| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,586,576 | IS5 (–) +4 bp | intergenic (‑90/+241) | ydeP ← / ← ydeQ | putative oxidoreductase YdeP/putative fimbrial adhesin protein YdeQ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1396044 = | NA (NA) | 24 (0.820) | 24/488 | 0.2 | 95.9% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 1586576 = | 1 (0.030) | intergenic (‑90/+244) | ydeP/ydeQ | putative oxidoreductase YdeP/putative fimbrial adhesin protein YdeQ | |||||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 20 (0.690) | 19/486 | 0.5 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1586579 | 0 (0.000) | intergenic (‑93/+241) | ydeP/ydeQ | putative oxidoreductase YdeP/putative fimbrial adhesin protein YdeQ | |||||
TGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCA‑GCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGT > NC_000913/1396998‑1397474 | tgcagAAAAACGAGAAACAACTGGCGTGGTTAATCACGCTGGCCATTCGGTTTCGGTCAGACCAAAGGAGACGTCAGTGGGAGAGATCTCACTAAAATCTGGGGATAACGCCTTAAATGGCGAAGAAACGGGCTAAATAGTCTGATTAAAGGCATTTACGGGAGAAAAAAGCGGCTCAAACATGAATAAATGAAATGACTGAGTCAGCCGATAATAATCTCCCCTCTTAGTCGCTCCTGCACTAACTAAt < 2:142721/246‑1 (MQ=2) aCGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGGCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTg < 1:274023/251‑1 (MQ=25) aTAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGAtt < 1:226799/251‑1 (MQ=37) aaCCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGAAAACGCCTTAAATGGAGAAGAAACGGTCTAAATAGGATGATTAAAGGCATTTACGGGAGAAAAAATCGGCAAAAACATGAAGAAATGAAATGACTGAGTCAGCAGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGAGAGGTTTACag > 1:216611/1‑249 (MQ=14) cGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAAc < 1:10286/250‑1 (MQ=255) ttGATCCGTCAGTGGAAGAGATCTCACTATCAACTGGGGATAACGCCTTAAATGCCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCCAACATGAAGAAATGGAATGACTGAGACAGCCGAGAAGACTTTCCCCGCTTATTCGCACATTCCCTAACTAATCAATGCGTTGTTTGTAAATCCAGTTAAGAGTTGAGGTTTTCAGAGCAGCCAACGGTGAAATGtatt > 2:4016/2‑248 (MQ=17) gTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTAc < 1:157610/251‑1 (MQ=255) cACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACa < 1:231097/250‑1 (MQ=255) aCTGGGAATAACGCCTTATATAGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATAGGCTCAAACATGATGAGCTGGAATGACTGAGTCGGCCGAGAAGAAATTCCCCGCTTATTAGCACCTTCCCTAACTAATCAATGACTTGATTGTAACTCCAGCTCAGAGGTGAGATTTTCTGAGCAGACACCGTTGACATCTAGAGGTATTATTACGTTTAGTTAACCAGAAATTTg > 2:152990/1‑251 (MQ=9) cTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGt > 1:44489/1‑251 (MQ=255) aCGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAg < 1:250997/251‑1 (MQ=255) aGGCTGATTCAAGGCATTTACGGGAGAAAAAAGCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGt < 1:84372/251‑1 (MQ=255) cAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCA‑GCGaa > 1:222101/1‑249 (MQ=255) ggCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCA‑GCGAAAggg > 1:22277/1‑250 (MQ=255) aatgaaatgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCA‑GCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCattatt < 1:159281/251‑1 (MQ=255) atgaaatgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGAGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTCACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCA‑GCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTg > 1:209467/1‑251 (MQ=255) gaaatgaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCA‑GCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTgc < 1:310832/250‑1 (MQ=255) gaCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCA‑GCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGt < 1:4016/250‑1 (MQ=255) gaCTGAGTCAGCCGAAAAGAATTTCCCAGCTTATTCGCACCTTCCCGAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGGTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTTCGTTTAGTTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGTAGTCA‑GCTAAAGGGAAGAAAGTTCTCTTTTGTTTGGTGGCGGTTATCAATATGGCTGCGTc < 2:217646/251‑1 (MQ=255) agaagaCTTTCACCGCTTATTCGCCCCTTCCCTAACTAATCACTGCGTTGATTGTAAATCCAGCTACGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGAGAACAAGAAATTTGTCTGCACAAGGATTACATCATGCTTATGGCGAAACTGAA‑TCAAGCTCAAGGGAAGAAATTTCTCTTTGGTTTGATGGCGGTTTTATTTCTTGCGGCGTCGGTTGTTACTcggg > 2:259280/1‑249 (MQ=255) ccccGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCA‑GCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCGTcg < 1:119957/250‑1 (MQ=255) ttATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCA‑GCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGt > 1:107983/1‑251 (MQ=255) | TGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCA‑GCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGT > NC_000913/1396998‑1397474 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |