New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2558698	3 (0.120)	26 (1.050)	24/470	0.1	93.0%	intergenic (‑19/‑160)	eutB/intZ	ethanolamine ammonia‑lyase subunit alpha/putative phage integrase IntZ
	?	NC_000913	2565489 =	1 (0.040)					coding (1396/1404 nt)	eutA	ethanolamine ammonia‑lyase reactivase EutA

AGATCGGCAAAGGCAAGAAAGGTGACAAGCTGATAACTTTGCTTCCCAACTGGATTGATAAGCTGGGAGACGAATAAACCAGCCTTCAACCCCATCTCATCAATCAACGCCCGGCCCCGCTGCCGGGTTTTTGCTATGCACCACAATTACCCCAACCGGATACACAGCCGGATACAATTCCACCAGCACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTAC  >  NC_000913/2565256‑2565732                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                    cgcagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgctatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtc                                                                                                                                                                                                                                     >  1:69879‑M2/234‑250 (MQ=255)       cattttcataggcaatccccggattattgcggatgtcccttccgtccttttccgacaacccctgttttcccgccccgcgctcctgtgagcttgccgctgcgccgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtc                                                                                                                                                                                                                               <  1:17704‑M2/23‑1 (MQ=255)          cttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgcgcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagcccgcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttcactcaggaagGAAATGCGAGTGATTtcaacgtcaccg                                                                                                                                                                                                                           >  1:180441‑M2/225‑251 (MQ=255)               taggcaatcaccggattattgaggatgtcagctacggtcctttccaacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccaacacatcccccgaacgcagttcgttggcttcagccagcacctcttttacatccataaactgatctacattgccgaacaatgtggtctttagtttcctaagtctttccctcagcacgGAAATGCGAGTGATTTCACCGTCACCGGcac                                                                                                                                                                                                                       >  2:289758‑M2/220‑250 (MQ=255)                        accggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCg                                                                                                                                                                                                             >  1:200109‑M2/211‑251 (MQ=255)                             attattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgatcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCAACGTCACCGGCACAACCGATCCGCCaa                                                                                                                                                                                                         >  1:227677‑M2/206‑250 (MQ=255)                              ttattgcggatgtcagctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCaaa                                                                                                                                                                                                        >  2:135144‑M2/205‑250 (MQ=255)                                attgcagacgaccgctacggacatttccgacaacacctgctttgccgccacgcgctcatgtgagcttgccgctgcgacccccgccagcacataccccgaacgcagatcgttggctttagccagcacctcttttacatccttaaactgctataccttgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCCCCGGCACAACCGAACCGCAaaaa                                                                                                                                                                                                       >  2:142884‑M2/203‑249 (MQ=255)                                         gtccgctacggtcatttccgacaacacctgctttgccgccccgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttcgccagcacctcttttacatccttacactgatatacattgccgaacactgtggtctttagtttcatacgtcgttccctcaggaagGAAAAGCGAGTGATTTCACCGTCACCGGCATAACCGCTCCGCCAAAATGAGGCGTAcc                                                                                                                                                                                            >  2:209749‑M2/194‑251 (MQ=255)                                            cgctacggtcattcccaccaccccctccttggcccccccgcgctcctttgagcttgctgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAAt                                                                                                                                                                                         <  1:59611‑M2/61‑1 (MQ=255)                                                                                          tgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCCATGACTGcc                                                                                                                                           >  2:127947‑M2/145‑251 (MQ=255)                                                                                                    tcaatcaaCGCCCGGCCCCGCTGCAGGGTTTTTGCTATGCACCACAATTACCCCAACCGGATACACAGCCGGATACAATTCCACCAGCACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCCTTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGCGGCGTACCAATGTCGACATAGTCCCCCGCGCGGACAATCACTGAGTCCATGAATGCCAACGGGAgtt                                                                                                                                 >  2:157115/1‑251 (MQ=255)                                                                                                       gcgatactcccgccagcacagcccccgaacgcaggtcgttggtttgagacagcacctctttgacatccttaaactgatatacagtgccgaacaatggtgtctgtagtgtcataagtcgttccctcaggaagGAAAAGCGAGTGATTTCACCGTCTCCGGCACAACCGATCCGCCTAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGggagttttt                                                                                                                              <  2:261593‑M2/120‑4 (MQ=255)                                                                                                                    cagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGgcg                                                                                                                 >  1:23323‑M2/119‑251 (MQ=255)                                                                                                                             ccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGTCAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCCACAACAt                                                                                                        >  2:96495‑M2/110‑251 (MQ=255)                                                                                                                                  aacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAAAATgcccc                                                                                                   >  2:212938‑M2/105‑250 (MQ=255)                                                                                                                                              tggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCa                                                                                        <  1:283371‑M2/158‑1 (MQ=255)                                                                                                                                                gctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCaa                                                                                       >  1:48313‑M2/91‑249 (MQ=255)                                                                                                                                                     agccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTg                                                                                >  1:173108‑M2/86‑251 (MQ=255)                                                                                                                                                                            taaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGAt                                                         >  1:213917‑M2/63‑251 (MQ=255)                                                                                                                                                                                        cattgccgaacaatgtggtctttagtttcatacgtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATATCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGGAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAATCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGa                                              >  2:92585‑M2/51‑250 (MQ=255)                                                                                                                                                                                            gccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAAc                                          <  1:33884‑M2/204‑1 (MQ=255)                                                                                                                                                                                                 acaatggtgcttttattttcataagtcgttccctcaggaagGAAATGCGAGTGCTTTCACCGTCACCGGTACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCGGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCTcga                                    <  2:227677‑M2/210‑1 (MQ=255)                                                                                                                                                                                                   aatgtggtctttagtttcatacgtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAACAGAGGCGTACAAATGTCGATATAGTCCACCGAGCGGACAATAAATTCGTCAATGACTGCCAACCGGAGTTGGTGTAGCTGGGGGCGCAACAACATGACAAGAGCTTTACCAACGTCCTGCACGACCACCACCAGAAGGGGATGCGGATTGGGAAACCGCGcgacg                                  >  1:201593‑M2/40‑251 (MQ=255)                                                                                                                                                                                                      gtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGaaa                               <  1:135144‑M2/215‑1 (MQ=255)                                                                                                                                                                                                                     ataagtcgtgccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGTCACAACCTATCTGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCGCTTCGACAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTAACAAAGTCCTGCCCGGCCTCCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGTCTAAATCGAGCAACGCGtt                 <  2:294227‑M2/229‑1 (MQ=255)                                                                                                                                                                                                                       aagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATTGCGATATAGTCCCCCGCGCGGACAATCACTTCGGCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCTGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTtga               <  1:19894‑M2/231‑1 (MQ=255)                                                                                                                                                                                                                                   cAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTAc  >  1:92167/1‑251 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                    AGATCGGCAAAGGCAAGAAAGGTGACAAGCTGATAACTTTGCTTCCCAACTGGATTGATAAGCTGGGAGACGAATAAACCAGCCTTCAACCCCATCTCATCAATCAACGCCCGGCCCCGCTGCCGGGTTTTTGCTATGCACCACAATTACCCCAACCGGATACACAGCCGGATACAATTCCACCAGCACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTAC  >  NC_000913/2565256‑2565732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.