Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,704,350	Δ390 bp		blr	blr

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1704350	1704739	390	46 [0]	[4] 51	blr	blr

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1704349	0 (0.000)	46 (0.810)	38/486	0.5	96.8%	intergenic (‑41/‑202)	ydgJ/blr	putative oxidoreductase YdgJ/beta‑lactam resistance protein
	?	NC_000913	1704740 =	3 (0.050)					intergenic (+64/‑209)	blr/cnu	beta‑lactam resistance protein/H‑NS‑ and StpA‑binding protein

TTAAACAGATGCTTCGGCTCAGAGACAACCGTAACCGTTGGCCAGTCGGCTTTTACTTTTGTTTCATCACTGCTGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTATCCTTTACCCACGCTCAACAGTTTAATAACCTGCCAGCAATAAGGGATGTTGTTTAACTTAAGTCAAAAAAATAGCGAATTTTCCAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGTCTTATTGAATTAACAGGTTGGATCG  >  NC_000913/1704127‑1704584                                                                                                                                                                                                                               |                                                                                                                                                                                                                                            ttAAACAGATGCTTCGGCTCAGAGACAACCGTAACCGTTGGCCAGTCGGCTTTTACTTTTGTTTCATCACTGCTGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGCCACTAtaccagtaatttattatcttgttcgatg                                                                                                                                                                                                                 >  2:389316‑M1/1‑223 (MQ=255)   aaaCAGATGCTTCGGCTCAGAGACAACCGTAACCGTTGGCCATTCGGCTTTTACTTTTGTTTCATCACTGCTGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgtt                                                                                                                                                                                                               >  2:301804‑M1/1‑221 (MQ=255)    aaCAGATGCTTCGGCTCAGAGACAACCGTAACCGTTGGCCAGTCGGCTTTTACTTTTGTTTCATCACTGCTGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCATCTCATTGCAGTATGATGGCTATTTGACACTAacccaggaatttattatcttgttcgctgttt                                                                                                                                                                                                              >  2:86951‑M1/1‑220 (MQ=255)          tGCTTCGGCTCAGAGACAACCGTAACCGTTGGCCAGTCGGCTTTTACTTTTGTTTCATCACTGCTGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtg                                                                                                                                                                                                        >  1:234268‑M1/1‑214 (MQ=255)               cGGCTCAGAGACAACCGTAACCGTTGGCCAGTCGGCTTTTACTTTTGTTTCATCACTGCTGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCACGCGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtggttgt                                                                                                                                                                                                   >  1:38806‑M1/1‑209 (MQ=255)                         aCAACCGTAACCGTTGGCCAGTCGGCTTTTACTTTTGTTTCATCACTGCTGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagt                                                                                                                                                                                         >  1:549905‑M1/1‑199 (MQ=255)                          cAACCGTAACCGTTGGCCAGTCGGCTTTTACTTTTGTTTCATCACTGCTGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagta                                                                                                                                                                                        <  1:102110‑M1/251‑54 (MQ=255)                          aaaccgtatccgtgGGCCATTCGGCTTTTACTTTTGTTTCATCCCGGTGGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagta                                                                                                                                                                                        <  1:301804‑M1/250‑54 (MQ=255)                                        gaccagTCGGCTTTTACTTTTGTTTCCTCACTGCTGGAGATTACCGCCAGATCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactct                                                                                                                                                                          >  1:467988‑M1/3‑184 (MQ=255)                                           cAGTCGGCTTTTACTTTTGTTTCATCACTGCTGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactctttt                                                                                                                                                                       <  1:48101‑M1/251‑71 (MQ=255)                                                        cTTTTGTTTCATCACTGCTGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaaacgcgttactcttttcagagcagttttt                                                                                                                                                          >  2:387125‑M1/1‑168 (MQ=255)                                                               ttcatcgctgtgggcgtttcccgccagttcctgcccgggcgtGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTTTGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccc                                                                                                                                                    <  2:38806‑M1/230‑90 (MQ=255)                                                                 catcgCTGCGGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctga                                                                                                                                                 <  1:69740‑M1/251‑93 (MQ=255)                                                                  atcaCTGCTGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcttccctga                                                                                                                                                 >  1:580742‑M1/1‑158 (MQ=255)                                                                          tgGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgcc                                                                                                                                        >  2:197181‑M1/1‑150 (MQ=255)                                                                          gggaGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgcc                                                                                                                                        <  1:83891‑M1/250‑102 (MQ=255)                                                                             agaTTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatc                                                                                                                                     >  2:154340‑M1/1‑147 (MQ=255)                                                                             agaTTACCGCCAGTTCCAGCACGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAAACCGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatatgccatc                                                                                                                                     >  2:165367‑M1/1‑147 (MQ=255)                                                                                     gCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGAGCATGGAAGGGTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcatt                                                                                                                             <  2:551989‑M1/251‑113 (MQ=255)                                                                                      ccAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattc                                                                                                                            <  2:88597‑M1/251‑114 (MQ=255)                                                                                        aGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagctcattctt                                                                                                                          <  2:8653‑M1/251‑116 (MQ=255)                                                                                               gCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattatt                                                                                                                    <  2:164821‑M1/250‑122 (MQ=255)                                                                                                          cccGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaa                                                                                                        <  2:124554‑M1/251‑134 (MQ=255)                                                                                                           ccGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCTCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattagcttgttcgatgttgttggtgattgtcagggatagtaaatcgcgttactcgtttcatagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaag                                                                                                       <  1:274283‑M1/251‑135 (MQ=255)                                                                                                                  cAGGGGCGCATTGAAGGTGTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttagtatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcgtttcagagcatgttttcatccctgaatatgtgccatcagcgcattcttattattgtaataacacaagcgttct                                                                                                 <  2:535951‑M1/250‑141 (MQ=255)                                                                                                                   aGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcact                                                                                               <  1:154340‑M1/251‑143 (MQ=255)                                                                                                                      ggCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCAATGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcactttt                                                                                            <  2:52158‑M1/251‑146 (MQ=255)                                                                                                                           atcgaagGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcactttttgtg                                                                                        >  2:369224‑M1/4‑101 (MQ=255)                                                                                                                            tGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtga                                                                                       >  2:468876‑M1/1‑100 (MQ=255)                                                                                                                             ggAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgaa                                                                                      <  2:433068‑M1/250‑152 (MQ=255)                                                                                                                                  gTTTTGCTCGCATAACCATACCCAAGCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgaaatttta                                                                                <  2:20753‑M1/251‑158 (MQ=255)                                                                                                                                   ttttGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgaaattttat                                                                               >  1:378222‑M1/1‑93 (MQ=255)                                                                                                                                     ttGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaagaacacaagcgttcacttgtggtgaaattttatc                                                                              <  2:233951‑M1/250‑160 (MQ=255)                                                                                                                                                    tACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgaaattttatcatcactaataatacct                                                              >  2:101707‑M1/1‑76 (MQ=255)                                                                                                                                                       ccAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgaaattttatcatcactaataatacctacc                                                           <  1:101707‑M1/251‑179 (MQ=255)                                                                                                                                                          aTCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagaagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgaaattttatcatcactaataatacctacccct                                                        <  1:473125‑M1/251‑182 (MQ=255)                                                                                                                                                           ccaACCCAACTCGGATGTTGGCGCTCATGTCATGGCATCTCATTGAAGTATGATGGCTATTTGACTCTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgaaattttatcatcactaataatacctacccctt                                                       <  2:115145‑M1/250‑183 (MQ=255)                                                                                                                                                             aaCCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgaaattttatcatcactaataatacctacccctttg                                                     <  1:197181‑M1/251‑185 (MQ=255)                                                                                                                                                                  aaCACGCATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgacattttatcatcactaataatacctacccctttggtatt                                                >  2:98438‑M1/1‑62 (MQ=255)                                                                                                                                                                       ggATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagtgatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgaaattttatcatcactaataatacctaccccgttggtattaatta                                           <  1:413689‑M1/251‑195 (MQ=255)                                                                                                                                                                       ggATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgaaattttatcatcactaataatacctacccctttggtattaatta                                           <  1:387125‑M1/251‑195 (MQ=255)                                                                                                                                                                                      tGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgaaattttatcatcactaataatacctacccctttggtattatttattttctggacctttt                            >  2:253548‑M1/1‑42 (MQ=255)                                                                                                                                                                                                         aGTATGATGGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcatcgcattcttattattgtaataacacaagcgttcacttttggtgaaattttatcatcactaataatacctacccctttggtattaattattttatggaccttttatgacttttcaggactact         <  1:333632‑M1/251‑229 (MQ=255)                                                                                                                                                                                                         aGTATGATGGCTATTTGACACTAaaccaggaatgtattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcttccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgaaattttatcatcactaataatacctacccctttggtattaattatgttatggaccttttatgactgttcaggactact         <  2:580742‑M1/251‑229 (MQ=255)                                                                                                                                                                                                               atgGCTATTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattattgtaataacacaagcgttcacttttggtgaaattttatcatcactaataatacctacccctttggtattaattattttatggaccttttatgactgttcaggactacttatta    >  1:286880‑M1/1‑17 (MQ=255)                                                                                                                                                                                                                 ggCTAGTTGACACTAaaccaggaatttattatcttgttcgatgttgttggtgattgtcagggatagtaaagcgcgttactcttttcagagcagtttttcatccctgaatatttgccatcagcgcattcttattaatgtaataacacaagcgttcacgtttggtgaaattttatcatcactaataatacctacccctttggtattaattattttatggaccttttatgactgttcaggactacttattaaa  <  2:329760‑M1/250‑236 (MQ=255)                                                                                                                                                                                                                               |                                                                                                                                                                                                                                            TTAAACAGATGCTTCGGCTCAGAGACAACCGTAACCGTTGGCCAGTCGGCTTTTACTTTTGTTTCATCACTGCTGGAGATTACCGCCAGTTCCTGCCCGGGCGTGCCCGCAATCAGGGGCGCATGGAAGGTTTTGCTCGCATAACCATACCCAATCAACCCAACACGGATGTTGTCGCTCATGTCATTGCCTCTCATTGAAGTATGATGGCTATTTGACACTATCCTTTACCCACGCTCAACAGTTTAATAACCTGCCAGCAATAAGGGATGTTGTTTAACTTAAGTCAAAAAAATAGCGAATTTTCCAACGACAAAAGCTAAATATCGCAAAAACCTCAGTAAAAATCTTGCTGGAGCTATTATTGCTAAGTAACATTTACCCCCTGAAGTTAATGGATCAATCAAGAGAGATGTGGGCTGTAATGAATCGTCTTATTGAATTAACAGGTTGGATCG  >  NC_000913/1704127‑1704584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑