New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1979270	NA (NA)	72 (1.190)	65/482	0.1	98.6%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 4569764	1 (0.020)					intergenic (‑1037/+398)	ytiE/yjiR	protein YtiE/fused putative DNA‑binding transcriptional regulator/putative aminotransferase YjiR

GTCGCCCTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATATATAAAAGGGGAGCAGCGCATTCTTCGATTGTTGTTGCAGAATGGGGCGGATCCTGAATGGATACAAAAGATTACCGGACTTTCGGCAGAGCAAATGCAGGCATTAAGGCAGCCCTTGCCTGAGCGTGAGCGCTATTCATGGCTCAAGAGCTAATCAGAGACGGATGACAAACGCAAAGCAGCCTGATGCGCTATGCTTATCAGGTCTACATAACCCATTAAATATATTGAACTTTAAAGATT  >  NC_000913/4569517‑4570007                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                    gTCGCCCTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGatatat                                                                                                                                                                                                                                                  <  1:411564/251‑1 (MQ=255) gTCGCCCTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggg                                                                                                                                                                                                                                                  <  1:239350‑M2/251‑4 (MQ=255)    gCCCTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgat                                                                                                                                                                                                                                               <  1:410438‑M2/251‑7 (MQ=255)         ggtggAGTTTATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCTACTGGTAGTATTACTGGTTACAGATTGTGCTAATGACAGCCAGATAACTGCGCTGTGAAATTTCATTTTACTGACTGGCGATGAAGCGAGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCTAATTCATAATGATGGAGAggtgatgcg                                                                                                                                                                                                                                            >  2:575104‑M2/3‑240 (MQ=255)          ttggcgctgatccaaACGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTTAACTTCCCCGTCGAATGCCACAACACAGGGAGCGAATACTGACGATTGCAGAGCGAATTCATAGTGATGGATAggtgatgctgcc                                                                                                                                                                                                                                         <  2:659277‑M2/244‑13 (MQ=255)               gTTGATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaactt                                                                                                                                                                                                                                    >  1:508562‑M2/1‑234 (MQ=255)                      caaaagcagcgtcgccagcgctaTCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACATCCAGATAACGGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGGTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCAAAACACAGTGAGCGAATAATGACGATTGCAGAGCGAAGTCATAATGATGGATAggtgatgctgccaccttactgatt                                                                                                                                                                                                                             >  2:449002‑M2/12‑227 (MQ=255)                      cAAAATCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatt                                                                                                                                                                                                                             >  1:290614‑M2/1‑227 (MQ=255)                                    ccAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggt                                                                                                                                                                                                               >  1:675735‑M2/1‑213 (MQ=255)                                        agcgaTCTGTGGGGGCTTATCGATCAACTGGTAGTAGTTCGGGGTACTGAGTGGTCTAATGACAGCCATATAACTGCGCTGTGAAATTACAGTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACATACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACTATTGCAGAGCGAAGGCATAATGATGGATAggtgatgctgccaaattactgatttagtgtaggatggtgtt                                                                                                                                                                                                            >  2:247857‑M2/2‑209 (MQ=255)                                                   ggggCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc                                                                                                                                                                                                >  1:569014‑M2/1‑198 (MQ=255)                                                    gggTTTAACGATCAACTGGTAGTAGTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGGTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaactgacggatttagtgtaggatggtgttcttgaggtgctcc                                                                                                                                                                                               >  2:58229‑M2/1‑197 (MQ=255)                                                        ttATCGATCAAATGGTAGTATTACTGGTTACAGAGTGTGCTACTGACCGCGAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGAAGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtg                                                                                                                                                                                           <  1:523152‑M2/251‑59 (MQ=255)                                                                cAACTGGTAGTATTACTGGTGACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGAGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcgtctgt                                                                                                                                                                                   >  2:148593‑M2/1‑185 (MQ=255)                                                                     ggTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc                                                                                                                                                                                >  1:466207‑M2/1‑180 (MQ=255)                                                                     ggTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc                                                                                                                                                                                >  1:324038‑M2/1‑180 (MQ=255)                                                                       tagtaTTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                                                                                                                                                                            <  2:160462‑M2/251‑74 (MQ=255)                                                                             tACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgacaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg                                                                                                                                                                       >  1:22616‑M2/1‑172 (MQ=255)                                                                                 ggTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct                                                                                                                                                                  <  1:255548‑M2/251‑84 (MQ=255)                                                                                     aCAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcgtctgtttctatcagctgtccctcctg                                                                                                                                                              >  2:113606‑M2/1‑164 (MQ=255)                                                                                        gagTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgat                                                                                                                                                                                                                  <  1:65538‑M2/196‑36 (MQ=255)                                                                                        gagTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGGTTTAATGAGTTTATCAGTGAACTGACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGAGAggggatgctgccaacgtactgatttagtgtatgat                                                                                                                                                                                                                  >  2:65538‑M2/1‑161 (MQ=255)                                                                                              gCTAATGACAGCCAGATCACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGACTTCATAATGATGGATAggtgatgctgccaacttactgatttagtgaatgatggtgtttttgaggtgctccagtggcttctgtttctatcagattgccctcctgttcagctac                                                                                                                                                     <  2:584946‑M2/251‑97 (MQ=255)                                                                                                 aaTGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATTAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgttcttgaggtgctccagaggcttctgtttctatcagctgtccctcctgttcagctacta                                                                                                                                                   >  2:81719‑M2/1‑152 (MQ=255)                                                                                                  aTGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgac                                                                                                                                                 >  1:400266‑M2/1‑151 (MQ=255)                                                                                                     aCAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggg                                                                                                                                              >  1:160462‑M2/1‑148 (MQ=255)                                                                                                           aGATAACTGCTCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg                                                                                                                                        >  1:523793‑M2/1‑142 (MQ=255)                                                                                                           aGATAACTGCGCTGTTAAATTACATTTTACTGACTGGAGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg                                                                                                                                        <  1:181036‑M2/251‑110 (MQ=255)                                                                                                                        gTTAAATTACCTTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGTCGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgtggtgctccagtggctt                                                                                                                                                                                       <  2:290307‑M2/191‑63 (MQ=255)                                                                                                                        gTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgattctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                                                                                                                       >  1:290307‑M2/1‑129 (MQ=255)                                                                                                                        gTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaa                                                                                                                            <  1:345869‑M2/250‑122 (MQ=255)                                                                                                                         ttAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacagcaaa                                                                                                                            <  2:441626‑M2/249‑122 (MQ=255)                                                                                                                             aTTACATTTTACTGCCTGGCGATGAAGCGCGTTTTAATGATTTGATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcacc                                                                                                                      >  2:527520‑M2/1‑124 (MQ=255)                                                                                                                             aTTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaact                                                                                                                                                                                                                                     >  1:122127‑M2/1‑124 (MQ=255)                                                                                                                             aTTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaact                                                                                                                                                                                                                                     <  2:122127‑M2/140‑17 (MQ=255)                                                                                                                              ttACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgctaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgaaggggtggtgcgtaacggcaaaagcaccg                                                                                                                     <  1:571705‑M2/251‑129 (MQ=255)                                                                                                                                    tttACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                                                                                                                                                                          >  2:155882‑M2/1‑117 (MQ=255)                                                                                                                                    tttACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                                                                                                                                                                          <  1:155882‑M2/160‑44 (MQ=255)                                                                                                                                    tttACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGAGTGCAGAGCGAATTCATAATGATGGATAggtgatgcggccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgga                                                                                                                >  1:584946‑M2/1‑117 (MQ=255)                                                                                                                                      tACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTCTCAGTGAACTTACCCGTCGAATGACACAACAAAGGGAGCGAATCATGACGATTGCAGAGAGAATTAATACTGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttatgaggtgctccagtggcttctgtttctataagctgtccctcctgttcagctactgccggggtggtgcgtaacggcaaaatcaccgccggacct                                                                                                             <  2:379196‑M2/251‑137 (MQ=255)                                                                                                                                      tACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggaca                                                                                                              >  1:446185‑M2/1‑115 (MQ=255)                                                                                                                                      tACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTAGCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggaca                                                                                                              >  1:17264‑M2/1‑115 (MQ=255)                                                                                                                                          gattggcgATGAAGCGCGTTTTAATGAGGTTAACAGTGAACTTACCCGTCGAATGCAACAACACAGGGAACGAATAATGACGATTGCAGAGCGAATTCATAATGATGTATAggtgatgctgccaacttactgatttagtgtatgttggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatca                                                                                                           >  2:239350‑M2/4‑111 (MQ=255)                                                                                                                                          gactgGCAAAGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGCCGACTGCCACAACACAGGGTGCGAATAATGACGATTGAAGAGCGAATTCATAATGACGGATAggtgctgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggccaaagcaccgccggacatccgc                                                                                                         <  2:39732‑M2/251‑141 (MQ=255)                                                                                                                                              ggCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgct                                                                                                      >  1:676534‑M2/1‑107 (MQ=255)                                                                                                                                                cGATGAAGCGCGTCTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatc                                                                                                   <  1:290144‑M2/251‑147 (MQ=255)                                                                                                                                                 gATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatct                                                                                                  <  1:519226‑M2/251‑148 (MQ=255)                                                                                                                                                          cgTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgattctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctc                                                                                          <  2:195631‑M2/250‑156 (MQ=255)                                                                                                                                                           gTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCAAAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcac                                                                                        <  1:520671‑M2/251‑158 (MQ=255)                                                                                                                                                             tttAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagcggtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcact                                                                                       >  1:316716‑M2/1‑92 (MQ=255)                                                                                                                                                               tAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgcc                                                                                    <  1:126970‑M2/251‑162 (MQ=255)                                                                                                                                                                    aGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaa                                                                                <  1:478458‑M2/250‑166 (MQ=255)                                                                                                                                                                       gtaTCAGTTAACTTTCCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctggccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaac                                                                             >  2:345869‑M2/2‑82 (MQ=255)                                                                                                                                                                             gTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggagatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcgctcctgttcagctactgacggggtggtgcgtaacggcaatagcaccgccggacaacagcgctatctctgctctcactgccgtaaaacatggca                                                                       <  2:192488‑M2/250‑175 (MQ=255)                                                                                                                                                                              tGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaac                                                                     <  2:653912‑M2/251‑177 (MQ=255)                                                                                                                                                                               gAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaact                                                                    <  1:662318‑M2/251‑178 (MQ=255)                                                                                                                                                                                   ttACCCGTCGCATGCCACAACACAGGGCGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgttttt                                                                                                                                                                                                         <  1:572213‑M2/114‑45 (MQ=255)                                                                                                                                                                                   ttACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgttttt                                                                                                                                                                                                         >  2:572213‑M2/1‑70 (MQ=255)                                                                                                                                                                                                   acaacaCAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgctt                                                >  1:601265‑M2/1‑54 (MQ=255)                                                                                                                                                                                                       cacaGGGAGCGAATAATGACGATGGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctctcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctc                                             <  1:527405‑M2/250‑201 (MQ=255)                                                                                                                                                                                                           gggAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatcgctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaaccc                                        >  1:651538‑M2/1‑46 (MQ=255)                                                                                                                                                                                                                 gAATAATGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagccccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacg                                  >  1:195631‑M2/1‑40 (MQ=255)                                                                                                                                                                                                                  aataatGACGATTGCAGAGCGAATTCATAATGATGGCTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttaacttacaccgcttctcaacccggtacgc                                 <  2:177190‑M2/251‑213 (MQ=255)                                                                                                                                                                                                                   ataatGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcc                                <  1:295164‑M2/251‑214 (MQ=255)                                                                                                                                                                                                                   ataatGACGATTGCAGAGCGAATTCATAATGATGGATAggtgaggctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctttccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacagcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgca                                >  1:379196‑M2/1‑38 (MQ=255)                                                                                                                                                                                                                    taatGACGATTGCAGAGAGAATTCATAATGATGGATAggtgattctgccaacttactgatttagtgtctgatggtgtttttgaggtgctccagtggcttctgtttctatcagctggccctcctgatcagctactgacggggtggtgcgtaactgcacacgcaccgcctgacatcagcgctctatgtgctctcactgccgtaaaacatggcaactgcagttcccttacaccgcttctcaacccgggacgcac                               <  2:68619‑M2/251‑215 (MQ=255)                                                                                                                                                                                                                       tGACGATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcacc                              <  1:644269‑M2/249‑216 (MQ=255)                                                                                                                                                                                                                           gATTGCAGAGCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacacggtacgcaccagaaa                         <  1:90037‑M2/250‑221 (MQ=255)                                                                                                                                                                                                                                   agCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatccgctgtccctcctgttcagctactgacggggtggtgcgta                                                                                                                                    <  1:41559‑M2/135‑114 (MQ=255)                                                                                                                                                                                                                                   agCGAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctacggacggggtggtgcgta                                                                                                                                    >  2:41559‑M2/1‑22 (MQ=255)                                                                                                                                                                                                                                      gAATTCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatg             <  1:37676‑M2/251‑233 (MQ=255)                                                                                                                                                                                                                                         ttCATAATGATGGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggcc          <  1:448837‑M2/251‑236 (MQ=255)                                                                                                                                                                                                                                                 gatgGATAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatgaatgg  >  1:18672‑M2/1‑8 (MQ=255)                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                    GTCGCCCTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATATATAAAAGGGGAGCAGCGCATTCTTCGATTGTTGTTGCAGAATGGGGCGGATCCTGAATGGATACAAAAGATTACCGGACTTTCGGCAGAGCAAATGCAGGCATTAAGGCAGCCCTTGCCTGAGCGTGAGCGCTATTCATGGCTCAAGAGCTAATCAGAGACGGATGACAAACGCAAAGCAGCCTGATGCGCTATGCTTATCAGGTCTACATAACCCATTAAATATATTGAACTTTAAAGATT  >  NC_000913/4569517‑4570007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.