| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,542,469 | IS1 (+) +9 bp | coding (433‑441/597 nt) | fimE → | regulator for fimA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 24 (0.660) | 23/486 | 0.5 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 4542469 = | 0 (0.000) | coding (433/597 nt) | fimE | regulator for fimA | |||||
| * | ? | NC_000913 | 3583428 = | NA (NA) | 24 (0.670) | 22/484 | 0.5 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 4542477 | 0 (0.000) | coding (441/597 nt) | fimE | regulator for fimA | |||||
TTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGT > NC_000913/4542221‑4542718 | caccctttgacgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGaa < 1:39770‑M2/3‑1 (MQ=255) cctttgacgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaatggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAattc < 2:79080‑M2/6‑2 (MQ=255) tttgacgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTGGc > 2:11525‑M2/244‑251 (MQ=255) ttgccggtgtgatatggattacggatggcgggccgttgtatgattcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaagaagttggagtcattaccGAATTgg < 2:192471‑M2/7‑1 (MQ=255) gaagaaCGGATTTTCTTCCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCGCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtg > 2:378866‑M2/1‑247 (MQ=255) gtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTGGCGGAGCg > 1:186043‑M2/238‑251 (MQ=255) gtggggatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTGGCGGAGCg < 2:134140‑M2/14‑1 (MQ=255) ggatatggaggacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTTGCTGAGCgtggt < 1:91396‑M2/18‑1 (MQ=255) ttCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtgatgctgccaac > 1:146848‑M2/1‑235 (MQ=255) atgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTGGCGGAGCGTGGTGCAGATAc < 2:293902‑M2/26‑1 (MQ=255) gTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtgatgctgccaacttactgatttagtgta > 1:372763‑M2/1‑220 (MQ=255) cgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGAt > 1:268361‑M2/210‑251 (MQ=255) cccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaagtgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCAt < 2:186043‑M2/54‑1 (MQ=255) ccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAAGTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATc < 2:330131‑M2/55‑1 (MQ=255) gggaACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttctgaggtgctccagt > 2:45928‑M2/2‑194 (MQ=255) ggAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt > 1:320097‑M2/1‑193 (MQ=255) ggACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtgatgctgccaacttactgatttagtgta > 1:205684‑M2/1‑185 (MQ=255) aaCTTGCTAACTGGAAAGTCTCTGACCGGACTGACGCTATTTTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCTCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTAGGAATTGGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtgtcttctgtttctatcag > 2:275088‑M2/1‑176 (MQ=255) agcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGcc < 1:270948‑M2/87‑1 (MQ=255) tGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTAGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtgatgctgaccaattactgatttagtggttgtaggtgtttttgaggtgctccagtggcttctgtttctatcagcagt < 1:176210‑M2/251‑80 (MQ=255) cgatatacgcagcgaattgagcggcacaacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGcc > 1:135694‑M2/163‑249 (MQ=255) acgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaccactatcaataagttggagtcattaccGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAAtg < 1:59884‑M2/94‑1 (MQ=255) gcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTc < 1:87795‑M2/100‑1 (MQ=255) cTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtgatgctgccaacttactggttttgtgtatgatggggttttttaggtgctccagtggcttttgtttttatccgctgttccccctgttcagctac < 1:194155‑M2/251‑97 (MQ=255) tGACCGGACTGACGCTATATTTATTTATCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggggatgctgccaactttctgatttagtgtatgatggggttttt < 1:294968‑M2/198‑45 (MQ=255) cggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGAt < 2:351900‑M2/42‑1 (MQ=255) cggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGAt > 1:351900‑M2/142‑183 (MQ=255) aacctgaatcggaggcagcaccgggcacggctgggacggaaggcgctgtcgttctcaaaatcggtggagctgcaggacaaagtcatcgggcattatctgaacataaaccactatcaaaaagttggagtcattaccGAATGGGGGGAGGGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATGCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATg < 2:64027‑M2/116‑1 (MQ=255) ttatttCGCGCCGCTGGAGTCGGCTTTCTCGCTAGCAGGCCTATCGCATTATTCGCGATGACGGTTTTGAAGCGGGAATCGTAACGCAGACTCATCCGCATATGTTAAGGCATGCTGTCGGTTATGAATTGGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgcgccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacg > 2:211487‑M2/1‑134 (MQ=255) gAGTCGGCTTTCTCGCCAGCAGGCCTTTCGCATTATTCGCGATGCCGTTATTGAAGTGGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttcggtttctaccagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgga > 2:147398‑M2/1‑118 (MQ=255) gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaaaaagttggattcattaccGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAAt < 1:255595‑M2/145‑1 (MQ=255) gCTTTCTCGCCAGCAGGCCTATCGCATTAGTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcag > 1:91762‑M2/1‑112 (MQ=255) caacggaagtcgcggtcgtcccaaaaatcggtggagctgcatgacaaagtaatctggcattatctgaacataaaccaccaacaaaaagttggagtcattaccAATTTGGCGGAGCGTGGTGCAGATACTCTTTTAATTCAGGATTATCTCGGTCATCGAAATATTCCCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTaaa < 2:74382‑M2/149‑1 (MQ=255) acggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTaaa > 1:74382‑M2/101‑249 (MQ=255) attCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggcgatgctgccaacttactgatttagtgtttgatggtgtttttgaggtgctcccgtggcttctgtttctatcaactgtacctcctggtcagctactgacggggtggggcggtacggccaaagcaccgccggacatccgcgctttctctgctctcactgccgtaaa < 1:339901‑M2/250‑167 (MQ=255) cgATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggggatgctgccaacttactgatttagtgtatgatggtgttttttaggtgctccagtggcttctgtttctttaagctttccctcccgttcggcttcctccggggtggtgcggaaccgcaaaagcaccgccggacaatagagctatctctgctcccacttccgtaaaacatgg < 2:101303‑M2/251‑173 (MQ=255) gagctgcttgtccaagtcatcgggcattatctgaacatcaaacactctcaataagttggcatcattaccGAATTGGAGGAACGTGGTGCAGATACTCGTTTACTTCAGGATTATCTCGGGCATCGAAATATTCGCCATAATGTGCGTTATACCGCAAGTAGTGCTGCTCGTTTTGCCGGATTATGGGAAAGCAATAATCTCATAACCGAACAATTAAAAAGAGAAGAGGTTTGATTTAACttattgctcat > 2:28595‑M2/70‑246 (MQ=255) aTGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtgatgctgccaacttactgatttagtgtatggtggtgttttttaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcgaatgacggggtggtgcgtaacggcaaaagcaccgccggaaataagcgctatctctgctctcactgcctttaaaacaggc < 1:197952‑M2/250‑174 (MQ=255) tgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGaaaa > 1:127805‑M2/66‑208 (MQ=255) cGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggggatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggggcggaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactg < 1:272228‑M2/251‑179 (MQ=255) gacaaatgcatcgtgcattatctgaacgtaaaacattataaataagttgaagtcattaccGAATTGGCGGGGCGGGGTGAAGATACTAGTTTAATTCAGGATTATCTCGGGAATCGAAATATTCGCAATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAATAAATAATCTCATAAACGAAAAATTAAAAATAGAAGATGTTTGATTTAACTTATTGATAATAAAGTTaa < 1:288949‑M2/190‑1 (MQ=255) gTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcttaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgctt > 1:363823‑M2/1‑54 (MQ=255) atGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtgatgctgccaacttactgattttgtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggggcgtaacggccaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatgacaactgcagttcacttacaccgcttctcaacccggtacgcacc < 1:376226‑M2/248‑216 (MQ=255) tGTTAAGGCATGCTTGCGGTTATGAATTGGCGggtgatgctgccaacttactgatttagggtatgatggtgtttttgaggtgctcccgtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggggcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccaga < 1:294690‑M2/250‑219 (MQ=255) gCATGCTTGCGGTTATGAATTGGCGggtgatgctgcccacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggccactgcagttcacttacaccgattctcaacccggtacgcacccgaaaatcatt < 1:379173‑M2/251‑227 (MQ=255) cTTGCGGTTATGAATTGGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggggctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgggggggtgcgtaacggcaaaagcaccgccggaaatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatat < 1:49408‑M2/251‑232 (MQ=255) tGAATTGGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactggcggggtggtgcgtaaacgcaaaagcaccgccggacatcaacgatctctctgctctcactgccgtcaaacatggcaactgcagttcacttacaccgcctctcaacccggtaagcaacagaaaatcattgatttggccatgaat < 1:192471‑M2/251‑242 (MQ=255) | TTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGTTACGT > NC_000913/4542221‑4542718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |