| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,262,279 | Δ6,678 bp | [fruK]–[lpxT] | [fruK], fruB, setB, yeiW, yeiP, yeiQ, yeiR, [lpxT] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2262279 | 2268956 | 6678 | 20 [0] | [0] 18 | [fruK]–[lpxT] | [fruK],fruB,setB,yeiW,yeiP,yeiQ,yeiR,[lpxT] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2262278 | 0 (0.000) | 18 (0.500) | 17/484 | 1.0 | 100% | coding (88/939 nt) | fruK | 1‑phosphofructokinase |
| ? | NC_000913 | 2268957 = | 0 (0.000) | coding (104/714 nt) | lpxT | lipid A‑core phosphotransferase | |||||
ACTTCAAAACCCGAGAAGTTGAAGTCGGTCACTTCGCCGTCTTTTTCCGTCAGCTTAACGTTAATTCGGGTGCGCCCCTGTACAACCTGGAAACGGTTGGCAAT‑GCCCAGCTCGCTGAACAGTTGCTGAAAACC‑ATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGGCAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTCAGCATCTGCACCCTGGGCGGTAAAGCGTAGGCGATGACCTTTCTTAACGCCAAGTGCCACAACTTTCATCAGACTACGTCCGTTT > NC_000913/2262028‑2262509 | aCTTCAAAACCAGAGAAGTTGAAGTCGTTCACTTCGCCGTTTTTTTCCGTCAGCTTATCGTTAATTCGGTGGCGCCCCTGTACACCCGGGAAACGGTGGGCAAT‑GCCCAGCGCGCTGAGCAGTTGTTGAAACCC‑ACCCTGATTGTCTTTCCCCAGGAGGCCGCCAAGGGTTAAATCAATCCCCAGGTCTTTGAATGTTTTGTCCACGGTAATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAg < 1:372175/251‑1 (MQ=255) cAAAACCCGAGAAGTTGAAGTCGGTCACTTCGCCGTCTTTTTCCGTCAGCTTAACTTTAATTCGGGTGCCCCCCTGTACAACCTGGAACCGGTTGGCAAT‑GCCCAGCTCGCTGAACAGTTGCTGAAACCC‑ATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTCCCCGCCGCATGCAGACCGGTGGTTTTCACCAGatg < 1:329992‑M1/250‑4 (MQ=255) aaaaCCCGAGAAGTTGAATGCGGTCACTTCCCCTTCTTTTTCGGTCAGTTTAACGTAAATTCGGTGGCGCCCCTTTACACCCTGGAAACGTTTGGAAAT‑GCCCAGCTGGCTGAACAGTGGC‑GAAAACCCATCCTGATTGTCTTTACCCAGGAACCCCCCAACGGTGACATCAATTCCCAGGTCTTTTAATTCTTTGGCCACGTTGATGCCTTTCCCCGCCGCATGCAGACCGGTGGTTTTCACCAgatgcg < 2:264898/251‑6 (MQ=255) gagaAGTTGAAGTCGGTCACTTCGCCGTCTTTTTCCGTCAGCTTAACGTTAATTCGGGTGCGCCCCTGTACAACCTGGAAACGGTTGGCAAT‑GCCCAGCTCGCTGAACAGTTGCTGAAAACC‑ATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattt > 2:315890‑M1/1‑239 (MQ=255) cTTAACGTTAATTCGGGTGCGCCCCTGTACAACCTGGAAACGGTTGGCAAT‑GCCCAGCTCGCTGAACAGTTGCTGAAAACC‑ATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggccttt > 2:27156‑M1/1‑198 (MQ=255) gcCCCTGTACAACCTGTAAACGGTTGGCAATAACCCA‑CTCGCTGAACAGTTGCTGAAAACC‑ATCCTGATTGTCTTTACCCAGGAAGCCACCAAAGGGGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgac > 1:180292‑M1/1‑178 (MQ=255) ccccTGTACAACCTGGAAACGGTTGGCAAT‑GCCCAGCTCGCTGAACAGTTGCTGAAAACC‑ATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaaacagaaactggtcgaaagtaaggcctttttgtggctggttgcatttacc > 2:271149‑M1/1‑177 (MQ=255) ccTGTACAACCTGGAAACGGTTGGCAAT‑GCCAAGCTCGCTGAACAGTTACTGAAACCC‑ATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgccca > 1:234846‑M1/1‑175 (MQ=255) gAAACGGTTGGCAAT‑GCCCAGCTCGCTGAACAGTTGCTGAAAACC‑ATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttttttctttatcaagaacttgtcggaaggaaaggctttttttgggttggttgcatttcccaacaatcgccccttc > 2:143832‑M1/1‑162 (MQ=255) c‑ATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagttt > 1:205209‑M1/1‑118 (MQ=255) ggAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccc > 1:262836‑M1/1‑97 (MQ=255) cAGGACTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGATTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctggcagacgacgtatcgtgattattggg > 1:223087‑M1/1‑69 (MQ=255) gggtCTTTTAATACTTTGGCCACGTTGATGCTTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctggcagacgacgtatcgtgattattggtc < 1:27156‑M1/250‑184 (MQ=255) gtcaggttgatGCTTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcacggctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctggcagacgacgtatcgtgattattggtctggtcatgctattaactg < 2:263125‑M1/246‑202 (MQ=255) ccgccgCATGCAGACCGGTGTTTTTCACCAGatgcggatattttttatttctttaatcagaaactgtgcgaaagtaagtcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctggcagacgacgtatcgtgattattggtctggtcatgctattaactgcagtggtattaaaccagct < 1:195341‑M1/251‑221 (MQ=255) ccgccgCATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctggcagacgacgtatcgtgattattggtctggtcatgctattaactgcagtggtattaaaccagct < 1:286999‑M1/251‑221 (MQ=255) cgccgcATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctggcagacgacgtatcgtgattattggtctggtcatgctattaactgcagtggtattaaaccagctg < 1:339784‑M1/251‑222 (MQ=255) gcATGCAGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctggcagacgacgtatcgtgattattggtctggtcatgctattaactgcagtggtattaaaccagctgggtc < 2:328133‑M1/251‑226 (MQ=255) gccaaccggTGGGTTTCACCAGgtgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctggcagacgacgtagcgtgattattggtctggtcatgctattaactgcagtggtattaaaccagctgggtcaggc < 1:143832‑M1/247‑230 (MQ=255) aGACCGGTGGTTTTCACCAGatgcggatattttttatttctttaatcagaaactggtcgaaagtaaggcctttttgtggctggttgcattgaccaacaatcgcgccttcgacggttgttcactgctggcgatgggtatgttgatgctgagtttctggctgaaagaaaacgcccctggcagacgacgtatcgtgattattggtctggtcatgctattaactgcagtggtattaaaccagctgggtcaggcat > 1:308545‑M1/1‑20 (MQ=255) | ACTTCAAAACCCGAGAAGTTGAAGTCGGTCACTTCGCCGTCTTTTTCCGTCAGCTTAACGTTAATTCGGGTGCGCCCCTGTACAACCTGGAAACGGTTGGCAAT‑GCCCAGCTCGCTGAACAGTTGCTGAAAACC‑ATCCTGATTGTCTTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGGCAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTCAGCATCTGCACCCTGGGCGGTAAAGCGTAGGCGATGACCTTTCTTAACGCCAAGTGCCACAACTTTCATCAGACTACGTCCGTTT > NC_000913/2262028‑2262509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |