| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,803,431 | IS5 (–) +4 bp | intergenic (‑861/‑1731) | thrS ← / → yniD | threonine‑‑tRNA ligase/uncharacterized protein YniD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 26 (1.100) | 23/496 | 0.2 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1803434 | 0 (0.000) | intergenic (‑864/‑1731) | thrS/yniD | threonine‑‑tRNA ligase/uncharacterized protein YniD | |||||
| * | ? | NC_000913 | 1803431 = | 0 (0.000) | 19 (0.800) | 18/496 | 0.4 | 100% | intergenic (‑861/‑1734) | thrS/yniD | threonine‑‑tRNA ligase/uncharacterized protein YniD |
| ? | NC_000913 | = 2102943 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
AATGTTTAATCAGGTTGACTTTGCCTTTTCCATTTCTCAATGAATCAAGGGCGTATTGCAATGACAGATGGCGACAAAAAATAGCGTCAGAAGGAGATTGCAAAAAACATGCACTACCATTGAGATTTACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1803680‑1803431‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTG < NC_000913/2102943‑2102705 AATGTTTAATCAGGTTGACTTTGCCTTTTCCATTTCTCAATGAATCAAGGGCGTATTGCAATGACAGATGGCGACAAAAAATAGCGTCAGAAGGAGATTGCAAAAAACATGCACTACCATTGAGATTTACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGG > 1:76910/1‑251 ctttgccctataCATTTCTAAATGAATAACGGGCGTATTGCAATGACAGCTCGCGACAAAAAATAGCGTCAGAAGGAGATTGAAAAAAACAT‑CACTACCATTGAGATTTACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCC > 2:34516/13‑251 TTGCCTTTTCCATTTCTCAATGAATCAAGGGCGTATTGCAATGACAGATGGCGACAAAAAATAGCGTCAGAAGGAGATTGCAAAAAACATGCGCTACCATTGAGATTTACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCC < 1:162807/250‑1 ATGAATCAAGGGCGTATTGCAATGACAGATGGCGACAAAAAATAGCGTCAGAAGGAGATTGCAAAAAACATGCACTACCATTGAGATTTACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGT > 2:127479/1‑251 TCAAGGGCGTATTGCAATGACAGATGGCGACAAAAAATAGCGTCAGAAGGAGATTGCAAAAAACATGCACTACCATTGAGATTTACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCT > 2:141059/1‑251 CAAGGGCGTATTGCAATGACAGATGGCGACAAAAAATAGCGTCAGAAGGAGATTGCAAAAAACATGCACTACCATTGAGATTTACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTG > 2:47990/1‑251 CGTATTGCAATGACAGATGGCGACAAAAAATAGCGTCAGAAGGAGATTGCAAAAAACATGCACTACCATTGAGATTTACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCA < 2:145126/251‑1 CAAAAAACATGCACTACCATTGAGATTTACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA > 2:230850/1‑250 GCACTACCATTGAGATTTACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGT > 2:193268/1‑250 ACCATTGAGATTTACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGC < 1:48102/249‑1 AGATTTACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGA < 1:215527/251‑1 AGATTGACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGATCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTC > 2:31273/1‑248 CTGTTGGGTGTATAGTTTTTTTCTCTATGGCTTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAA > 2:101727/1‑250 TAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAAGAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGATAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT > 2:133335/1‑251 CATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAccc > 1:213951/1‑248 CAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACAAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGCTTCTGCCATGGCACAACATGGT > 1:21701/1‑251 CGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCAT > 1:47041/1‑251 ATGCTTCGCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTT > 1:1175/1‑250 GCAAATGGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAAGAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGATAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTG < 1:133335/251‑1 AATGTTTAATCAGGTTGACTTTGCCTTTTCCATTTCTCAATGAATCAAGGGCGTATTGCAATGACAGATGGCGACAAAAAATAGCGTCAGAAGGAGATTGCAAAAAACATGCACTACCATTGAGATTTACTGTTGGGTGTATAGTTTTTTTCTCTATGGATTTTTTTAGACAGTTTCATACAATGGTTACGATCTTCAGCAGTTAACTGTTCCTGTTCAATATAATCCAGTATGCTTCGCAAATGGTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1803680‑1803431‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTG < NC_000913/2102943‑2102705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |