Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,291,151	IS5 (–) +4 bp	coding (910‑913/1014 nt)	rssB →	regulator of RpoS

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1291151 =	0 (0.000)	55 (0.910)	48/482	0.3	100%	coding (910/1014 nt)	rssB	regulator of RpoS
	?	NC_000913	= 2290113	NA (NA)					noncoding (1/1195 nt)	IS5	repeat region
*	?	NC_000913	= 1291154	0 (0.000)	39 (0.650)	31/480	0.8	100%	coding (913/1014 nt)	rssB	regulator of RpoS
	?	NC_000913	2101749 =	NA (NA)					noncoding (1195/1195 nt)	IS5	repeat region

GTATATCAGCACCCCGAAGGGGCTAAGTTCTGAAAAGGAGGCGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1291397‑1291151 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACC  <  NC_000913/2290113‑2289885                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTATATCAGCTCCCCGAAGGGGCTAATTTCGGAAAAGGAGGCGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCTGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAA                                                                                                                                                                                                                                   <  2:555689/251‑1   atattatCACCCCGAAGGTGCTAAGTTCTGAAAATGAGGATATTAATCATAATTAAGCCAATTACTTATACGAATGTCGACGATAGTCCCACCAGCCGAAATTAGCAGGTAATGCAAATTTATCCCGCGTTATCTTTTGCTCATTCTGCAGACATCATCAATCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCCATTGATTCAAATAAGCGTTACCTAAGGAAG                                                                                                                                                                                                                                  <  2:502536/243‑1     ATCAGCACCCCGAAGGGGCTAAGTTCTGAAAAGGAGGCGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGT                                                                                                                                                                                                                                <  1:72347/250‑1       catccCCCCGATGGGGCTAAGTTCTGAAAAGGTGGCGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCG                                                                                                                                                                                                                             <  2:109936/246‑1       CAGCACCCCGAAAGGGCTAAGTTCTGAAAAGGAGGCGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCAGCGCTGGCTCAATTGATTCAAATAAGCGTTACCAAAGGAAGGTGCG                                                                                                                                                                                                                             >  2:525506/1‑251                   GGGGCTAAGTTCTGAAAAGGAGGCGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTG                                                                                                                                                                                                                 <  2:496463/251‑1                        TAAGTTCTGAAAAGGAGGCGGGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTAAGCACGCGTTATCGTTTGCTCATTCTGCAGACAACATCAATCGCAATCGCCCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAAGAAGAGTTCCCTAAGGAAGGAGCGAACAAGACCCTGATATt                                                                                                                                                                                                            >  2:566555/1‑250                        TAAGTTCTGAAAAGGAGGCGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATG                                                                                                                                                                                                            >  1:422007/1‑251                          AGTTCTGAAAAGGAGGCGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATG                                                                                                                                                                                                            >  1:445349/1‑249                                GAAAAGGAGGCGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCCCCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAATCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGTCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCA                                                                                                                                                                                                      <  2:242905/249‑1                                   AAGGAGGCGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTT                                                                                                                                                                                                 <  1:210529/251‑1                                   AAGGAGGCGAGTTAGCATAATTAAAACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGAAATTAGAAGGTAATGCAAATTTAGACCGCGTTATCGTTTGCTCATTCTGCAGACAACATCACGCGAAGTCGACCACCGGTTCCCCATATTTGGCATTTCCAGGCATCGCATCACTGCCTCAATTGTTTCAAATAAGCGTTAACTAAGGCAGGTGCGCCCACGTCCCTGATAgaagatcttgtat                                                                                                                                                                                                 >  2:120652/1‑238                                    aggcGGCGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTG                                                                                                                                                                                                >  1:105982/5‑251                                          CGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCT                                                                                                                                                                                          >  1:161002/1‑251                                          CGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATGCTGCAGACAACAGCAAGCGCAGTCGACCACCGGTTCCCCATATGTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCT                                                                                                                                                                                          <  1:91971/251‑1                                                  CATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTAAAATAAGAGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCAT                                                                                                                                                                                  >  2:643583/1‑251                                                                    TTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACA                                                                                                                                                                            <  1:388321/239‑1                                                                    TTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACA                                                                                                                                                                            >  2:388321/1‑239                                                                          GAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAATTAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTAGAGCCATAGAACAGGGTTCATCATGAGTCAT                                                                                                                                                          >  1:358102/1‑251                                                                                    GATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCT                                                                                                                                                >  1:434986/1‑251                                                                                       AGTACCACCAGCCGACATTAGCAGGTAAGGCAAATTTAGCCCGCGTTATCGGTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTC                                                                                                                                              <  2:182655/250‑1                                                                                                  CCGACATTAGCAGGTAATGCAAATTTAGCCCGTGTTAGCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGAACACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAA                                                                                                                                  <  2:104142/251‑1                                                                                                   CGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATATAACAGGGTTCATCTTGAGTCATCAACT                                                                                                                                                     >  2:383470/1‑231                                                                                                   CGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACT                                                                                                                                                     <  1:383470/231‑1                                                                                                    GACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGAGAATT                                                                                                                                >  1:102910/1‑251                                                                                                     ACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTC                                                                                                                               >  1:102842/1‑251                                                                                                         TAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGC                                                                                                                            <  1:525506/250‑1                                                                                                          AGCAGGTAATGCAAAGTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACAGCAAGCGCAGTCGACCTCCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCA                                                                                                                           <  2:119762/250‑1                                                                                                               GTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGC                                                                                                                     >  1:645632/1‑251                                                                                                               GTAATGCAAATTTAGCCCGCGTTATCGTGTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCTCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGC                                                                                                                     <  1:495591/251‑1                                                                                                                          TTAGCCCGCGTTATCGTTTGCTCATTCTTCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTGCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGAC                                                                                                           <  2:92865/250‑1                                                                                                                          TTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGAC                                                                                                           <  1:316746/250‑1                                                                                                                           atcaCCGCGTTATCGTTTGCGCATTCTGCAGACAACAGCAAGCGCAGTCGACCACCGGGTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTGACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCACGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGGCATCAACGTACCGTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGAC                                                                                                           <  2:448880/245‑1                                                                                                                            AGCCCGCTGTATCTTTTGCTCCTTCTGCAGACAACATCAATCGCAGTCGACCACCGGATCCCCATAGTTGGCATTGCCATGCATCTCATCGCTGGCTCAAGTGATTCAAATAAGCATTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGTAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAG                                                                                                        <  2:70278/251‑1                                                                                                                            AGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAaacacg                                                                                                        >  2:316504/1‑245                                                                                                                            AGCCCGCGTTATCGTTTGATCATTCTGCAGACAACATAAAGAGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGAATCGAATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGACGGTGCGAACAAGGCCCTGATATGAGATCATGTTTGTCATCTGGAGCCCTAGAAACGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGCATTCAGCAGTAAACGCCGTCAGACC                                                                                                          >  2:445491/1‑249                                                                                                                               CCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGAC                                                                                                           >  1:448880/1‑245                                                                                                                                      aaCGTTTGCTCATTCTGCAGACAACATCAAGCGCTGTCGACCTCCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTACGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGAT                                                                                               <  2:74689/248‑1                                                                                                                                                      gaAGACAACCTCAAGCGCAGTCGACCACCGGGTCCCCATATTTTGCATTGCCAAGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCTGTACCTAATGAAGGTGCGAACAAGTCCCTGATATGAGTGCATTTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTGTCTGGGCCCGCAa                                                                                <  2:340126/247‑2                                                                                                                                                        AGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGcg                                                                            >  2:84635/1‑249                                                                                                                                                         GACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGC                                                                           <  1:601394/251‑1                                                                                                                                                           CAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGCTATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCAGCATGGcgc                                                                           >  2:205023/1‑246                                                                                                                                                                  AAGCGCAGTCGACCACAGTTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGC                                                                  <  2:131290/251‑1                                                                                                                                                                              CCACCGGTTCCCCATATTTGGCATTGCAAGGCATCGCATCGCTGGCTCAATTGAGTCAAATAAGCGTTACCTAAGGAAGAAGCGAACAAGTCCCTGAT‑TGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCGTCATGAGTCATCAACTTACCTTCGCCGCCAGTGAAGTCAGCAGTACGCGCCGTCAGACCAGAACAGAGATTTTATTGTCCCGCATGGAGCAGATTCTGCCATGGACAAACAT                                                     >  2:56506/1‑251                                                                                                                                                                                                 GGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAATGTGCGAACAAGTTCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGGGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGC                                    <  2:296594/250‑1                                                                                                                                                                                                    ATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTT                                >  1:625035/1‑251                                                                                                                                                                                                         CAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACC                           >  1:117337/1‑251                                                                                                                                                                                                         CAGGCATCGCATCGCTGGCTCAATTGATTAAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACC                           <  1:458227/251‑1                                                                                                                                                                                                           GGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCC                         >  1:385830/1‑251                                                                                                                                                                                                              atcgatTCGCTGGCTCAATGGATTCAAAAAAGCTTTACTGAAGGAAGGTGCGAAAATGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACGTACCTCCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCGGCCATGGAAAAACAGGGTGGAAGTCAACGAGCCGTTTTACCCCAAG                      <  2:260886/245‑1                                                                                                                                                                                                              ATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCA                        >  1:405114/1‑249                                                                                                                                                                                                              ATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATCTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCA                        >  1:247795/1‑249                                                                                                                                                                                                                      GCTGGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGCGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGACGTCATCGAGCCGTTTTACCCCAAGGCTGGTA               >  1:215262/1‑250                                                                                                                                                                                                                         GGCTCAATTGATTCAAATAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGG           >  1:373230/1‑251                                                                                                                                                                                                                                  GATTCAAAGAAGCGTTACCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTTTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATTGTAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACC  <  2:184738/251‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTATATCAGCACCCCGAAGGGGCTAAGTTCTGAAAAGGAGGCGAGTTAGCATAATTAAGACAATTACTTATACGAATGGCGACGATAGTACCACCAGCCGACATTAGCAGGTAATGCAAATTTAGCCCGCGTTATCGTTTGCTCATTCTGCAGACAACATCAAGCGCAGTCGACCACCGGTTCCCCATATTTGGCATTGCCAGGCATCGCATCGCTGGCTCAATTGATTCAAATAAGCGTTACCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1291397‑1291151 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACC  <  NC_000913/2290113‑2289885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.