| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,485,658 | Δ5,170 bp | [yhfA]–[pabA] | [yhfA], crp, yhfK, argD, yrfJ, [pabA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3485658 | 3490827 | 5170 | 36 [0] | [1] 37 | [yhfA]–[pabA] | [yhfA],crp,yhfK,argD,yrfJ,[pabA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3485657 | 0 (0.000) | 36 (0.980) | 35/474 | 0.2 | 100% | coding (162/405 nt) | yhfA | OsmC family protein YhfA |
| ? | NC_000913 | 3490828 = | 0 (0.000) | coding (2/564 nt) | pabA | aminodeoxychorismate synthase subunit 2 | |||||
ACGAGTGAGTAATATTCACCGCTTTTTCCAGCATCAACGCCACTGAACAATATTTCTCGGCAGAGAGATCAACCGCACGCGCAACCGCTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGAAAAGTTAACCCTTCGACCCACTTCACTCGCGCTTGCATTTTTGCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCAT > NC_000913/3485434‑3485899 | aCGAGTGAGTAATATTCACCGCTTTTTCCAGCATCAAAAACAATGAACAATATTTCTCGACAGAGAGATCAACAGCACGCGCAACTGCTGCGTCTTTCAGGACGCGAACGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACACTCGACCACATCCTGCCGCCCTTTTTGCAGGATCatagcggatccggtacaaaagaaccgc > 1:341415‑M1/1‑224 (MQ=255) gtAATATTCACCGCTTTTTCCAGCATCAACGCCACTGAACAATATTTCTCGGCAGAGAGATCAACCGCACGCGCAACCGCTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGTGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctatttt < 2:295594‑M1/251‑36 (MQ=255) atatTCACCGCTTTTTCCAGCATCAACGCCACTGAACAATATTTCTCGGCAGAGAGATCAACCGCACGCGCAACCGCTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaacgccctattttact > 2:65815‑M1/1‑213 (MQ=255) cACTGAACAATATTTCTCGGCAGAGAGATCAACCGCACGCGCAACCGCTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttg < 2:300011‑M1/251‑68 (MQ=255) aCTGAACAATATTTCTCGGCAGAGAGATCAACCGCACGCGCAACCGCTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcctcgcttaccactttgc > 2:344991‑M1/1‑183 (MQ=255) gAACAATATTTCTCGGCAGAGAGATCAACCGCACGCGCAACCGCTGCGTCTGTCAGGTCGCGACCGGTGACGAGAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCATGATCatggcggctccggtacaaaagaaccgcgctattttactcagattcccctgcttcgcttaccactttgcta < 2:172999‑M1/250‑71 (MQ=255) cAATATTTCTCGGCAGAGAGATCAACCGCACGCGCAACCGCTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCCGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaat > 1:207176‑M1/1‑177 (MQ=255) ttCTCGGCAGAGAGATCAACCGCACGCGCAACCGCTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcctct > 2:212529‑M1/1‑171 (MQ=255) gCAGAGAGATCAACCGCACGCGCAACCGCTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtg < 2:42382‑M1/251‑87 (MQ=255) gcgcAACCGCTGCGTCTTTCAGGTCGCGACCGGGGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCATTTTTGCAGGATCatggcggccccgggacaaaagaaccgcgcttttttactcagtttccccggcttcgcttaccactttgctaaatattatctgcagttcggtgcgatcccccattgc > 2:188248‑M1/1‑146 (MQ=255) tGCGTATTTCAGGTCGCGACGGGTGACGATAAAATGCAGATTAATGTGCGTCAACAGGCGTGGTGCCTCTTCGCGGCGTTAAGAGGTCAATTTTACTTCACCATCGAACACATCCTGACGCCCTTTTTGCAGGATCatggcggccacggtacaaaagaacagcgctattttactcagattccccggcctcgcttaccactttgctaaatatcatctgcagtgcggcgagatccaccattgccccactctg > 2:366372‑M1/1‑136 (MQ=255) tCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgcccccctctgatttgc > 2:16891‑M1/1‑128 (MQ=255) tCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgc < 1:16891‑M1/248‑121 (MQ=255) cggcgcgaccGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTTGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCGCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgctctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcgttgagatcacccagtgcccctcgcttatttgcttgatt < 2:353205‑M1/248‑127 (MQ=255) ccGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcct < 1:82944‑M1/251‑135 (MQ=255) cGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccagtgccccactctgatttgcctgattccaggcctc < 2:181890‑M1/251‑136 (MQ=255) gACGATAAAATGCAGATTAATGTGCGTAAACAGGCGAGGCGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggacacggtacacaagaaccgcgctattttactcagattcaccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattacaggcctctttt > 1:218942‑M1/1‑112 (MQ=255) cGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactatgatttgcctgattccaggcctctttttc > 1:290995‑M1/1‑110 (MQ=255) gATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcctctttttcg < 1:200520‑M1/251‑143 (MQ=255) aTAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcctctttttcg > 1:95725‑M1/1‑108 (MQ=255) aTGCAGATTAATGTGCGGAAACAGGCGTGGTGCCTCTTCGCGGCATTCAGAGGCCAATTTTACTACACAATCGACCACATCCAGACGCCCTTTTTGCAGGAACacggccgctacggcacaaaagaaccgcgctattttactcagattccccggattaacttaccactttgctaaatatcatctgcagtgaggtgagatcccccattaccccaacctgatttgcctgattccaggcctctttttccataccc > 1:353979‑M1/1‑103 (MQ=255) gCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcctcttgttcgattccctgccatctcagttg < 2:212563‑M1/251‑163 (MQ=255) tAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcctctttttcgataccctgccagctcagttgat > 1:277537‑M1/1‑86 (MQ=255) cagtcttggtgcctcttCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcctctttttcgataccctgccaactcagttgatatccg < 2:177009‑M1/245‑170 (MQ=255) ggCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagaccccccattgccccactctgatttgcctgattccaggcctcttgttcgataccctgccagctcagttgatatccggc < 2:176356‑M1/251‑172 (MQ=255) tCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcctctttttcgataccctgccagctcagttgatatccggcatgaatcgccag < 2:98421‑M1/249‑184 (MQ=255) tCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcctctttttcgataccctgccagctcagttgatatccggcatgaatcgcca < 1:127657‑M1/248‑183 (MQ=255) cggcggTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaatcgcgctattttactcagattccccggcttcgctttcctctttgctaaatatcatctgcagtgcggtgagatcccccatagccccactctgatttgcctgattccaggcctctttttcgattcccggccagctcagttgatatcctgaatgaatctccagtggct < 2:96779‑M1/251‑189 (MQ=255) tCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcctctttttcgataccctgccagctcagttgatatccggcatgaatcgccagttgctcgaagaagatccg > 1:223019‑M1/1‑50 (MQ=255) ttCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcaaattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcctctttttcgataccctgccagctcagttgatatccggcatgaatcgccagttgctcgaagaagatccgctgtgcc > 1:234304‑M1/1‑40 (MQ=255) aaTCGACCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcctctttttcgataccctgccagctcagttgatatccggcatgaatcgccagttgctcgaagaagatccgctgtgccagaccact > 1:226888‑M1/1‑35 (MQ=255) gACCACATCCTGACGCCCTTGTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttacctgattccaggcctctttttcgataccctgccagctcagttgatatccggcatgaatcgccagttgctcgaagaagatccgctgtgccagaccacttccc < 2:167059‑M1/251‑221 (MQ=255) aCCACATCCTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcctctttttcgataccctgccagctcagttgatatccggcatgaatcgccagttgctcgaagaagatccgctgtgccagaccacttccca < 2:223019‑M1/251‑222 (MQ=255) ccatCCTGACGCCCTTTGTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagagtccccggcttcgcttaccactttgctaaatatcatcttcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcctcttttgcgataccctgccagcgcagttgatatccggcatgactcgccagttgttcgaagaagatccgagttgccatttcacttcccaccc < 2:212822‑M1/250‑225 (MQ=255) ccTGACGCCCTTTTTGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctcatttgcctgattccaggcctctttttcgataccctgccagctcagttgatatccggcatgaatcgccagttgctcgaagaagatccgctgtgccagaccacttcccacccgga > 1:170220‑M1/1‑23 (MQ=255) tGCAGGATCatggcggctccggtacaaaagaaccgcgctattttactcagattccccggcttcgcttaccactttgctaaatatcatctgcagtgcggtgagatcccccattgccccactctgatttgcctgattccaggcctctttttcgataccctgccagctcagttgatatccggcatgaatcgccagttgctcgaagaagatccgctgtgccagaccacttcccacccggaagggatgcagcacgt > 2:245686‑M1/1‑9 (MQ=255) | ACGAGTGAGTAATATTCACCGCTTTTTCCAGCATCAACGCCACTGAACAATATTTCTCGGCAGAGAGATCAACCGCACGCGCAACCGCTGCGTCTTTCAGGTCGCGACCGGTGACGATAAAATGCAGATTAATGTGCGTAAACAGGCGTGGTGCCTCTTCGCGGCGTTCAGAGGTCAATTTTACTTCACAATCGACCACATCCTGACGCCCTTTTTGCAGGATCGAAACCACATCGATGGCACTGCAACCACCCGCCGCCATCAACACCATTTCCATCGGACTTGGTGCTTTATCGCCTGAGTTGCCGTCCATTAAAATCTGATGACCAGAGGCGGATTCGCCCAGAAAAGTTAACCCTTCGACCCACTTCACTCGCGCTTGCATTTTTGCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCAT > NC_000913/3485434‑3485899 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |