Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,105,699	IS1 (+) +9 bp	coding (286‑294/312 nt)	ymdA →	uncharacterized protein YmdA

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	290634 =	NA (NA)	50 (1.050)	45/486	0.1	98.0%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	1105699 =	1 (0.020)					coding (286/312 nt)	ymdA	uncharacterized protein YmdA
*	?	NC_000913	= 291401	NA (NA)	53 (1.110)	46/486	0.1	98.1%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 1105707	1 (0.020)					coding (294/312 nt)	ymdA	uncharacterized protein YmdA

AACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/291155‑291401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCAGCAATGGCAATAAAAGGAAA  <  NC_000913/1105707‑1105459                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCCTGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGGCAGCTGATAGACACAGAAGCCACTGGAGCACCTCAAAAACACCATCCTACACTAACTCAGTAAGTTGGCAGCATCACCCATT                                                                                                                                                                                                                                                       >  1:30688/1‑251     CCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACcg                                                                                                                                                                                                                                                   >  2:10900/1‑249         TCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCC                                                                                                                                                                                                                                                 >  1:330354/1‑249         TCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATAATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCC                                                                                                                                                                                                                                                 >  2:404554/1‑249          aATGGCCATATCAATGATTTTCTGGTGAGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCGGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGC                                                                                                                                                                                                                                              <  1:416268/250‑1             GGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTT                                                                                                                                                                                                                                           <  2:422081/251‑1              GCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTT                                                                                                                                                                                                                                          <  1:243945/251‑1                CATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAAGCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTC                                                                                                                                                                                                                                        <  1:92970/251‑1                    TCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGCGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGGCAGCTGATAGAAACAGAAGACACTGGAGCACCTCAAAAACAACATCATACACTAAATCAGTAAGTTGGCAGCCACCCCCATTACCGCCATCTTTTTCTGTT                                                                                                                                                                                                                                    >  2:432557/1‑251                               CTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATAC                                                                                                                                                                                                                         >  1:289230/1‑251                                                GAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGG                                                                                                                                                                                                         <  1:178458/250‑1                                                 AGAAGCGGTGTAAGTGACCTGCAGTTGCCATGTTTTACGGCAGTTAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGTCAGCATCACCTATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCT                                                                                                                                                                                                       <  2:330227/251‑1                                                         gGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGC                                                                                                                                                                                               <  2:481995/250‑1                                                            AAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTT                                                                                                                                                                                            <  1:321587/251‑1                                                              GTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTT                                                                                                                                                                                          <  2:353289/251‑1                                                                                     ACGGCAGTGAGATCAGAGCTAGCGCTGATGTCCGGCAGTGCTTTTGCCTTTACGCACCATCCCGTCAGTAGCTTAACAGGAGGGACAGCTGATAGAAACAGCAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAATTTGGCAGCATCATCTACTACATCCAGCTTTTTCTGTTTATCAAGATACTGCATTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGC                                                                                                                                                                    <  1:469565/250‑1                                                                                      CGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCATTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTGTACTGAGGCTAGTTGCTCGGTTTTGACAGTGCCTCTCATTAACGCTT                                                                                                                                                                  <  1:438322/251‑1                                                                                          gGTGATAGCAGAGATAGCGCTGATGTCCGGCAGTTCTGTTGCCGTTACTCACCACCCCTTCAGTAGCTGAACAGGAGGGACAGCAGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCATTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCGCATTAACGCTTTGCT                                                                                                                                                              <  2:421165/250‑1                                                                                              AGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGG                                                                                                                                                            >  1:263292/1‑249                                                                                                   AGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGT                                                                                                                                                     >  2:55016/1‑251                                                                                                           CGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTCGGTTTTGCCCG                                                                                                                                             >  1:283219/1‑251                                                                                                            gctgagggCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGG                                                                                                                                            <  2:193103/243‑1                                                                                                                ATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATA                                                                                                                                        <  1:366112/251‑1                                                                                                                          GTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAAAAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCAAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCT                                                                                                                              >  1:170742/1‑251                                                                                                                            GCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTG                                                                                                                             <  1:10900/250‑1                                                                                                                                     GTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTC                                                                                                                   >  2:429615/1‑251                                                                                                                                       TACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCA                                                                                                                  <  1:414565/250‑1                                                                                                                                                      CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGA                                                                                                                                                                                       >  1:272740/1‑166                                                                                                                                                      CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGA                                                                                                                                                                                       <  2:272740/166‑1                                                                                                                                                                   GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACG                                                                                     <  1:281854/251‑1                                                                                                                                                                     AGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACACATTACAGCCAGATTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGAAATTGCCGCTCATTAACGCTTTGCTGGCGTAGGTTTTGCCCGGAATAGAACCATGCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTC                                                                                   >  1:46963/1‑251                                                                                                                                                                               GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTGGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATGCTGTGGGCAGTTCATTTCTACGTGTGATGACTGGGTGCTGACGTCACATGCCG                                                                           <  1:216453/249‑1                                                                                                                                                                                 aaaAAACAGAAGCCACTGGAGCACCACAAAAACCCCAATATACACTAAATCAGTAAGGTGTCAGCATCACCCATTACATCCAGCTTTTTCTGTTTATCAAGATACTGCACTGTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGCCTGGGTGCTGACGTCACATGCCGGTTC                                                                       <  2:340708/248‑1                                                                                                                                                                                 aAGAAACAAAACCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGTCAGCATCCCCCATTACAGCCAGCTTGTTCTGTTCATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCTGTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATATAACCATTCTGTGGGCAGTTCCTTTCTACGGGTGATGACTGGGTGCTGACTTCCCAGGCCGGTTC                                                                       <  2:46963/250‑1                                                                                                                                                                                       CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATA                                                                                                                                                                                                                          <  1:101266/98‑1                                                                                                                                                                                       CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATA                                                                                                                                                                                                                          >  2:101266/1‑98                                                                                                                                                                                         GAAGCCACTGGAGCACCTCAAAAACCCCATCATACTCTAAAGCAGTAAGTTGGCAGCAGCTCCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTTCTGAGGCTATGTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCATTTCATTTCTACAGGTGATGACTGGGGGCTGACGTCACATGCCGGTTCCACAATTT                                                               <  2:496717/251‑1                                                                                                                                                                                         GAAGCCACTGGAGCACCTCAAAAACACCATCATACCCTAAATCATTAAGTTGGCAGCATCTCCCATTACAGCCATCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTTATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTT                                                               <  1:112282/251‑1                                                                                                                                                                                           AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGG                                                             <  1:424295/251‑1                                                                                                                                                                                              ccCTGGAGCCCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACAGTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCA                                                          <  2:330354/249‑1                                                                                                                                                                                                      ccCCTCAAAAACCCCATCATACCCTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTTTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATG                                                  <  2:398267/249‑1                                                                                                                                                                                                               AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGACAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGATCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTACACAATTTGGCCATAAAAATGGATCACGCC                                         >  2:227067/1‑251                                                                                                                                                                                                                            ACTAAATCAGTAAGTTGTCTGCATCACCCATTACAGCCAGCTTTTTCGGTTTATCAAGATACTGCATCTTTACTGAGGCTATTTGCGCGTTTTTGCCATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGTAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCGACAATTTGGCCATAAAAATGGATCACGCCTCCTTGCCCGGTG                            <  2:176969/251‑1                                                                                                                                                                                                                            ACTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTG                            <  1:390007/251‑1                                                                                                                                                                                                                             CTAAATCAGTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTTACATGCCGGTTCCCCAATTTGGCCATAAAAAAGGATCACACCCCCTTACACGGTGC                           >  1:256155/1‑251                                                                                                                                                                                                                                  cCAGTAAGTGGGCAGCCTCACCCATTCTAGCCAGCTTTTTCTGTTTATCAAGAGACTGCTCTTTTCCTGAGGCTATTTGCGCGTTTTTGACATTTCCGCTCATTAACGCTTTGCTGGAGTAGGTGTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACGGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCA                      <  2:338495/250‑1                                                                                                                                                                                                                                     GTAAGTTGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCAGC                    >  2:122185/1‑250                                                                                                                                                                                                                                           TGGCAGCATCCCCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTCCTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCCCGGTGCTTCCAGCAATGGC              >  2:436355/1‑250                                                                                                                                                                                                                                           TGGCAGCATCACCCATTACAGCCCGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGCCTGGGTGCTGACGTCACATGACGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGACCGGTGCTTCCAGCAATGGa              >  2:183630/1‑249                                                                                                                                                                                                                                           TGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCG                                                                           >  1:197350/1‑189                                                                                                                                                                                                                                           TGGCAGCATCACCCATTACAGCCAGCTTTTTCTGTTGATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCG                                                                           <  2:197350/189‑1                                                                                                                                                                                                                                                  ATCACCCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCAGCAATGGCAATAAAAG      <  1:231429/251‑1                                                                                                                                                                                                                                                       CCATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCTTAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCAGCAATGGCAATAAAAGGAAA  >  1:416573/1‑250                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/291155‑291401 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTACAGCCAGCTTTTTCTGTTTATCAAGATACTGCACTTTTACTGAGGCTATTTGCGCGTTTTTGACATTGCCGCTCATTAACGCTTTGCTGGAGTAGGTTTTGCCCGGAATAGAACCATTCTGTGGGCAGTTCATTTCTACGGGTGATGACTGGGTGCTGACGTCACATGCCGGTTCCACAATTTGGCCATAAAAATGGATCACGCCCCCTTGCACGGTGCTTCCAGCAATGGCAATAAAAGGAAA  <  NC_000913/1105707‑1105459

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.