New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2288919 =	NA (NA)	24 (0.830)	23/486	0.3	96.0%	noncoding (1195/1195 nt)	IS5	repeat region
	?	NC_000913	3131469 =	1 (0.030)					coding (940/1068 nt)	yghQ	putative transport protein YghQ

AAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGAATACCGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGG  >  NC_000913/3131225‑3131714                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      ggtagctgaaaaacgatgaccaacaggcgatggtattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataaccccttaaagggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcgtctcaaacatgaagaaatgaaatgactgagtcagccaagaagaatttcccctcttattcgcaccttccCTaacaa                                                                                                                                                                                                                                                 <  2:90285‑M2/7‑1 (MQ=255)     gctgaaaaacgaaaaccaaccggcgacgttattcacggtggccaacctgtttcgggcgtaccaaatgatacggcagttgtagagatctcactaaaaacttgggataacgccttaaatggcgaagaaacgggcgaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcacctttcCTAACAACCa                                                                                                                                                                                                                                              <  2:348981‑M2/10‑1 (MQ=255)                                   attcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAACCACGGtctggtggtgcgcgggtataaaagcaga                                                                                                                                                                                                               <  1:68998‑M2/41‑14 (MQ=255)                                    ttcacgctggccaacctgtttcgggcggaccaaatgataagccagtgggagagctctcactaaaaactgggcatcacgccttaaatggcgaagaaacggtcaaaataggctgattcaaggcatttacgggaaaaaaaatcggatcaaacatgaagaaaagaaatgtctgagtcagccgagaagaattaccccgacaattcgcaacttccCTAACAACAAAGGTCTGGTGGTGCGcggatctaaaacaatcc                                                                                                                                                                                                              >  2:352432‑M2/210‑244 (MQ=255)                                            ggacaacctgtttcgggcggaccaaatgatacgtcagggggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctaaaacatgaagaaaggaaatgactgagtcagccgagaagaatttccccgcttattcgcgccttccCTAACAACCACGGTCTGGTGGTGCGCGTATCTAAACGCATCACCTCTgg                                                                                                                                                                                                       <  1:8652‑M2/49‑1 (MQ=255)                                                               aaatgaaatgACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCAGCTTGCCGACGATAAACAACGCGAGCGCCACCAGAATACCGATTCCGCCCTCCAGAAAACCGGACTTCACACCTAACAACCACGGTCTGGAGCGACGCGGATCTAAACGCACCACCTCTGGGAAAAAACTTTTACCCAGc                                                                                                                                                                                    >  1:195184/1‑250 (MQ=38)                                                                     atgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAACCACGGTCTGGTGGTGcgcg                                                                                                                                                                                                                             <  1:130294‑M2/27‑1 (MQ=255)                                                                     atgatacgtcagtgggagagatatcactaaaaaatggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcccagcttattcgaaccttccCTAACAACCacggtctggtggagagcg                                                                                                                                                                                                                             >  2:130294‑M2/177‑197 (MQ=255)                                                                        atacgtcagtgggagagaactcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTg                                                                                                                                                                          <  2:323880‑M2/78‑1 (MQ=255)                                                                                    gagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCcggcgg                                                                                                                                                              >  1:96375‑M2/162‑251 (MQ=255)                                                                                               ctaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAAt                                                                                                                                                   >  1:10029‑M2/151‑251 (MQ=255)                                                                                                    aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCAt                                                                                                                                              <  1:101970‑M2/106‑1 (MQ=255)                                                                                                           gataacgccttaaaaggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCAAtt                                                                                                                                       <  2:10029‑M2/113‑1 (MQ=255)                                                                                                                             gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCa                                                                                                                     <  1:212941‑M2/131‑1 (MQ=255)                                                                                                                                 aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCgg                                                                                                                 >  1:308465‑M2/117‑251 (MQ=255)                                                                                                                                           aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAacac                                                                                                       >  1:297964‑M2/107‑251 (MQ=255)                                                                                                                                                gctgagtcaaggcagttacgggagaaaaaaacggctcaaacaggaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCGAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTGCCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGTCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATcc                                                                                                  <  1:368107‑M2/150‑1 (MQ=255)                                                                                                                                                       caaggaatttacgggagaaaaactcggctcaaccatgaagaaatgaaatgcctgagtcagccgagaagaatttcaccgcttattcgcaccttccCTAACAACCACGGTCTGGTTGTGCCCGGCTCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCACACCCGCTGGCGATACGGCAGAGTCGACGAATGTCATGGCGATTTTAAATAACCCGGCGGGAGAGGGTCCTAACACGatccccaaccc                                                                                           >  2:261923‑M2/95‑247 (MQ=255)                                                                                                                                                                                         atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGACGAAGAATGTCATGGCGATTTTCAATAACCCGGCGGCAGCGGGTCCTAACACACACCCCACCCACACTGTGCTGCCCGAGTTACGCGCCGACCAAATg                                                         >  2:301050‑M2/61‑251 (MQ=255)                                                                                                                                                                                                              gtcagccgagaagaatttccccgcttattcgcaccttccCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAc                                    <  1:347469‑M2/212‑1 (MQ=255)                                                                                                                                                                                                                cagccgagaagaatttccccgcttattcgcaccttccCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCa                                  <  1:326399‑M2/214‑1 (MQ=255)                                                                                                                                                                                                                    cgagaagaatttccccgcttattcgcaccttccCTAACAACAACGGTCTGGTGGTGAGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCGTGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCAACAACACTGTGATGCACGAGTTAGGCGCCGACCAGATGGAGTGGGAAATGTTGGATGAACAGAc                               >  2:172899‑M2/34‑250 (MQ=255)                                                                                                                                                                                                                       gaagaatttccccgcttattcgcaccttccCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaa                            >  1:90501‑M2/31‑250 (MQ=255)                                                                                                                                                                                                                                     cttattcgcaccttccCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCttt             >  1:379788‑M2/17‑251 (MQ=255)                                                                                                                                                                                                                                                  tccCTAACAACCACGGTCTGGGGGTGCGCGGAGCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGTGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCggg  <  1:322491‑M2/246‑1 (MQ=255)                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      AAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATCAGGTCATACGCTTCGAGATACTTAACGCCAAACACCAGCGAAATGAGCGGCTTGCCGACGATCAACACCGCGAGCGCCACCAGAATACCGATTCCGCCCGCCAGTAAACCGGACTTCACACCTAACAACCACGGTCTGGTGGTGCGCGGATCTAAACGCATCACCTCTGGGTAAAAACTTTTACCCAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGG  >  NC_000913/3131225‑3131714

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.