTAGGGGTATTAAACCAGCTgg > 2:24641‑M2/30‑251 (MQ=255) ccagATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGACGAAAGTCAGGCCTTTATGTGGCTGGTTGCATTGAACAAAAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGAAGGGTATGTTGATGCTGCGTTACTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATTGGTCTGGTCATGCTATTAACTGAAGTGGTATTAAACCAGCTGGGTCAGGCATTAATTCCTGTAAAACg > 1:14471‑M2/5‑251 (MQ=255) | CCACCGGACAGCCGTATTGAGCTGATTTCCAGCAGCGAAGCTGACTGGAATGCCTTGCAGAGCGCGCTGTTGAAGCTTCGTTTAGCGACTACCGCGTAAGGTTGCCTGCGTTTTTCAGTAAGATAATTAGAGAAAATATGATTAAAAATTTGCCGCAAATAGTGTTGTTGAATATTGTCGGCCTCGCGCTGTTTCTTTCCTGGTATATCCCCGTTAATCATGGATTCTGGTTGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATTGGTCTGGTCATGCTATTAACTGCAGTGGTATTAAACCAGCTGGGTCAGGCATTAATTCCTGTAAAACG > NC_000913/2268717‑2269203 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |