| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4491693 | 34 (0.940) | 3 (0.080) | 3/476 | 3.0 | 9.6% | coding (833/1320 nt) | idnT | L‑idonate/5‑ketogluconate/gluconate transporter |
| ? | NC_000913 | 4492415 = | 23 (0.650) | coding (111/1320 nt) | idnT | L‑idonate/5‑ketogluconate/gluconate transporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCGCGACGGTGGCAGAGCCCAGAGCGATACGCAACAGCGCCGCAACAGTCCAGCACATCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATA‑CTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCA > NC_000913/4491454‑4491939 | ccGCGACGGTTGCAGAGCCCAGAGCTATACGCAACAGCGCCGCAACAGTCCAGCACATCAATAACGGCGAAAGTTTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTTCATTACGTCGGCCCAGTGTGaaa < 2:377572/251‑1 (MQ=255) cccAGAGAGAAACGCAACAGAGCCGCAACAGTCCAGAAAATAAATAACGGCGAAAGTGGATTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCGGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGc < 2:338233/251‑1 (MQ=255) gATACGCAACAGCGCCGCAACAGTCCAGCACATCAATAACGGCGAAAGTGTAGTTCCGGACATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGAAATAACAATGGCAATAAAc > 1:310938/1‑250 (MQ=255) aCGCAACAGCGCCGCAACAGTCCAGCACATCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAgcg < 2:252775/251‑1 (MQ=255) gccgcAACAGTCCAGCACATCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAgg < 2:207480/251‑1 (MQ=255) cAGTCCAGCACATCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCg > 1:111072/1‑251 (MQ=255) aGCACATCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGAAAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAAt > 1:44877/1‑251 (MQ=255) tCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCaa > 1:200504/1‑249 (MQ=255) aCGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAgg > 1:95806/1‑251 (MQ=255) cGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGgc < 1:325457/251‑1 (MQ=255) cGGCGAAAGGGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTAATAATACCTGCTTAAAAGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATAATATCCATGATTTGCTCGATGGTGCGTCCTTTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGCGTTACCGACAACTTCAaagaacggac > 1:14866/1‑246 (MQ=255) ttCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGtt > 1:170934/1‑251 (MQ=255) tCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGtt < 2:273227/250‑1 (MQ=255) cGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTc < 1:67447/251‑1 (MQ=255) tgAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAAttt > 2:265995/1‑251 (MQ=255) ataGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATGTGCGCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACaa < 1:248749/250‑1 (MQ=255) gaccGACACCGCTATCAACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAAGGATATCCATGATGTGCTCGATGGTGCGTCCATTACGTCGGCCCAGGGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAAcggc < 2:288067/248‑1 (MQ=255) tATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGGTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATc > 1:306326/1‑251 (MQ=255) ttAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCAc > 1:25131/1‑251 (MQ=255) aaaCGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTATCGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACg < 1:103379/250‑1 (MQ=255) aaCGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATTGTGCTTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAAGTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGc < 2:154639/251‑1 (MQ=255) cgccgccgcCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAAGGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGTATGACCGGGATCACGGCAGCg < 2:163321/251‑1 (MQ=255) cgcctgctgCGATAATAAACACAAACATCGCGATAGCGCCAATAGAACCCCCAAGGATAGCCATGAGTTGTTCGATGGTGCGTCCATGACGTCGGCCCAGTGGAAAAATCGCAATAAAAATGGCAATAGACAGAGCAACGGCAGGGGTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGTATCACGGCAGCGaaa < 2:137935/243‑1 (MQ=255) cgccAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGAACGGTGTTAGTTTTCGGTAACGTAATTTCACAAAAGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAAt > 2:354183/1‑250 (MQ=255) cAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATA‑CTg > 1:73785/1‑251 (MQ=255) aataaACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATA‑CTGTTCCAg < 1:273195/250‑1 (MQ=255) gcgATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCAGCCCAGTGTGAAAATCGCACTAACAATGCCCATAAACAGCGCAACGGCAGGGTTCCCGACCAATTCAAAGCAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCCCAAACGGCGGCGACAGCCCTCCGGATGACCGGGATCACGGCAGCGAAAAAAACT‑TTCCAGAAGGAGGGCCTctcccc > 2:186013/1‑249 (MQ=255) cTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATA‑CTGTTCCAGAAGGAGGGCATCCCCTCTTCGCTaacc > 2:115023/1‑249 (MQ=255) aaTCCCCAATGATATCCATGATTTGCTCGATGGTGCGGCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATA‑CTGTTCCAGAAGGAGGTCATCTCCTCTTCGCTAAACAGATGa < 1:325694/251‑1 (MQ=255) cccAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCaaatccgacgacggcagctaccagaacgagggcaataaagccgttaactttaaagccgatcatcaggataagaagcagcgcgacgcctgccgcaataatg > 1:116347‑M1/1‑47 (MQ=255) cccAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCaaatccgacgacggcagctaccagaacgagggaaataaagccgttaactttaaagccgatcatcaggataagaagcagcgcgacgcctgccgcaataatg < 2:116347‑M1/147‑101 (MQ=255) aaTGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATA‑CTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTa > 1:299189/1‑250 (MQ=255) cGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATA‑CTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCt < 2:98830/251‑1 (MQ=255) ggTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGATAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATA‑CTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTtct < 2:61748/251‑1 (MQ=255) gTCCATTACGTCGGCCCAGTGTGAAAAGCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGGTACCGACAAATTCAAAGAAGAGGCGCACGGAGTTAGTTTTCGGTAACGAAATTTCACAAACGGCGGCGATCGCCATCAGGATGACCGGGATCACGGCAGCGAAAATC‑CTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGCGGAATAAATAAGCCTTCCGGTGGAGCTTTCTCaac > 2:92392/1‑249 (MQ=255) cgtcgtCaaatccgacgcctgcagataccagaacgagggcaataaagccgttaactttaaagccgatcatcagtataagaagcagcgcgacgcctgctgcaataatgattaatggcatagtctttatctcttattagtttcagaaaagcagcgctttcgcgcttcacgtaggggggctgttaaacagccactaacatgccgccatcaacaaacaacaggtggccgtttacgaaatcagaggcttttgaaga < 1:220168‑M1/251‑245 (MQ=255) ccGGCCCAGTGGGAAAAGCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATA‑CTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGAGTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCa < 2:170934/250‑1 (MQ=255) | CCGCGACGGTGGCAGAGCCCAGAGCGATACGCAACAGCGCCGCAACAGTCCAGCACATCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATA‑CTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCA > NC_000913/4491454‑4491939 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |