New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1084696	54 (1.070)	4 (0.080)	3/452	3.3	7.7%	intergenic (+49/‑296)	efeB/phoH	heme‑containing peroxidase/deferrochelatase/ATP‑binding protein PhoH
	?	NC_000913	= 3392145	46 (0.970)					intergenic (‑117/+313)	tldD/yhdP	metalloprotease subunit TldD/phospholipid transport factor YhdP
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGATATGGGGTTGCTGTTTGTCTGCTACCAACACGATCTGGAAAAAGGCTTCCTGACAGTACAAAAAAGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAATATAAGTAAATATATTGTTGCAATAAATGCGAGATCTGTTGTACTTATTA  >  NC_000913/1084461‑1084939                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                       ggATATGGGGTTGCTGTTTGTCTGCTACCAACACGATCTGGAAAAAGGCTTCCTGACAGTACAAAAAAGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGGACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTTCGC‑AGATTCCTGATGCGACGCTTTCGCGTCTT‑Ataat                                                                                                                                                                                                                                        >  1:130610/1‑248 (MQ=255)       ggggTTGCTGTTTGTCTGCTACCAACACGATCTGGAAAAAGGCTTCCTGACAGTACAAAAAAGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTT‑GCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACa                                                                                                                                                                                                                                 <  1:176434/251‑1 (MQ=255)            tGCTGTTTGTCTGCTACCAACACGATCTGGAAAAAGGCTTCCTGACAGTACAAAAAAGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCCGCCGGGGGGGGAGGACGCGGAAGAATATTTCGGGATCGCGTTATTGCGGGTTTAATGTTTTTTGGCGGGTAAAGCATTTTTTCGC‑CGATGCCTGAAGCGACGCTTTCGCGtatttatataccgacaata                                                                                                                                                                                                                               >  2:474337/1‑232 (MQ=255)                   tGTCTGCTACCAACACGATCTGGAAAAAGGATTTCTGACAGTACAAAAAAGGCTCAAGGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCgg                                                                                                                                                                                                                       <  1:2602/250‑1 (MQ=255)                       cgccaCCAACACGATCTGGAAAAAGGTTTTCTTACAGTACAAAAAAGGCTCAATGGGGATGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTg                                                                                                                                                                                                                  <  2:304886/247‑1 (MQ=255)                                 acGAACTGGAAAAAGGCTTCCTGACAGTACAAAAAAGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGa                                                                                                                                                                                                        <  1:440386/251‑1 (MQ=255)                                                   tCCTGACAGTACAAAAAAGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGGAGGAAGCGAACGGTTATTTCGGAAGCGCGTTATTGCGGGGTTAATGTTTTTTGGCGGATAAGGCCTTTGTGGGCCAG‑TGGCTGTTGGGACGCTTGCGGCTCTT‑ATCATGCCTACAAACCGTGCGGGGTTGGGAGGTTGGGTAAGGCGtttcagccgc                                                                                                                                                                                       >  2:207524/1‑242 (MQ=255)                                                    ccTGACAGTACAAAAAAGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAACCCTATCGGCGGCGGTTCTTTTTTTGCGCTGCCGGGGGGGAAGGCCGCGAACGCTTATTTCGGGAGCGCGTTGTTGCGGGTTTAATGTTTTTAGGCGGGTAAGGCATTTGTGCGC‑AGATGCCTGATGCGGCCCTTGCGCGTCTT‑ATCATGCCt                                                                                                                                                                                                                                    >  1:494021/1‑204 (MQ=255)                                                    ccTGACAGGACAAAAAAGGCTCAATTGCTAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTAGTTCGGAAGCGCGTTATGGCGGGTGTAATGTGTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCt                                                                                                                                                                                                                                    <  2:494021/204‑1 (MQ=255)                                                         cAGTACAAAAAAGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGATTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGAGCGGGGTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGc                                                                                                                                                                                >  1:427690/1‑251 (MQ=255)                                                           gtaaaaaaaagtgactaTGGTGAAGCGCTGGATGAATACGTTAAACCTATCGGCGGCGGTTATTTTTGTGGGCTGCCGGGGGTGAAGGACGTGAACGATTATTTCGGAAGTGTGTTATTTCTGGTTTAATGTTTTTAGGCGTATAAGGCATTTGTGCGG‑ATATGCCTGATGCGACGCTGTCGCGTCTT‑ATCATGCCGACAATCAGTGTGGGTATGGTATTCTGGATAGGGCGTTCACGCCGCATTCggtg                                                                                                                                                                               <  2:369621/234‑3 (MQ=255)                                                                  aaaGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGGGAAGGAAGCGAACGGTTATTTCGGAAGCGCGTTATTGGGGGGTTAATGTTTTTTGGGGGATAAGGCATTTGTGCGC‑AGATGGCTTGTGCGACGCTTGCGCGGCTT‑ATCATGCCTTCAATCAGTGCGGGTTTTGTAGGGTGGGTAAGGCGTTCACGCCGCAACCGGCGGTCGTgtc                                                                                                                                                                       >  2:536796/1‑249 (MQ=255)                                                                    aGGCTCAATGGCGAAGCGCTGGAGGAATTCGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGTTGGTTAAGGCGGTCACGCCGCATCCGGCGATCGTGCAct                                                                                                                                                                     <  1:476913/251‑1 (MQ=255)                                                                    aGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCAct                                                                                                                                                                     <  1:207524/251‑1 (MQ=255)                                                                      gCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActga                                                                                                                                                                   <  1:536796/251‑1 (MQ=255)                                                                                          aggaATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGGCGGGGGTGAAGGGCGCGAACGGTTATTTCGGGAGCGCGGTATTGCGGGGTTAATGGTTTTAGGCGGATAAGGCATTTGTGCTC‑AGAGTCCTGAGTCGACGCTTGCGCGTCTTTACCA‑GCCTACCATCAGGGCGGGTTTGGGAGGCTGGGTAAGGCGGTCCCGCCGCATTCGGCGAACGGTCCCTGATGGCTGAGTGCAA‑TCctgct                                                                                                                                              >  2:515858/1‑251 (MQ=255)                                                                                              aTACGTTAAACCTATCGGCGGCGGTTATTTTTTTTCGCTGCCGGGGGTGAAGGGCGCGGACGGTTATTTTGGGAGCGGGTTCTTGCGGGGTTAATGTTTTTAGGCGGGTAAAGCATTTATCCGC‑CGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGGTAAGGCGTTCCCGCCCCATCCGGCGATCGTGCACTGATGCCTAG‑TGCAAATCCTGCTGaa                                                                                                                                           >  1:539089/1‑250 (MQ=255)                                                                                                 cGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGc                                                                                                                                        >  1:171298/1‑250 (MQ=255)                                                                                                           agcggcggcggTTATTTTTTTGCGCGGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCtttt                                                                                                                             <  1:554532/249‑1 (MQ=255)                                                                                                                        aTTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGtc                                                                                                                 <  1:430469/250‑1 (MQ=255)                                                                                                                           gttttGCGCTGCTGTGGGTGATGGACTCGATCGTTTAGTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGGCTGATGCTACGCTGGCGCGTATT‑ATCATGCCTCCAATCAGTGCTGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAACCCTGCTGAAAGCACACAGCTTTTTTCATCACTGtcatc                                                                                                              <  2:425230/249‑1 (MQ=255)                                                                                                                              ttGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCTTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGCCGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGTTTTGGTAGGCTGGATAAGGCGt                                                                                                                                                                                                <  2:401705/166‑1 (MQ=255)                                                                                                                              ttGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGt                                                                                                                                                                                                >  1:401705/1‑166 (MQ=255)                                                                                                                                 cgcTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGCTCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGt                                                                                                       >  1:570946/1‑251 (MQ=255)                                                                                                                                      ccGGGGGTGAAGGCCGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCt                                                                                                  >  1:123536/1‑251 (MQ=255)                                                                                                                                          gggTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTcc                                                                                              >  1:266162/1‑251 (MQ=255)                                                                                                                                           ggTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTtc                                                                                                                          >  1:151905/1‑222 (MQ=255)                                                                                                                                             tGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATA‑GGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGt                                                                                           >  1:400622/1‑250 (MQ=255)                                                                                                                                               aaGGACGCGAACGATTAGTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTTATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAg                                                                                         <  2:135195/251‑1 (MQ=255)                                                                                                                                                aGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAATGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGAAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGt                                                                                           >  2:192513/1‑248 (MQ=255)                                                                                                                                                        aaCGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATg                                                                                >  1:405890/1‑251 (MQ=255)                                                                                                                                                         aCGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAAGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCAAGTAGAAACTAATGt                                                                               >  1:344251/1‑251 (MQ=255)                                                                                                                                                              tattTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACAAAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑Tg                                                                         >  2:211289/1‑251 (MQ=255)                                                                                                                                                                    ggAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATgg                                                                   >  1:181238/1‑251 (MQ=255)                                                                                                                                                                            gTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTTCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTACTGTCAC‑TGAAATGGTGTTTtat                                                           >  1:463481/1‑251 (MQ=255)                                                                                                                                                                                 tGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCCCTCTGTCATCtt                                                                                                 >  2:117797/1‑209 (MQ=255)                                                                                                                                                                                 tGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCtt                                                                                                 <  1:117797/209‑1 (MQ=255)                                                                                                                                                                                  gCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTa                                                      <  1:501490/250‑1 (MQ=255)                                                                                                                                                                                    gggTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAat                                                   >  1:568279/1‑251 (MQ=255)                                                                                                                                                                                      gTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCGTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAatat                                                 <  1:491060/251‑1 (MQ=255)                                                                                                                                                                                          aaTGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGCTAAGGCGTTCACTCCGCATCCGGCGATCGTGCACTGCTGCCTGA‑TGCAAATCCTTCTGAAAGCCCACAGCTTTTTTCCTCACTGTCATCACTCTGTCATCTTTCCAGTAAAAACTAATGTCAC‑TGACATGGTGTTTTGTATTTAAATATAAGt                                             >  2:453667/1‑251 (MQ=255)                                                                                                                                                                                           aTGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAATATAAGTa                                            <  1:463134/251‑1 (MQ=255)                                                                                                                                                                                              gttttAGGCGGATAAGGTATTTGTGCGC‑AGAAGCCTTATGCGACTCCTGCGCGTCGT‑AACATGCATACAAACAGTGCGGGTTTGGTAGGCTGGATAAGGAGTTCACGCCGCATCCGGCGATCGTGCTCTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAATATAAGTaaa                                          <  2:310750/249‑1 (MQ=255)                                                                                                                                                                                                   aGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAATATAAGTAAATATAtt                                    >  2:474915/1‑251 (MQ=255)                                                                                                                                                                                                         aTAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ACTATGCCTTCAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAATTCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAATATAAGTAAATATATTGTTGCa                              <  1:101703/251‑1 (MQ=255)                                                                                                                                                                                                            aGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAATATAAGTAAATATATTGTTGCAAt                            >  1:100812/1‑250 (MQ=255)                                                                                                                                                                                                              gCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTa                                                      <  1:460552/222‑1 (MQ=255)                                                                                                                                                                                                              gCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGT‑ACATGAAATGGTGTTTTATTGTTa                                                      >  2:460552/1‑222 (MQ=255)                                                                                                                                                                                                               cATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGCTAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAATATAAGTAAATATATTGTTGCAATAAAt                        >  1:44887/1‑251 (MQ=255)                                                                                                                                                                                                                aTTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAATATAAGTAAATATATTGTTGCAATAAATg                       >  1:241560/1‑251 (MQ=255)                                                                                                                                                                                                                    gtgCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAATATAAGTAAATATATTGTTGCAATAAATGCga                    <  1:474915/250‑1 (MQ=255)                                                                                                                                                                                                                        gc‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAATATAAGTAATTATATTGTTGAAATAAATGCGAGATCt               >  2:380174/1‑251 (MQ=255)                                                                                                                                                                                                                                    aTGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAATATAAGTAAATATATTGTTGCAATAAATGCGAGATCTGTTGTACttat    >  1:363276/1‑251 (MQ=255)                                                                                                                                                                                                                                        gACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAATATAAGTAAATATATTGTTGCAATAAATGCGAGATCTGTTGTATttatta  >  2:219390/1‑249 (MQ=255)                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                       GGATATGGGGTTGCTGTTTGTCTGCTACCAACACGATCTGGAAAAAGGCTTCCTGACAGTACAAAAAAGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAATGTTTTTAGGCGGATAAGGCATTTGTGCGC‑AGATGCCTGATGCGACGCTTGCGCGTCTT‑ATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGA‑TGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAC‑TGAAATGGTGTTTTATAGTTAAATATAAGTAAATATATTGTTGCAATAAATGCGAGATCTGTTGTACTTATTA  >  NC_000913/1084461‑1084939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.