New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 449169334 (0.940)3 (0.080) 3/476 3.0 9.6% coding (833/1320 nt) idnT L‑idonate/5‑ketogluconate/gluconate transporter
?NC_000913 4492415 = 23 (0.650)coding (111/1320 nt) idnT L‑idonate/5‑ketogluconate/gluconate transporter
Rejected: Frequency below/above cutoff threshold.

CCGCGACGGTGGCAGAGCCCAGAGCGATACGCAACAGCGCCGCAACAGTCCAGCACATCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCA  >  NC_000913/4491454‑4491939
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                       
ccGCGACGGTTGCAGAGCCCAGAGCTATACGCAACAGCGCCGCAACAGTCCAGCACATCAATAACGGCGAAAGTTTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTTCATTACGTCGGCCCAGTGTGaaa                                                                                                                                                                                                                                              <  2:377572/251‑1 (MQ=255)
                 cccAGAGAGAAACGCAACAGAGCCGCAACAGTCCAGAAAATAAATAACGGCGAAAGTGGATTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCGGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGc                                                                                                                                                                                                                             <  2:338233/251‑1 (MQ=255)
                         gATACGCAACAGCGCCGCAACAGTCCAGCACATCAATAACGGCGAAAGTGTAGTTCCGGACATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGAAATAACAATGGCAATAAAc                                                                                                                                                                                                                      >  1:310938/1‑250 (MQ=255)
                            aCGCAACAGCGCCGCAACAGTCCAGCACATCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAgcg                                                                                                                                                                                                                  <  2:252775/251‑1 (MQ=255)
                                      gccgcAACAGTCCAGCACATCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAgg                                                                                                                                                                                                        <  2:207480/251‑1 (MQ=255)
                                             cAGTCCAGCACATCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCg                                                                                                                                                                                                 >  1:111072/1‑251 (MQ=255)
                                                   aGCACATCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGAAAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAAt                                                                                                                                                                                           >  1:44877/1‑251 (MQ=255)
                                                         tCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCaa                                                                                                                                                                                       >  1:200504/1‑249 (MQ=255)
                                                               aCGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAgg                                                                                                                                                                               >  1:95806/1‑251 (MQ=255)
                                                                cGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGgc                                                                                                                                                                              <  1:325457/251‑1 (MQ=255)
                                                                cGGCGAAAGGGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTAATAATACCTGCTTAAAAGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATAATATCCATGATTTGCTCGATGGTGCGTCCTTTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGCGTTACCGACAACTTCAaagaacggac                                                                                                                                                                              >  1:14866/1‑246 (MQ=255)
                                                                              ttCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGtt                                                                                                                                                                >  1:170934/1‑251 (MQ=255)
                                                                               tCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGtt                                                                                                                                                                <  2:273227/250‑1 (MQ=255)
                                                                                 cGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTc                                                                                                                                                             <  1:67447/251‑1 (MQ=255)
                                                                                              tgAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAAttt                                                                                                                                                >  2:265995/1‑251 (MQ=255)
                                                                                                    ataGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATGTGCGCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACaa                                                                                                                                           <  1:248749/250‑1 (MQ=255)
                                                                                                         gaccGACACCGCTATCAACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAAGGATATCCATGATGTGCTCGATGGTGCGTCCATTACGTCGGCCCAGGGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAAcggc                                                                                                                                      <  2:288067/248‑1 (MQ=255)
                                                                                                                     tATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGGTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATc                                                                                                                         >  1:306326/1‑251 (MQ=255)
                                                                                                                                      ttAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCAc                                                                                                        >  1:25131/1‑251 (MQ=255)
                                                                                                                                        aaaCGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTATCGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACg                                                                                                       <  1:103379/250‑1 (MQ=255)
                                                                                                                                         aaCGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATTGTGCTTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAAGTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGc                                                                                                     <  2:154639/251‑1 (MQ=255)
                                                                                                                                             cgccgccgcCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAAGGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGTATGACCGGGATCACGGCAGCg                                                                                                 <  2:163321/251‑1 (MQ=255)
                                                                                                                                                cgcctgctgCGATAATAAACACAAACATCGCGATAGCGCCAATAGAACCCCCAAGGATAGCCATGAGTTGTTCGATGGTGCGTCCATGACGTCGGCCCAGTGGAAAAATCGCAATAAAAATGGCAATAGACAGAGCAACGGCAGGGGTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGTATCACGGCAGCGaaa                                                                                              <  2:137935/243‑1 (MQ=255)
                                                                                                                                                   cgccAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGAACGGTGTTAGTTTTCGGTAACGTAATTTCACAAAAGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAAt                                                                                            >  2:354183/1‑250 (MQ=255)
                                                                                                                                                      cAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATACTg                                                                                       >  1:73785/1‑251 (MQ=255)
                                                                                                                                                             aataaACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATACTGTTCCAg                                                                                 <  1:273195/250‑1 (MQ=255)
                                                                                                                                                                             gcgATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCAGCCCAGTGTGAAAATCGCACTAACAATGCCCATAAACAGCGCAACGGCAGGGTTCCCGACCAATTCAAAGCAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCCCAAACGGCGGCGACAGCCCTCCGGATGACCGGGATCACGGCAGCGAAAAAAACTTTCCAGAAGGAGGGCCTctcccc                                                                >  2:186013/1‑249 (MQ=255)
                                                                                                                                                                                       cTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCCCCTCTTCGCTaacc                                                      >  2:115023/1‑249 (MQ=255)
                                                                                                                                                                                             aaTCCCCAATGATATCCATGATTTGCTCGATGGTGCGGCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGTCATCTCCTCTTCGCTAAACAGATGa                                                <  1:325694/251‑1 (MQ=255)
                                                                                                                                                                                                 cccAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCaaatccgacgacggcagctaccagaacgagggcaataaagccgttaactttaaagccgatcatcaggataagaagcagcgcgacgcctgccgcaataatg                                                                                                                                                     >  1:116347‑M1/1‑47 (MQ=255)
                                                                                                                                                                                                 cccAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCaaatccgacgacggcagctaccagaacgagggaaataaagccgttaactttaaagccgatcatcaggataagaagcagcgcgacgcctgccgcaataatg                                                                                                                                                     <  2:116347‑M1/147‑101 (MQ=255)
                                                                                                                                                                                                    aaTGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTa                                          >  1:299189/1‑250 (MQ=255)
                                                                                                                                                                                                                        cGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCt                     <  2:98830/251‑1 (MQ=255)
                                                                                                                                                                                                                            ggTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGATAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTtct                 <  2:61748/251‑1 (MQ=255)
                                                                                                                                                                                                                                 gTCCATTACGTCGGCCCAGTGTGAAAAGCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGGTACCGACAAATTCAAAGAAGAGGCGCACGGAGTTAGTTTTCGGTAACGAAATTTCACAAACGGCGGCGATCGCCATCAGGATGACCGGGATCACGGCAGCGAAAATCCTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGCGGAATAAATAAGCCTTCCGGTGGAGCTTTCTCaac             >  2:92392/1‑249 (MQ=255)
                                                                                                                                                                                                                                         cgtcgtCaaatccgacgcctgcagataccagaacgagggcaataaagccgttaactttaaagccgatcatcagtataagaagcagcgcgacgcctgctgcaataatgattaatggcatagtctttatctcttattagtttcagaaaagcagcgctttcgcgcttcacgtaggggggctgttaaacagccactaacatgccgccatcaacaaacaacaggtggccgtttacgaaatcagaggcttttgaaga     <  1:220168‑M1/251‑245 (MQ=255)
                                                                                                                                                                                                                                           ccGGCCCAGTGGGAAAAGCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGAGTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCa  <  2:170934/250‑1 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                       
CCGCGACGGTGGCAGAGCCCAGAGCGATACGCAACAGCGCCGCAACAGTCCAGCACATCAATAACGGCGAAAGTGTAGTTCCGGTCATTAAGTGTGAAATATAGTGCCCGACACCGCTATCTACTAATACCTGCTTAAACGCGCCGCCGCCAGCGATAATAAACACAATCATCGCGATAGCGCCTATAGAATCCCCAATGATATCCATGATTTGCTCGATGGTGCGTCCATTACGTCGGCCCAGTGTGAAAATCGCAATAACAATGGCAATAAACAGCGCAACGGCAGGGTTACCGACAAATTCAAAGAAGAGGCGCACGGTGTTAGTTTTCGGTAACGTAATTTCACAAACGGCGGCGATAGCCATCAGGATGACCGGGATCACGGCAGCGAAAATACTGTTCCAGAAGGAGGGCATCTCCTCTTCGCTAAACAGATGAGGATTAAATAAGCCTTCCGGTGGTGCTTTCTCAAAGCGAGTTAGCA  >  NC_000913/4491454‑4491939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.