Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,704,350	Δ390 bp		blr	blr

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1704350	1704739	390	46 [0]	[4] 51	blr	blr

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1704349	0 (0.000)	46 (0.810)	38/486	0.5	96.8%	intergenic (‑41/‑202)	ydgJ/blr	putative oxidoreductase YdgJ/beta‑lactam resistance protein
	?	NC_000913	1704740 =	3 (0.050)					intergenic (+64/‑209)	blr/cnu	beta‑lactam resistance protein/H‑NS‑ and StpA‑binding protein

GTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGTCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCTGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAATACCTACCCCTTTGGTATTAATTATTTTATGGACCTTTTATGACTGTTCAGGACTACTTATTAAAATTTCGCAAAATCAGT  >  NC_000913/1704517‑1704990                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                           ttaaacagatgcttcggctcagagacaaccgtaaccgttggccagtcggcttttacttttgtttcatcactgctggagattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgccactaTACCAGTAATTTATTATCTTGTTCGAtg                                                                                                                                                                                                                                 >  2:389316‑M2/224‑251 (MQ=255)  ttAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGTCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCTGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGAtgt                                                                                                                                                                                                                                >  2:161921/1‑251 (MQ=255)   aaacagatgcttcggctcagagacaaccgtaaccgttggccattcggcttttacttttgtttcatcactgctggagattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGAtgtt                                                                                                                                                                                                                               >  2:301804‑M2/222‑251 (MQ=255)    aacagatgcttcggctcagagacaaccgtaaccgttggccagtcggcttttacttttgtttcatcactgctggagattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcatctcattgcagtatgatggctatttgacactaACCCAGGAATTTATTATCTTGTTCGctgttt                                                                                                                                                                                                                              >  2:86951‑M2/221‑250 (MQ=255)          tgcttcggctcagagacaaccgtaaccgttggccagtcggcttttacttttgtttcatcactgctggagattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTg                                                                                                                                                                                                                        >  1:234268‑M2/215‑251 (MQ=255)               cggctcagagacaaccgtaaccgttggccagtcggcttttacttttgtttcatcactgctggagattaccgccagttcctgcccgggcgtgcccgcaatcacgcgcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGGTTGt                                                                                                                                                                                                                   >  1:38806‑M2/210‑251 (MQ=255)                         acaaccgtaaccgttggccagtcggcttttacttttgtttcatcactgctggagattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGt                                                                                                                                                                                                         >  1:549905‑M2/200‑251 (MQ=255)                          caaccgtaaccgttggccagtcggcttttacttttgtttcatcactgctggagattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTa                                                                                                                                                                                                        <  1:102110‑M2/53‑1 (MQ=255)                          aaaccgtatccgtgggccattcggcttttacttttgtttcatcccggtgggagattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTa                                                                                                                                                                                                        <  1:301804‑M2/53‑1 (MQ=255)                                        gaccagtcggcttttacttttgtttcctcactgctggagattaccgccagatcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTActct                                                                                                                                                                                          >  1:467988‑M2/185‑251 (MQ=255)                                           cagtcggcttttacttttgtttcatcactgctggagattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCtttt                                                                                                                                                                                       <  1:48101‑M2/70‑1 (MQ=255)                                                        cttttgtttcatcactgctggagattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAACGCGTTACTCTTTTCAGAGCAGttttt                                                                                                                                                                          >  2:387125‑M2/169‑251 (MQ=255)                                                               ttcatcgctgtgggcgtttcccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtttgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATccc                                                                                                                                                                    <  2:38806‑M2/89‑1 (MQ=255)                                                                 catcgctgcgggagattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGa                                                                                                                                                                 <  1:69740‑M2/92‑1 (MQ=255)                                                                  atcactgctggagattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCTTCCCTGa                                                                                                                                                                 >  1:580742‑M2/159‑250 (MQ=255)                                                                          tggagattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGcc                                                                                                                                                        >  2:197181‑M2/151‑251 (MQ=255)                                                                          gggagattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGcc                                                                                                                                                        <  1:83891‑M2/101‑1 (MQ=255)                                                                             agattaccgccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATc                                                                                                                                                     >  2:154340‑M2/148‑251 (MQ=255)                                                                             agattaccgccagttccagcacgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaaaccggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATATGCCATc                                                                                                                                                     >  2:165367‑M2/148‑251 (MQ=255)                                                                                     gccagttcctgcccgggcgtgcccgcaatcaggggagcatggaagggtttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCAtt                                                                                                                                             <  2:551989‑M2/112‑1 (MQ=255)                                                                                      ccagttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTc                                                                                                                                            <  2:88597‑M2/113‑1 (MQ=255)                                                                                        agttcctgcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCTCATTCtt                                                                                                                                          <  2:8653‑M2/115‑1 (MQ=255)                                                                                               gcccgggcgtgcccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTattatt                                                                                                                                    <  2:164821‑M2/121‑1 (MQ=255)                                                                                                gcgtggcgAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCTGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGt                                                                                                                                  <  1:161921/251‑1 (MQ=255)                                                                                                          cccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACaa                                                                                                                        <  2:124554‑M2/133‑1 (MQ=255)                                                                                                           ccgcaatcaggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtctctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTAGCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAATCGCGTTACTCGTTTCATAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAg                                                                                                                       <  1:274283‑M2/134‑1 (MQ=255)                                                                                                                  caggggcgcattgaaggtgttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTAGTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCGTTTCAGAGCATGTTTTCATCCCTGAATATGTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTtct                                                                                                                 <  2:535951‑M2/140‑2 (MQ=255)                                                                                                                   aggggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACt                                                                                                               <  1:154340‑M2/142‑1 (MQ=255)                                                                                                                      ggcgcatggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcaatgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACtttt                                                                                                            <  2:52158‑M2/145‑1 (MQ=255)                                                                                                                           atcgaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTtgtg                                                                                                        >  2:369224‑M2/102‑250 (MQ=255)                                                                                                                            tggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGa                                                                                                       >  2:468876‑M2/101‑250 (MQ=255)                                                                                                                             ggaaggttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGaa                                                                                                      <  2:433068‑M2/151‑1 (MQ=255)                                                                                                                                  gttttgctcgcataaccatacccaagcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTa                                                                                                <  2:20753‑M2/157‑1 (MQ=255)                                                                                                                                   ttttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTat                                                                                               >  1:378222‑M2/94‑251 (MQ=255)                                                                                                                                     ttgctcgcataaccatacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAAGAACACAAGCGTTCACTTGTGGTGAAATTTTatc                                                                                              <  2:233951‑M2/159‑1 (MQ=255)                                                                                                                                                    tacccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAAtacct                                                                              >  2:101707‑M2/77‑251 (MQ=255)                                                                                                                                                       ccaatcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAAtacctacc                                                                           <  1:101707‑M2/178‑1 (MQ=255)                                                                                                                                                          atcaacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGAAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAATACCTACCCCt                                                                        <  1:473125‑M2/181‑1 (MQ=255)                                                                                                                                                           ccaacccaactcggatgttggcgctcatgtcatggcatctcattgaagtatgatggctatttgactctaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAATACCTACCCCtt                                                                       <  2:115145‑M2/182‑1 (MQ=255)                                                                                                                                                             aacccaacacggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAATACCTACCCCTTTg                                                                     <  1:197181‑M2/184‑1 (MQ=255)                                                                                                                                                                  aacacgcatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGACATTTTATCATCACTAATAATACCTACCCCTTTGGTatt                                                                >  2:98438‑M2/63‑251 (MQ=255)                                                                                                                                                                       ggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGTGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAATACCTACCCCGTTGGTattaatta                                                           <  1:413689‑M2/194‑1 (MQ=255)                                                                                                                                                                       ggatgttgtcgctcatgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAATACCTACCCCTTTGGTattaatta                                                           <  1:387125‑M2/194‑1 (MQ=255)                                                                                                                                                                                      tgtcattgcctctcattgaagtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAATACCTACCCCTTTGGTATTATTTATTTTCTGGACCtttt                                            >  2:253548‑M2/43‑251 (MQ=255)                                                                                                                                                                                                  cGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAATACCTACCCCTTTGGTATTAATTATTTTATGGACCTTTTATGACTGTTc                                  >  2:207723/1‑249 (MQ=255)                                                                                                                                                                                                         agtatgatggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCATCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAATACCTACCCCTTTGGTATTAATTATTTTATGGACCTTTTATGACTTTTCAGGactact                         <  1:333632‑M2/228‑1 (MQ=255)                                                                                                                                                                                                         agtatgatggctatttgacactaAACCAGGAATGTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCTTCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAATACCTACCCCTTTGGTATTAATTATGTTATGGACCTTTTATGACTGTTCAGGactact                         <  2:580742‑M2/228‑1 (MQ=255)                                                                                                                                                                                                               atggctatttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAATACCTACCCCTTTGGTATTAATTATTTTATGGACCTTTTATGACTGTTCAGGACTACttatta                    >  1:286880‑M2/18‑250 (MQ=255)                                                                                                                                                                                                                 ggctagttgacactaAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTAATGTAATAACACAAGCGTTCACGTTTGGTGAAATTTTATCATCACTAATAATACCTACCCCTTTGGTATTAATTATTTTATGGACCTTTTATGACTGTTCAGGACTACTTATTaaa                  <  2:329760‑M2/235‑1 (MQ=255)                                                                                                                                                                                                                              tAAACCAGGAATTTATTATCTTGTTCGATGATGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCCTCTGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAATACCTACCCATTTGGTATTAATTATTTTATGGACCTTTTATGACTGTTCAGGACTACTTATTAAAATTTCGCAAAATc     >  1:522187/1‑250 (MQ=255)                                                                                                                                                                                                                                aaCCAGTAATTTATTATCTTGTTCGATGATGTTGGGGCTTGTCAGGAATAGTAAAGCGCGATACGCTTTTCAGATCAGATTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAATCGTTCACTTTTGTTGAAATTTTATCATCACTAATAATACTTACCCCTTTGATGTTAATTATTTTATGGACCTTTTATGACTTGTCAGCACTACTTATTATAATTTCGCTACATCAGt  >  1:149245/1‑251 (MQ=255)                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                           GTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGTCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAAGCTCTGCACTTGTGGAGCGACATGCTGCCCGTCCGGGTGCATGTTTTCACTTGTCGGATATTAAACCAGGAATTTATTATCTTGTTCGATGTTGTTGGTGATTGTCAGGGATAGTAAAGCGCGTTACTCTTTTCAGAGCAGTTTTTCATCCCTGAATATTTGCCATCAGCGCATTCTTATTATTGTAATAACACAAGCGTTCACTTTTGGTGAAATTTTATCATCACTAATAATACCTACCCCTTTGGTATTAATTATTTTATGGACCTTTTATGACTGTTCAGGACTACTTATTAAAATTTCGCAAAATCAGT  >  NC_000913/1704517‑1704990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑