New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4491693	34 (0.940)	3 (0.080)	3/476	3.0	9.6%	coding (833/1320 nt)	idnT	L‑idonate/5‑ketogluconate/gluconate transporter
	?	NC_000913	4492415 =	23 (0.650)					coding (111/1320 nt)	idnT	L‑idonate/5‑ketogluconate/gluconate transporter
Rejected: Frequency below/above cutoff threshold.

ACAAAACCCACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAA‑GTAGCAATCAGCGTAGTGGCGATACGTTGTG‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCGAGGATCATTGCCAGCCCGCCGAGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAGGATAAGAAGCAGCGCGACGCCTGCCGCAATAATGATTAATGGCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGA  >  NC_000913/4492170‑4492658                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                    aCAAAACCCACTTCAAAAAACAGGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAA‑GTAGCAATCAGCGTAGTGGCGATACGTTGTG‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCGAGGATCATTGCCAGCCCGCCGAGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATcc                                                                                                                                                                                                                                                <  2:56748/251‑1 (MQ=255)                        ggCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCACAA‑GTAGCAATCAGCGTAGTGGCGATACGTTGTG‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCGAGGATCATTGCCAGCCCGCCGAGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCCGCTACCAGAACg                                                                                                                                                                                                                          >  1:4940/1‑250 (MQ=255)                                ccACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAA‑GTAGCAATCAGCGTAGTGGCGATACGTTGTG‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCGAGGATCATTGCCAGCCCGCCGAGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAAt                                                                                                                                                                                                                  >  1:217042/1‑250 (MQ=255)                                 cacaACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAA‑GTAGCAATCAGCGTAGTGGCGATACGTTGTG‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCTAGGATCATTGCCAGCCCGACGAGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCCACCAGAACGAGGGCAATa                                                                                                                                                                                                                 >  1:131615/1‑250 (MQ=255)                                    aaCCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAA‑GTAGAAATCAGCGTAGTGGCGATACGTTGTG‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCGAGGATCATTGCCAGCCCGCCGAGCGGGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGc                                                                                                                                                                                                             <  2:180345/251‑1 (MQ=255)                                              gTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAA‑GTAGCAATCAGCGTAGTGGCGATACGTTGTG‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGGAACCGAGGATCATTGCCAGCCCGCCGAGCGTGCTGCCGATACCATTTTGTATAGCGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACACGGGCAATCAAGCCGTTAAAttt                                                                                                                                                                                                   >  1:235716/1‑251 (MQ=255)                                                      aatcgcCCATTGCACGCGTTTTTTACCAAAA‑GTGGCAATCAGCGTAGTGGCGAAACGT‑GTGGCCGCACCCGTACCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCGAGGATCATTGCCAGCCCGCCGAGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCg                                                                                                                                                                                            <  2:336774/247‑1 (MQ=255)                                                            ccatttaaCGCGTTTTTTCCCAAAATGT‑GCAACCACGGTAGTGGCTATACTGTGTG‑CCGCACCCTGATCAGAAATCAGCTGGCCTAAAAGGGCCCCGAAACCGAGGATCAGTGCAATCCCGCCGAGCGTTCTGCCGATACCAGTTGGTAGAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGAtcatca                                                                                                                                                                                     <  2:258367/244‑1 (MQ=255)                                                              aTTGCACGCGTTTTTTACCAAAA‑GTAGCAATCAGCGTAGTGGCGATACGTTGTG‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCGAGGATCATTGCCAGCCCGCCGAGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAgg                                                                                                                                                                                   <  1:326608/251‑1 (MQ=255)                                                                tGCACGCGTTTTTTACCAAAA‑GTAGCAATCAGCGTAGTGGCGATACGTTGTG‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCGAGGATCATTGCCAGCCCGCCGCGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATTACGCCGTTAACTTTAATGCCGGTCATAAGGa                                                                                                                                                                                  >  2:98155/1‑250 (MQ=255)                                                                  cACGCGTTTTTTACCAAAA‑GTAGCAATCAGCGTAGTGGCGATACGTTGTG‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCGAGGATCATTGCCAGCCCGCCGAGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAGGATaa                                                                                                                                                                               <  1:187522/251‑1 (MQ=255)                                                                                       tAGCAATCAGCGTAGTGGCGATACGTTGTG‑CCGCACCCGTATCAGAAATCAGTTTGCCTAACATGGCCCCGAAACCGAGGATCATTGCCAGCCCGCCGCGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGAAGGCCTGGGCATCAATCCCTTCGGCAAATCAGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGAACATCAGGCTAGGAAGCAGCGCGGCGccagac                                                                                                                                                           >  2:328280/1‑247 (MQ=255)                                                                                             ccAGCGGAGTGGCGTTACGTTGTC‑CCCCCCCCGTACCAGAAACCAGCTTGCCTAACATGCCCCCGAAACCGAGGATCTTTGCCAGCCCGCCGAGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAGGATAAGAAGCAGCGCGACGCCTGCCGCaata                                                                                                                                                     <  2:15271/250‑1 (MQ=255)                                                                                                    aGTGGCGATACGTTGTG‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCGAGGATCATTGCCAGCCCGCCGAGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAGGATAAGAAGCAGCGCGACGCCTGCCGCAATAATGAtt                                                                                                                                               >  1:333471/1‑250 (MQ=255)                                                                                                          gATACGTTGTG‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCGAGGATCATTGACAGCCCGCCGAGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAAACCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAGGATAAGAAGCAGCGCGACGCCTGCCGCAATAATGATTAATgga                                                                                                                                         >  2:238084/1‑249 (MQ=255)                                                                                                                    g‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCGAGGATCATTGCCAGCCCGCCGAGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAGGATAAGAAGCAGCGCGACGCCTGCCGCAATAATGATTAATGGCATAGTCTTTAt                                                                                                                              <  1:9443/251‑1 (MQ=255)                                                                                                                               tATCAGAAATCAGCTTGCCTAAAATGGCCCAGAAACCGAGGATCATTGCCAGCCCGCCGAGCGAGCTGCCGATACCATTTTGAATAGAGAGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGATACCAGCACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCAACAGGATACGAAGCAGCGCGACGCCTGCCGAAATATTGATTAATGGCATAGACTTTATCTCttatt                                                                                                                      >  1:250966/1‑249 (MQ=255)                                                                                                                                               cccTAACATGGCCCCGAACCCGGGTACCATGCCCACCCCGCGAAGCGTCCTGCAAAGTCCATTTTGTATAGAGTGCAGGACGCCCTGTGCATCCAGCCCTCCGACAAATCCGACGACGGAAGCTCCCAGAACGAGGGCAATAAGGCCGTTATCTTTAAAGCCGTTTTTCAGGATAATAAGCATCGCGACGCCTGCCGCAATAATGATTAATGGCATAGCCTTTATCTCTTATTAGTGCCAGAAAagcagc                                                                                                     <  2:29574/249‑1 (MQ=255)                                                                                                                                                                                                 tgcCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAGGATAAGAAGCAGCGCGACGCCTGCCGCAATAATGATTAATGGCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATgccgcc                                                  >  1:309989/1‑251 (MQ=255)                                                                                                                                                                                                    cGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAGGATAAGAAGCAGCGCGACGCCTGCCGCAATAATGATTAATGGCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATc                                               >  2:294843/1‑251 (MQ=255)                                                                                                                                                                                                         cccaatgatatccatgatttgctcgatggtgcgtccattacgtcggcAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAGGATAAGAAGCAGCGCGACGCCTGCCGCAATAATg                                                                                                                                                  >  1:116347‑M2/48‑147 (MQ=255)                                                                                                                                                                                                         cccaatgatatccatgatttgctcgatggtgcgtccattacgtcggcAAATCCGACGACGGCAGCTACCAGAACGAGGGAAATAAAGCCGTTAACTTTAAAGCCGATCATCAGGATAAGAAGCAGCGCGACGCCTGCCGCAATAATg                                                                                                                                                  <  2:116347‑M2/100‑1 (MQ=255)                                                                                                                                                                                                                  ataGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAGGATAAGAAGCAGCGCGACGCCTGCCGCAATAATGATTAATGGCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGt                                 <  1:294843/251‑1 (MQ=255)                                                                                                                                                                                                                   gagagTGCGAGACGGCCTGGGCATCCATCCATTCGGAAAATCCGGAGACGGCAGCTACCAGAACGAGGGAAAAAAAGCCGTAAACTTTAAAGCCGATCATCAGGATA‑GAAGCAGCGCGACGCCTGCCGCAATAATGATTAATGGCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTgg                               <  2:73689/250‑1 (MQ=255)                                                                                                                                                                                                                       gTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAGGATAAGAAGCAGCGCGACGCCTGCCGCAATAATGATTAATGGCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCg                            >  1:202217/1‑251 (MQ=255)                                                                                                                                                                                                                                                 cgtcgtcAAATCCGACGCCTGCAGATACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAGTATAAGAAGCAGCGCGACGCCTGCTGCAATAATGATTAATGGCATAGTCTTTATCTCTTATTAGTTTCAGAAAAGCAGCGCTTTCGCGCTTCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTgaaga  <  1:220168‑M2/244‑1 (MQ=255)                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                    ACAAAACCCACTTCAAAAAACATGGCGAGGCCCACAACCAGACCGGTGATCACTAGCGCCCATTGCACGCGTTTTTTACCAAAA‑GTAGCAATCAGCGTAGTGGCGATACGTTGTG‑CCGCACCCGTATCAGAAATCAGCTTGCCTAACATGGCCCCGAAACCGAGGATCATTGCCAGCCCGCCGAGCGTGCTGCCGATACCATTTTGTATAGAGTGCAGGACGGCCTGTGCATCCATCCCTTCGGCAAATCCGACGACGGCAGCTACCAGAACGAGGGCAATAAAGCCGTTAACTTTAAAGCCGATCATCAGGATAAGAAGCAGCGCGACGCCTGCCGCAATAATGATTAATGGCATAGTCTTTATCTCTTATTAGTGCCAGAAAAGCAGCGCTTTCGCGCTGCACGTAGGGGGGCTGTTAAACAGCCACTAACATGCCGCCATCAACAAACAACAGGTGGCCGTTTACGAAATCAGAGGCTTTTGAAGA  >  NC_000913/4492170‑4492658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.