| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,485,658 | Δ5,170 bp | [yhfA]–[pabA] | [yhfA], crp, yhfK, argD, yrfJ, [pabA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3485658 | 3490827 | 5170 | 36 [0] | [1] 37 | [yhfA]–[pabA] | [yhfA],crp,yhfK,argD,yrfJ,[pabA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3485657 | 0 (0.000) | 36 (0.980) | 35/474 | 0.2 | 100% | coding (162/405 nt) | yhfA | OsmC family protein YhfA |
| ? | NC_000913 | 3490828 = | 0 (0.000) | coding (2/564 nt) | pabA | aminodeoxychorismate synthase subunit 2 | |||||
GAATCGGCAAGCGCCCGGCATAGTGGCGAATAACGTCAAGGGAGATCCCGGCTTCATCTGGCGTACAGGGGCCAGGTGAGATGACAATTTTTTGTGGTTTAAGGGCGTCGATATCCGCCAGCGTCAACGCATCGTTGCGCTTAACCAGCACATCCGCCCCCAGTTCACAAAAGTACTGGTAGAGGTTCCAGGTAAAAGAATCGTAGTTATCTATAAGCAGGATCATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCGATACCCTGCCAGCTCAGTTGATATCCGGCATGAATCGCCAGTTGCTCGAAGAAGATCCGCTGTGCCAGACCACTTCCCACCCGGAAGGGATGCAGCACGTTGATT > NC_000913/3490604‑3491074 | acgagtgagtaatattcaccgctttttccagcatcaaaaacaatgaacaatatttctcgacagagagatcaacagcacgcgcaactgctgcgtctttcaggacgcgaacggtgacgataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacactcgaccacatcctgccgccctttttgcaggatcATAGCGGATCCGGTACAAAAGAACcgc > 1:341415‑M2/225‑251 (MQ=255) gtaatattcaccgctttttccagcatcaacgccactgaacaatatttctcggcagagagatcaaccgcacgcgcaaccgctgcgtctttcaggtcgcgaccggtgacgataaaatgcagattaatgtgtgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTAtttt < 2:295594‑M2/35‑1 (MQ=255) atattcaccgctttttccagcatcaacgccactgaacaatatttctcggcagagagatcaaccgcacgcgcaaccgctgcgtctttcaggtcgcgaccggtgacgataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAAACGCCCTATTTTACt > 2:65815‑M2/214‑251 (MQ=255) cactgaacaatatttctcggcagagagatcaaccgcacgcgcaaccgctgcgtctttcaggtcgcgaccggtgacgataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTg < 2:300011‑M2/67‑1 (MQ=255) actgaacaatatttctcggcagagagatcaaccgcacgcgcaaccgctgcgtctttcaggtcgcgaccggtgacgataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCCTCGCTTACCACTTTGc > 2:344991‑M2/184‑251 (MQ=255) gaacaatatttctcggcagagagatcaaccgcacgcgcaaccgctgcgtctgtcaggtcgcgaccggtgacgagaaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcatgatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCTGCTTCGCTTACCACTTTGCTa < 2:172999‑M2/70‑1 (MQ=255) caatatttctcggcagagagatcaaccgcacgcgcaaccgctgcgtctttcaggtcgcgaccggtgacgataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgccgcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAat > 1:207176‑M2/178‑250 (MQ=255) ttctcggcagagagatcaaccgcacgcgcaaccgctgcgtctttcaggtcgcgaccggtgacgataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCctct > 2:212529‑M2/172‑251 (MQ=255) gcagagagatcaaccgcacgcgcaaccgctgcgtctttcaggtcgcgaccggtgacgataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTg < 2:42382‑M2/86‑1 (MQ=255) gcgcaaccgctgcgtctttcaggtcgcgaccggggacgataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccatttttgcaggatcATGGCGGCCCCGGGACAAAAGAACCGCGCTTTTTTACTCAGTTTCCCCGGCTTCGCTTACCACTTTGCTAAATATTATCTGCAGTTCGGTGCGATCCCCCATTGc > 2:188248‑M2/147‑251 (MQ=255) tgcgtatttcaggtcgcgacgggtgacgataaaatgcagattaatgtgcgtcaacaggcgtggtgcctcttcgcggcgttaagaggtcaattttacttcaccatcgaacacatcctgacgccctttttgcaggatcATGGCGGCCACGGTACAAAAGAACAGCGCTATTTTACTCAGATTCCCCGGCCTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGCGAGATCCACCATTGCCCCACTCTg > 2:366372‑M2/137‑250 (MQ=255) tcaggtcgcgaccggtgacgataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCCCTCTGATTTGc > 2:16891‑M2/129‑248 (MQ=255) tcaggtcgcgaccggtgacgataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGc < 1:16891‑M2/120‑1 (MQ=255) cggcgcgaccggtgacgataaaatgcagattaatgtgcgtaaacaggcgttgtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgcgctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCTCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGTTGAGATCACCCAGTGCCCCTCGCTTATTTGCTTGAtt < 2:353205‑M2/126‑1 (MQ=255) ccggtgacgataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCct < 1:82944‑M2/134‑1 (MQ=255) cggtgacgataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCAGTGCCCCACTCTGATTTGCCTGATTCCAGGCctc < 2:181890‑M2/135‑1 (MQ=255) gacgataaaatgcagattaatgtgcgtaaacaggcgaggcgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGACACGGTACACAAGAACCGCGCTATTTTACTCAGATTCACCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTACAGGCCTCtttt > 1:218942‑M2/113‑251 (MQ=255) cgataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTATGATTTGCCTGATTCCAGGCCTCTTTTTc > 1:290995‑M2/111‑251 (MQ=255) gataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCg < 1:200520‑M2/142‑1 (MQ=255) ataaaatgcagattaatgtgcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCg > 1:95725‑M2/109‑250 (MQ=255) atgcagattaatgtgcggaaacaggcgtggtgcctcttcgcggcattcagaggccaattttactacacaatcgaccacatccagacgccctttttgcaggaacACGGCCGCTACGGCACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGATTAACTTACCACTTTGCTAAATATCATCTGCAGTGAGGTGAGATCCCCCATTACCCCAACCTGATTTGCCTGATTCCAGGCCTCTTTTTCCATAccc > 1:353979‑M2/104‑251 (MQ=255) gcgtaaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTGTTCGATTCCCTGCCATCTCAGTTg < 2:212563‑M2/162‑1 (MQ=255) taaacaggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCGATACCCTGCCAGCTCAGTTGat > 1:277537‑M2/87‑250 (MQ=255) cagtcttggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCGATACCCTGCCAACTCAGTTGATATCCg < 2:177009‑M2/169‑1 (MQ=255) ggcgtggtgcctcttcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGACCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTGTTCGATACCCTGCCAGCTCAGTTGATATCCGGc < 2:176356‑M2/171‑1 (MQ=255) tcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCGATACCCTGCCAGCTCAGTTGATATCCGGCATGAATCGCCa < 1:127657‑M2/182‑1 (MQ=255) tcgcggcgttcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCGATACCCTGCCAGCTCAGTTGATATCCGGCATGAATCGCCAg < 2:98421‑M2/183‑1 (MQ=255) cggcggtcagaggtcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAATCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTTCCTCTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATAGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCGATTCCCGGCCAGCTCAGTTGATATCCTGAATGAATCTCCAGTGGCt < 2:96779‑M2/188‑1 (MQ=255) tcaattttacttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCGATACCCTGCCAGCTCAGTTGATATCCGGCATGAATCGCCAGTTGCTCGAAGAAGATCCg > 1:223019‑M2/51‑251 (MQ=255) ttcacaatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAAATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCGATACCCTGCCAGCTCAGTTGATATCCGGCATGAATCGCCAGTTGCTCGAAGAAGATCCGCTGTGcc > 1:234304‑M2/41‑248 (MQ=255) aatcgaccacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCGATACCCTGCCAGCTCAGTTGATATCCGGCATGAATCGCCAGTTGCTCGAAGAAGATCCGCTGTGCCAGACCACt > 1:226888‑M2/36‑251 (MQ=255) gaccacatcctgacgcccttgttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTACCTGATTCCAGGCCTCTTTTTCGATACCCTGCCAGCTCAGTTGATATCCGGCATGAATCGCCAGTTGCTCGAAGAAGATCCGCTGTGCCAGACCACTTccc < 2:167059‑M2/220‑1 (MQ=255) accacatcctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCGATACCCTGCCAGCTCAGTTGATATCCGGCATGAATCGCCAGTTGCTCGAAGAAGATCCGCTGTGCCAGACCACTTCCCa < 2:223019‑M2/221‑1 (MQ=255) ccatcctgacgccctttgtgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGAGTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTTCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTGCGATACCCTGCCAGCGCAGTTGATATCCGGCATGACTcgccagttgttcgaagaagatccgagttgccatttcacttcccaccc < 2:212822‑M2/224‑24 (MQ=255) cctgacgccctttttgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTCATTTGCCTGATTCCAGGCCTCTTTTTCGATACCCTGCCAGCTCAGTTGATATCCGGCATGAATCGCCAGTTGCTCGAAGAAGATCCGCTGTGCCAGACCACTTCCCACCCGGa > 1:170220‑M2/24‑250 (MQ=255) tgcaggatcATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCGATACCCTGCCAGCTCAGTTGATATCCGGCATGAATCGCCAGTTGCTCGAAGAAGATCCGCTGTGCCAGACCACTTCCCACCCGGAAGGGATGCAGCACGt > 2:245686‑M2/10‑251 (MQ=255) gATCATGGCGGCTCCGGTACAACAAAACCGCGCCATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGACTCCAGGCCTCTTTTTCGATACCCTGCCAGCTCAGTTGATATCCGGCATGAATCGCCCGTTGCTCGAAGAAGATCCGCTGTGCCAGAACACTTCCCACCCCGAAGGGATGCAGCCCGTTGAtt > 2:354301/1‑251 (MQ=255) | GAATCGGCAAGCGCCCGGCATAGTGGCGAATAACGTCAAGGGAGATCCCGGCTTCATCTGGCGTACAGGGGCCAGGTGAGATGACAATTTTTTGTGGTTTAAGGGCGTCGATATCCGCCAGCGTCAACGCATCGTTGCGCTTAACCAGCACATCCGCCCCCAGTTCACAAAAGTACTGGTAGAGGTTCCAGGTAAAAGAATCGTAGTTATCTATAAGCAGGATCATGGCGGCTCCGGTACAAAAGAACCGCGCTATTTTACTCAGATTCCCCGGCTTCGCTTACCACTTTGCTAAATATCATCTGCAGTGCGGTGAGATCCCCCATTGCCCCACTCTGATTTGCCTGATTCCAGGCCTCTTTTTCGATACCCTGCCAGCTCAGTTGATATCCGGCATGAATCGCCAGTTGCTCGAAGAAGATCCGCTGTGCCAGACCACTTCCCACCCGGAAGGGATGCAGCACGTTGATT > NC_000913/3490604‑3491074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |