| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 20,703 | +GCAAGAACCTGCAA | intergenic (‑195/+112) | insA1 ← / ← rpsT | IS1 family protein InsA/30S ribosomal subunit protein S20 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 20703 | 1 (0.020) | 24 (0.420) +GCAAGAACCTGCAA |
18/454 | 1.6 | 96.2% | intergenic (‑195/+112) | insA1/rpsT | IS1 family protein InsA/30S ribosomal subunit protein S20 |
| ? | NC_000913 | 20704 = | 1 (0.020) | intergenic (‑196/+111) | insA1/rpsT | IS1 family protein InsA/30S ribosomal subunit protein S20 | |||||
CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATG > NC_000913/20527‑20930 | aaaatagagtggtcttaagtttaatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCtt > 1:664311‑M2/178‑251 (MQ=255) agagtggtcttaagtttaatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGcgcg > 1:271648‑M2/173‑251 (MQ=255) agtttaatacctcaatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTcac > 1:415251‑M2/161‑250 (MQ=255) caatgtgtatcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCa > 1:574294‑M2/149‑250 (MQ=255) aatgtgtatcacaatatccacattctttgtagggggtctggagattgggtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagcaacgaagagttcaggtagtacaacggcatgtctgcaagaacctgacaCTTTTGACTATCTGGCAACCGGCCGTGTGTTCTCTCACGCCTCACAAAAGCAGCAAGCATAAAAAAA‑CCCGCCTGTGCGGGCTTTTTAACAAAACTTCAGCaa > 1:622012‑M2/148‑250 (MQ=255) gtttatcacaagttccacattctttgtagggggtctggagtttgagtagatatgcttggtcagaatttatcagtcgatggttctacgattcttaagccacgaagagtgcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTAGCTGGCAACCGGCAGTGTGTGTTCTCACGCATCACAAAAGCAGCATGCATAATAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAaatgg < 2:395898‑M2/107‑3 (MQ=255) tcacaatatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGAt > 1:425040‑M2/140‑251 (MQ=255) tatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATaaaaa < 2:525547‑M2/65‑1 (MQ=255) tatccacattctttgtagggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATaaaaa > 1:525547‑M2/134‑198 (MQ=255) ggggtctggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCa < 1:399083‑M2/17‑1 (MQ=255) ggggtctggagattgagtagatattcttggtcagaatgtctcagccgatggatctacgattcttaagccacgaagagttcagatagtacaacggcatggctgcaagaacctgcaaCTTTTGACTATCTGGCa > 2:399083‑M2/116‑132 (MQ=255) cTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAAACCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTc > 1:228912/1‑250 (MQ=255) tggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCt > 1:296838‑M2/110‑192 (MQ=255) tggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCt < 2:296838‑M2/83‑1 (MQ=255) tggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAgg > 1:279774‑M2/110‑251 (MQ=255) ggagattgagtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGt > 1:380824‑M2/109‑251 (MQ=255) gtagatattcttgttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTAt < 1:29387‑M2/152‑1 (MQ=255) agatattcttgttcagaatgtatcagccgatggttctccgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGTCAACCGGCAGAGTGTTCTCTCACGCATCACAAAAGAAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAACCAGTTTAGTGATCTGTGCAGTCAGGTTAGCCTTATg > 1:550757‑M2/98‑250 (MQ=255) gttcagaatgtatcagccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCtt < 1:652769‑M2/164‑1 (MQ=255) agccgatggttctacgattcttaagccacgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGAGTGTTCTCTCACGCATCCCAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGt > 1:424275‑M2/74‑216 (MQ=255) acgaagagttcagatagtacaacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGGGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCATCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACg < 2:664311‑M2/205‑1 (MQ=255) aagtgttcaaatagttcatcgtcatgtcttcaagaacacgcaaCTTTTGACTATCGTGCAACCGGCAGTGGGTTCTCTTACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTGTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTTTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGCCCTTTAGCAGCCTGACGGTCCTCGATc < 2:453913‑M2/208‑1 (MQ=255) agagttcagatagtacaacggcatgtctgcaagaccctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCg < 1:268511‑M2/209‑1 (MQ=255) aacggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTaaa < 1:323731‑M2/225‑1 (MQ=255) cggcatgtctgcaagaacctgcaaCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGCTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGGTCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCGTTTCGTTAAATg > 2:269916‑M2/25‑251 (MQ=255) | CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACCTCAATGTGTATCACAATATCCATATTCTTTGTGGGGGAGTCTGGAGATTGAGTAGATATTCTTGTTCAGAATGTATCAGCCGATGGTTCTACGATTCTTAAGCCACGAAGAGTTCAGATAGTACAACGGCATGTCTCTTTTGACTATCTGGCAACCGGCAGTGTGTTCTCTCACGCATCACAAAAGCAGCAGGCATAAAAAAA‑CCCGCTTGCGCGGGCTTTTTCACAAAGCTTCAGCAAATTGGCGATTAAGCCAGTTTGTTGATCTGTGCAGTCAGGTTAGCCTTATGACGTGCAGCTTTGTTTTTGTGGATCAGACCTTTAGCAGCCTGACGGTCCACGATCGGTTGCATTTCGTTAAATG > NC_000913/20527‑20930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |