Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,105,699 IS1 (+) +9 bp coding (286‑294/312 nt) ymdA → uncharacterized protein YmdA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 290634 =NA (NA)31 (1.060) 28/488 0.1 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 1105699 = 0 (0.000)coding (286/312 nt) ymdA uncharacterized protein YmdA
* ? NC_000913 = 291401NA (NA)12 (0.410) 12/488 1.0 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 1105707 0 (0.000)coding (294/312 nt) ymdA uncharacterized protein YmdA

TTGTTTTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGGGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCACCCAGTCATCACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAACGCGTATTCATGTTGTGCAGGGTGATATTACCAAACTGGCCGTTGATGTGATTGTGAATGCGGCTAATCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGC  >  NC_000913/1105453‑1105944
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     
ttgtttTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGGGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCACCCAGTCATCACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGt                                                                                                                                                                                                                                                   >  1:134425/1‑251 (MQ=255)
    ttgacggggggatatggatgccggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcatcacctgacacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttgtagtcattaccGCTGtaag                                                                                                                                                                                                                                                <  2:366333‑M2/8‑2 (MQ=255)
       acgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAAc                                                                                                                                                                                                                                            <  1:234526‑M2/12‑1 (MQ=255)
         ccTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGGGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCACCCAGTCATCACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATGCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCGCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGggtg                                                                                                                                                                                                                                           >  1:380942‑M2/1‑246 (MQ=255)
            gtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCg                                                                                                                                                                                                                                        >  1:73751‑M2/235‑250 (MQ=255)
                tatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAatat                                                                                                                                                                                                                                   >  1:2315‑M2/231‑251 (MQ=255)
                   ggatgactgatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAAc                                                                                                                                                                                                                                <  1:270251‑M2/24‑1 (MQ=255)
                      tgccggatggctggccgctgactgaatcccgcctgaagggaaagctgcaagtaatcagcaagcgatatatgcagcgaattgagcggcctaacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggcggagcagaatggcaaagacatggggacttatctgaacataaaacaatatcaataagatggagtcattaccGCTGTACTGAACATCGAATATAACTa                                                                                                                                                                                                                              >  2:20084‑M2/225‑250 (MQ=255)
                        acggatggcttgccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcatatcctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGt                                                                                                                                                                                                                           <  1:176773‑M2/29‑1 (MQ=255)
                          ggagggctggcagctgtatcaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGttt                                                                                                                                                                                                                         <  1:200242‑M2/31‑1 (MQ=255)
                                        tgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcctaacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACg                                                                                                                                                                                                           >  1:26628‑M2/207‑251 (MQ=255)
                                              aatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTg                                                                                                                                                                                                     <  1:12312‑M2/51‑1 (MQ=255)
                                                      ctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGaa                                                                                                                                                                                              >  1:19890‑M2/193‑250 (MQ=255)
                                                         aagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtaattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAAt                                                                                                                                                                                          >  1:19870‑M2/190‑251 (MQ=255)
                                                             aTGGCCAAATTGTGGAACCGGCATGTGACGTCAGCACCCAGTCATCACCCGTAGAAATGAACTGCCCACAGAATGGCTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt                                                                                                                                                                                      <  1:37507‑M2/251‑58 (MQ=255)
                                                                 ccAAATTGTGGAACCGGCATGTGACGTCAGCACCCAGTCATCACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct                                                                                                                                                                                  <  1:169906‑M2/251‑62 (MQ=255)
                                                                        gtaatcagcaagcgaaatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCaaa                                                                                                                                                                            >  1:306501‑M2/175‑250 (MQ=255)
                                                                         taatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgatgtcgttctcaaaatcggcggagccgcatgacaaagtcatcgggcattatctgaacataaaaaactatcaatcaggtggaatcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGACCAACTCAAGTTGATGAGCAAAAAAATGCACTTTAACCaaaa                                                                                                                                                                           >  2:114522‑M2/174‑250 (MQ=255)
                                                                               gcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCctgc                                                                                                                                                                    >  2:188392‑M2/168‑251 (MQ=255)
                                                                                      atatacgcagcgaattgagcggcataacctgcatctgaggcatcacctggcacggctgggacggaagtcgctgtcggtctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggattcattaccGCTGTAATGAACATCTAATATAACTAAGTTGCTGAACAACTCACGTGGCTGAGCAGAAAAATGCGATTTATCCAAAAAGCCTGCTGt                                                                                                                                                                 <  2:26628‑M2/87‑1 (MQ=255)
                                                                                         cGTCAGCACCCAGTCATCACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTCCTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc                                                                                                                                                          <  1:217262‑M2/251‑86 (MQ=255)
                                                                                           cgcagcgaagttagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcatgatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAg                                                                                                                                                        <  2:306885‑M2/96‑1 (MQ=255)
                                                                                                cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAAc                                                                                                                                                    >  1:41153‑M2/151‑250 (MQ=255)
                                                                                                     tgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACACCTCCCGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTGAAGAAACaagaa                                                                                                                                               <  1:113785‑M2/105‑1 (MQ=255)
                                                                                                     gTCATCACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCAAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGggggatgctgccaacttactgatatagtgtatgatggtgtttttgaggtgctccagtggcttcggtttctatcagctgtacctcctgttcagctact                                                                                                                                              <  1:358974‑M2/251‑98 (MQ=255)
                                                                                                                 cctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGc                                                                                                                                  <  1:11543‑M2/118‑1 (MQ=255)
                                                                                                                  ctgaatctgaggcagcacctggcacgactgagacggaagtagctgtcgttctcaaaatcagtggagcagcatgacaaagtcatcgggcattatttgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCTAATATAACTAAATTTCTTAACAACTCACGTTGCTAAGCAGAAAAATGCAATTTAACCAACAAGCCTGCTGGACACTTaagaaaccagaaggggaaaaggggcg                                                                                                                                 >  2:336490‑M2/133‑239 (MQ=255)
                                                                                                                    gcatctgaggcagcacctggcacggctgggacggacgtcgctgtcgttctcaaaatcggtggcgccgcatgacaaagtcatcgggcattatctgaacataacacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAACATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAAAAGGTGTAAGGAGGCGtt                                                                                                                               >  2:35922‑M2/131‑251 (MQ=255)
                                                                                                                    gaatctcaggcagcaccttgcacggctgggacgaaagtagctgtcgttctccaaatcggtggagcagcatgacaaagacatcgggcattatctgaacataaaacactatcaatcagttggagtcattaacGCTGTAATGCACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAGGCATGCTGTACACTTAAGAAACAAGAAGGTGAAAGGAGGCGtt                                                                                                                               >  2:244990‑M2/131‑251 (MQ=255)
                                                                                                                                 cacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAAc                                                                                                                       <  1:142179‑M2/129‑1 (MQ=255)
                                                                                                                                 cacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAAc                                                                                                                       >  2:142179‑M2/118‑246 (MQ=255)
                                                                                                                                     aTGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcactgc                                                                                                              <  1:7572‑M2/251‑130 (MQ=255)
                                                                                                                                          tCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGGAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcactgccgga                                                                                                          >  2:338327‑M2/1‑117 (MQ=255)
                                                                                                                                            tATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAACCGCGCAAATAGCCTCAGTAAATGTGCAGTATCTTAATAAACAGAAAAAGCTGGCTGTAATGggcgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagcggcttctgattctatcagctgtccctcctgttcagctcctgacggggaggcgcgtaacggcaaacgcactgccggccac                                                                                                       <  1:113899‑M2/251‑137 (MQ=255)
                                                                                                                                                ccGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGggtgatgctgccaacttactgatttagtgtatgagggtgtttttgaggtgctctagtggcttctgtttctatcagctgtccctcctgtgcagctactgacggggtggtgcgtaacggcaaaagctctgccgtacatcagc                                                                                                   >  2:197041‑M2/1‑111 (MQ=255)
                                                                                                                                                                    ttcaaaaacgggggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAACGCGTATTCATGTTGTGCAGGGTGATATTACCAAACTGGc                                                                                <  2:78061‑M2/168‑1 (MQ=255)
                                                                                                                                                                               tggagcagcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTAACGTTGCTGAGCAGAACAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACACGAAGGTGTAAGGAGGCGTTATGAAAACGCGTATTCATGTTGTGCAGGGTGATATTACCAACCTGGCCGTTGATGTGAt                                                                    >  1:218527‑M2/72‑251 (MQ=255)
                                                                                                                                                                                        atgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAACGCGTATTCATGTTGTGCAGGGTGATATTACCAAACTGGCCGTTGATGTGATTGTGAATGc                                                           <  1:343266‑M2/189‑1 (MQ=255)
                                                                                                                                                                                                gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCTGTAATGAACATCGAATATAACTAAGTGTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAACGCGTATTCATGTTGTGCAGGGTGATATTACCAAACTGGCCGTTGATGTGATTGTGAATGCGGCTAATc                                                   <  1:211881‑M2/197‑1 (MQ=255)
                                                                                                                                                                                                 aCGCGCAAATAGCCTAAGTAAAAGTGCTGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgggttggtgcttaacggcaaaagcactgccggacatcagcgctatctctgctctcactgccgtaaaacatggcagctgcagttcactta                                                  >  1:310120‑M2/1‑62 (MQ=255)
                                                                                                                                                                                                                  gTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcactgacggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccg                                 <  1:211843‑M2/251‑207 (MQ=255)
                                                                                                                                                                                                                                               cattaccGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAACGCGTATTCATGTTGTGCAGGGTGATATTACCAAACTGGCCGTTGATGTGATTGTGAATGCGGCTAATCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCa    <  1:189577‑M2/244‑1 (MQ=255)
                                                                                                                                                                                                                                                 ttaccGCTGTAATGCACATCGAATATAACTAAGTTTCTGAACAACACACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAACGCGTATTCATGTTGTGCAGGGTGATATTACCAAACTGGCCGTTGATGTGATTGTGAATGCGGCTAATCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGc  >  1:305078‑M2/6‑251 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     
TTGTTTTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGGGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCACCCAGTCATCACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTTAATGAGCGGCAATGTCAAAAACGCGCAAATAGCCTCAGTAAAAGTGCAGTATCTTGATAAACAGAAAAAGCTGGCTGTAATGAACATCGAATATAACTAAGTTTCTGAACAACTCACGTTGCTGAGCAGAAAAATGCGATTTAACCAAAAAGCCTGCTGTACACTTAAGAAACAAGAAGGTGTAAGGAGGCGTTATGAAAACGCGTATTCATGTTGTGCAGGGTGATATTACCAAACTGGCCGTTGATGTGATTGTGAATGCGGCTAATCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGC  >  NC_000913/1105453‑1105944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.