New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2558698	3 (0.120)	26 (1.050)	24/470	0.1	93.0%	intergenic (‑19/‑160)	eutB/intZ	ethanolamine ammonia‑lyase subunit alpha/putative phage integrase IntZ
	?	NC_000913	2565489 =	1 (0.040)					coding (1396/1404 nt)	eutA	ethanolamine ammonia‑lyase reactivase EutA

CGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGT‑CATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACC  >  NC_000913/2558466‑2558929                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                        cGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGT‑CATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGCTATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttc                                                                                                                                                                                                                        >  1:69879‑M1/1‑233 (MQ=255)       cattttcataGGCAATCCCCGGATTATTGCGGATGTCC‑CTTCCGTCCTTTTCCGACAACCCCTGTTTTCCCGCCCCGCGCTCCTGTGAGCTTGCCGCTGCGCCGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtc                                                                                                                                                                                                                  <  1:17704‑M1/246‑24 (MQ=255)          cTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGT‑CATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGCGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCCGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCACTCAGGAAGgaaatgcgagtgatttcaacgtcaccg                                                                                                                                                                                                              >  1:180441‑M1/1‑224 (MQ=255)               tAGGCAATCACCGGATTATTGAGGATGTCAGCTACGGT‑CCTTTCCAACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAACACATCCCCCGAACGCAGTTCGTTGGCTTCAGCCAGCACCTCTTTTACATCCATAAACTGATCTACATTGCCGAACAATGTGGTCTTTAGTTTCCTAAGTCTTTCCCTCAGCACGgaaatgcgagtgatttcaccgtcaccggcac                                                                                                                                                                                                          >  2:289758‑M1/1‑219 (MQ=255)                        aCCGGATTATTGCGGATGTCCGCTACGGT‑CATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccg                                                                                                                                                                                                >  1:200109‑M1/1‑210 (MQ=255)                             attattGCGGATGTCCGCTACGGT‑CATTTCCGACAACACCTGCTTTGCCGCCACGCGATCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaacgtcaccggcacaaccgatccgccaa                                                                                                                                                                                            >  1:227677‑M1/1‑205 (MQ=255)                              ttattGCGGATGTCAGCTACGGT‑CATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa                                                                                                                                                                                           >  2:135144‑M1/1‑204 (MQ=255)                                attgcagacgaccgctacgga‑catTTCCGACAACACCTGCTTTGCCGCCACGCGCTCATGTGAGCTTGCCGCTGCGACCCCCGCCAGCACATACCCCGAACGCAGATCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGCTATACCTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtccccggcacaaccgaaccgcaaaaa                                                                                                                                                                                          >  2:142884‑M1/12‑202 (MQ=255)                                         gTCCGCTACGGT‑CATTTCCGACAACACCTGCTTTGCCGCCCCGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTCGCCAGCACCTCTTTTACATCCTTACACTGATATACATTGCCGAACACTGTGGTCTTTAGTTTCATACGTCGTTCCCTCAGGAAGgaaaagcgagtgatttcaccgtcaccggcataaccgctccgccaaaatgaggcgtacc                                                                                                                                                                               >  2:209749‑M1/1‑193 (MQ=255)                                            cGCTACGGT‑CATTCCCACCACCCCCTCCTTGGCCCCCCCGCGCTCCTTTGAGCTTGCTGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaat                                                                                                                                                                            <  1:59611‑M1/251‑62 (MQ=255)                                                             gACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGcc                                                                                                                                                            >  2:8566/1‑251 (MQ=255)                                                                                           tgtgAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtccatgactgcc                                                                                                                              >  2:127947‑M1/1‑144 (MQ=255)                                                                                            gtgAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAAcg                                                                                                                             <  1:8566/251‑1 (MQ=255)                                                                                                 ggtcccgtgcggtcccccgccAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATCCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGcc                                                                                                                         <  2:48490/235‑1 (MQ=255)                                                                                                        gcgatactcccgccagcacagcCCCCGAACGCAGGTCGTTGGTTTGAGACAGCACCTCTTTGACATCCTTAAACTGATATACAGTGCCGAACAATGGTGTCTGTAGTGTCATAAGTCGTTCCCTCAGGAAGgaaaagcgagtgatttcaccgtctccggcacaaccgatccgcctaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttttt                                                                                                                 <  2:261593‑M1/243‑121 (MQ=255)                                                                                                                     cAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcg                                                                                                    >  1:23323‑M1/1‑118 (MQ=255)                                                                                                                              ccccGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggtcaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgccacaacat                                                                                           >  2:96495‑M1/1‑109 (MQ=255)                                                                                                                                   aaCGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaaaatgcccc                                                                                      >  2:212938‑M1/1‑104 (MQ=255)                                                                                                                                               tGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttacca                                                                           <  1:283371‑M1/250‑159 (MQ=255)                                                                                                                                                 gCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaa                                                                          >  1:48313‑M1/1‑90 (MQ=255)                                                                                                                                                      aGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctg                                                                   >  1:173108‑M1/1‑85 (MQ=255)                                                                                                                                                                             tAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggat                                            >  1:213917‑M1/1‑62 (MQ=255)                                                                                                                                                                                         cATTGCCGAACAATGTGGTCTTTAGTTTCATACGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatatcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttggagctgtgggcgcaacaacatgcccagagctttaccaaaatcctgcccggccaccaccagcaggggatgcggattcgga                                 >  2:92585‑M1/1‑50 (MQ=255)                                                                                                                                                                                             gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaac                             <  1:33884‑M1/250‑205 (MQ=255)                                                                                                                                                                                                  acaatggtgcttttattttcataagTCGTTCCCTCAGGAAGgaaatgcgagtgctttcaccgtcaccggtacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtccggcccggccaccaccagcaggggatgcggattcggaaaacgctcga                       <  2:227677‑M1/240‑211 (MQ=255)                                                                                                                                                                                                    aaTGTGGTCTTTAGTTTCATACGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaacagaggcgtacaaatgtcgatatagtccaccgagcggacaataaattcgtcaatgactgccaaccggagttggtgtagctgggggcgcaacaacatgacaagagctttaccaacgtcctgcacgaccaccaccagaaggggatgcggattgggaaaccgcgcgacg                     >  1:201593‑M1/1‑39 (MQ=255)                                                                                                                                                                                                       gtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaa                  <  1:135144‑M1/251‑216 (MQ=255)                                                                                                                                                                                                                      aTAAGTCGTGCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccgtcacaacctatctgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcgcttcgacaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaacaaagtcctgcccggcctccaccagcaggggatgcggattcggaaaacgcgcgtctaaatcgagcaacgcgtt    <  2:294227‑M1/250‑230 (MQ=255)                                                                                                                                                                                                                        aaGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaattgcgatatagtcccccgcgcggacaatcacttcggcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgccctgagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcgttga  <  1:19894‑M1/250‑232 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                        CGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGT‑CATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACC  >  NC_000913/2558466‑2558929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.