Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	3,560,081	IS1 (+) +9 bp	intergenic (+215/+533)	rtcR → / ← glpG	DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3560081 =	1 (0.040)	53 (1.830)	46/484	0.0	98.1%	intergenic (+215/+541)	rtcR/glpG	DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG
	?	NC_000913	= 3584195	NA (NA)					noncoding (768/768 nt)	IS1	repeat region
*	?	NC_000913	= 3560089	1 (0.040)	30 (1.040)	27/484	0.2	96.7%	intergenic (+223/+533)	rtcR/glpG	DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG
	?	NC_000913	3583428 =	NA (NA)					noncoding (1/768 nt)	IS1	repeat region

CGCTGTTTATCGATATCGGCACCACGCCGGAAGCGGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGGGATAAGCGGCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3560326‑3560081 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCC  <  NC_000913/3584195‑3583980                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGCTGTTTATCGATATCGGCACCACGCCGGAAGCGGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAA                                                                                                                                                                                                                     <  1:285439/251‑1  GCTGTTTATCGATATCGGCACCACGCCGGAAGCGGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGCTTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAAT                                                                                                                                                                                                                    >  2:274741/1‑251  GCTGTTTATCGATATCGGCACCACGCCGGAAGCGGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAAT                                                                                                                                                                                                                    <  1:28688/251‑1   cttTTTATCGATAACGGCACCACGCCGGAAGCGGTAGCACACGCACTGCTCAATCACAGCAATGTGCACAATGTCACCAAAAATATCAACGTTGCGAACACGTTGATGGTAAAAGAAGATTTTCGCAACATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCGCGATTGTAGCTCCCAGTTCCGCCATGATTACGGCATTCTGGAGATAAGCGGCAGCGGGTAA                                                                                                                                                                                                                     <  2:10613/246‑1     GTTTATCGATATCGGCACCACGCCGGAAGCGGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGAC                                                                                                                                                                                                                 >  1:227350/1‑251            GATATCGGCACCACGCAGGAAGCGGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACACTCTCAACGTTGCTAACCCGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGATGGCGAATTAAGCAGACGCGATGGCGGGCTCATTGGCGAAGCGACGCCCGGTTTTATTTCCCAGTTCCGCCTTGCTTTCGGCTTTCGGGGGCAAAGCGGAATCGGGTAATGctcccccct                                                                                                                                                                                                          >  2:186309/1‑242               ATCGGCACCACGCCGGAAGCGGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTAT                                                                                                                                                                                                       <  1:274741/251‑1                 ggtcaccccggCGGAAGCGGTAGCGCACGCACTGCTCAAGCACAGCAATTGGCGCATTGTCACCAACAATCTCAACGTTTCTAACACGTTGATGGTAAAAGAAGATTTGCGCATCATTCTCGCCGGTGGCGAATTGCGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCTGCATTCTGGAGATAAGCGGCATTGGGTAATGACTCCAACTTATTG                                                                                                                                                                                                     <  2:222976/240‑1                     acccCGCCGGAGGCGGTAGCGCACTCACCGGTCAATCACAGCAATGGGCGCCTTGTCACCAACAATCTCAACGTGGCTACCACGTTGATGGTAAAAGAAGATTCTCCCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCGCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCCACTTATTGATAG                                                                                                                                                                                                 <  2:261499/247‑1                     ACCACGCCGGAAGCGGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGAT                                                                                                                                                                                                   >  1:34359/1‑249                          GCCGGAAGCGGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTT                                                                                                                                                                                            <  1:114454/251‑1                                   GGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGCTGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCCACTTCTTGATAGTGTTTTATGTTC                                                                                                                                                                                     >  2:332010/1‑249                                   GGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAG                                                                                                                                                                                   <  1:49278/251‑1                                   GGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTC                                                                                                                                                                                     >  1:293851/1‑249                                   GGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTC                                                                                                                                                                                     >  1:205084/1‑249                                      AGCGCACGCACTGCGCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTGGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATGACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCTGTGTATTGATAGTGTGTTATGTTCAGAT                                                                                                                                                                                 <  1:110249/250‑1                                             GCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCG                                                                                                                                                                         <  1:37491/251‑1                                               atTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATATCAACGTTGCTAACACGTTGCTGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGGTTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGCGATAAGCGGCATAGGGTAATGCCTCCACCTTCTTGATAGAGTTTTATGTTCAGATGATTCCCGgt                                                                                                                                                                       >  2:288710/3‑249                                                  GCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATG                                                                                                                                                                      <  1:98332/249‑1                                                   cacaaacacatcaatttggaccTTGTCACCAACATTCCCACCGTGGCTAACACGTTGAGGGTAAAAGAAGATTTGCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACT                                                                                                                                                                   <  2:23847/229‑1                                                      AATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACCCGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGCTCATTGGCGACGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGCCTCCAACTTATTGATAGTGATTTCTGTTCAGATAATGCCCGATGACTTTG                                                                                                                                                                >  2:245481/1‑251                                                          ACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCAT                                                                                                                                                            <  1:291109/251‑1                                                           CAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATG                                                                                                                                                           >  1:172918/1‑251                                                               AATTTGCGCATTGTCACCAACAATCTCAACGTTGCGAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATT                                                                                                                                                                                                      <  1:343682/204‑1                                                                ATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGCGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGCTAATGCCCGATGACTTTGTCATGCAGCT                                                                                                                                                      >  1:9407/1‑251                                                                ATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCT                                                                                                                                                      >  1:78987/1‑251                                                                                  ACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACG                                                                                                                                    <  2:227350/251‑1                                                                                    AATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGAC                                                                                                                                  >  1:221570/1‑251                                                                                        TCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGCTTTTGAGAACGACAGCG                                                                                                                              >  1:229575/1‑251                                                                                                     CACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAG                                                                                                                 <  1:244051/251‑1                                                                                                              GGTAAAAGAAGATTTTCGCATCATTCTCTCCGGTGCCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGTAGCGACGCTCGATTTTATCTCCCATTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAGGCCCGATGACTTTGTCAGGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCA                                                                                                         <  1:324049/250‑1                                                                                                               GTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGG                                                                                                       >  1:178268/1‑251                                                                                                                          TTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGCTAGTGTTTTATGTTCAGCTAATGCCCGCTGTCTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCACCCGTGCCAGGTGCTGCCTC                                                                                              >  2:268390/1‑249                                                                                                                            TTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCGTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTGTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGA                                                                                           <  1:323006/250‑1                                                                                                                             cCGCATCATTCTGCCCGGTGGCGAATTACGCATCCGCGAGGGCGGGATCATTGGCGAAGTGACGCTCGATTTTAGCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCGCCACCGATTTTGAGAACGACATCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATT                                                                                         <  2:272281/250‑1                                                                                                                                 cacagTCTCGCCGGTGGGTAATTACGCAGCCGCGATGTCGGGCTCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCTGCATTCTGGAGATAAGCGGCATCGTGTAATGACTCCATCTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGAATTCCGTCCCAGCCGTGCCAGGTGCTGCATCAGATTCAGG                                                                                     <  2:113197/246‑1                                                                                                                                     TTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTCTTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTAT                                                                                 >  1:209217/1‑251                                                                                                                                         CGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCCCCGATTTTGAGAACGACAGCGCCTTC                                                                                                                         >  2:243752/1‑207                                                                                                                                         CGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCG                                                                             >  1:124146/1‑251                                                                                                                                         CGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTC                                                                                                                         <  1:243752/207‑1                                                                                                                                                   GAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGACTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGAAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGC                                                                   >  1:26636/1‑251                                                                                                                                                                         GGATCATTGGCGAAGCGACGCTCGAGTTTAGCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCGCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTA                                             <  1:79882/251‑1                                                                                                                                                                                 GGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTATGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGC                                     >  1:140466/1‑251                                                                                                                                                                                    GAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCATCTTT                                  >  2:14388/1‑251                                                                                                                                                                                        CGACGCTCAATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTGCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCT                              <  2:293851/251‑1                                                                                                                                                                                               CGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGTTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGC                        <  1:287960/250‑1                                                                                                                                                                                                  TTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCGGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGCTTACGTGCAGCTTTCCCTTCAGGCGGGg                    >  2:5790/1‑250                                                                                                                                                                                                    TTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGCTAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGATGATTACGTGCAGCTTTCCCTTCAGGCGGGATT                  >  1:326274/1‑251                                                                                                                                                                                                    TTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGAT                   <  1:245481/250‑1                                                                                                                                                                                                          CCCAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACA            <  1:5790/251‑1                                                                                                                                                                                                            CAGTTCCGCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGC          <  1:321175/251‑1                                                                                                                                                                                                                   GCCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGC   >  1:27246/1‑251                                                                                                                                                                                                                    CCTTGATTTCGGCATTCTGGAGATAAGCGGCATCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCC  <  1:14388/251‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGCTGTTTATCGATATCGGCACCACGCCGGAAGCGGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGGGATAAGCGGCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3560326‑3560081 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCC  <  NC_000913/3584195‑3583980

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.