New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 696506	24 (0.660)	3 (0.120)	3/334	2.9	17.0%	intergenic (‑2/+36)	glnX/glnV	tRNA‑Gln/tRNA‑Gln
	?	NC_000913	696619 =	13 (0.520)					intergenic (‑3/+45)	glnV/metU	tRNA‑Gln/tRNA‑Met
Rejected: Frequency below/above cutoff threshold.

CGACATTGAATGAACGCAGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGAT  >  NC_000913/696374‑696865                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       cGACATTGAATGAACGCAGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAAAAAATTg                                                                                                                                                                                                                                                   >  1:443581/1‑251 (MQ=255)      ttGAATGAACGCAGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGCACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGTTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTTCGAGGATTCGCACCCTGCAACGCCGGAATCAGATTCCGCTGCCTTACCTCTCGGCGATACACCAACaaaacgggttt                                                                                                                                                                                                                                              >  1:398581/1‑243 (MQ=37)       tgaatgaaCGCAGAAAAGCACAAAGCTCTCCGAAGCGAGCTTTTTTAATTTGGCGGGGGTACGAGGATTCGAACCTCGTAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACGTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGTCTTACCGCTTGGCGATACCCCAACAAATTGGtttt                                                                                                                                                                                                                                              <  1:242796/250‑1 (MQ=38)                      aaGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACata                                                                                                                                                                                                                              <  1:346847/251‑1 (MQ=255)                      aaGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGGTTTGAATTTGCCGTACat                                                                                                                                                                                                                               >  1:154097/1‑250 (MQ=255)                                          cGAGCTGTTTTAATGTGGCTTGGGTACGAGGATTCGAACCTCGGAATGACTGAACCAGATGCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAATCGTCGTGAATAAAGTGGCAGGGGTACGAGGATTCCAATCTCGGAATGCCTGAATCAGAATCCGGTGCCTTACCGCTTGGCGATTCCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTtg                                                                                                                                                                                                          <  1:282361/251‑1 (MQ=37)                                                      aTGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTacgacg                                                                                                                                                                                              >  1:52922/1‑251 (MQ=255)                                                                ggcagcgtcgcatccgacattgaaggataagacgtgtcaacatcgcattcgacattgaatgaacgcagaaaagcaaaaagctcgccgaagcgagcttttttaatgtggctggggtacgaggattcgaacctcggaatgccggaatcagaatccggtgccttaccgcttggcgataccccaacAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAAc                                                                                                                                                                                    >  1:191521‑M2/183‑251 (MQ=255)                                                                                      aaTGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGCTTTGAATTTGCCGAACATATTAGATACATTCAGAATTTGGTGGCTACGACGGGATACGAACCTGTGACCCCATCCTTATgggt                                                                                                                                                              >  1:263916/1‑248 (MQ=255)                                                                                        ggataagaccagtcaccgtcgcattagcaattgaatgaacgcagaatggctaaaagcccaacgtagggagcttttttaatgtggctggggtacgaggattcgaacctcggaatgccggaatcagaatccggtgccttaccgcttggcgataccccaacAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGa                                                                                                                                                            <  2:90978‑M2/93‑1 (MQ=255)                                                                                          ataagacgtgtcaacatcgcattcgacattgaatgaacgcagaaaagcaaaaagctcgccgaagcgagcttttttaatgtggctggggtacgaggattcgaacctcggaatgccggaatcagaatccggtgccttaccgcttggcgataccccaacAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAtg                                                                                                                                                          <  2:191521‑M2/95‑1 (MQ=255)                                                                                                   gAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAtgt                                                                                                                                                         <  1:316557/243‑1 (MQ=255)                                                                                                                                cccAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACACCAACAAATTgg                                                                                                                                                                                                                                                  <  1:376057/125‑1 (MQ=255)                                                                                                                                  cgaCTGGGTACACTTACAAGGTAAGCGTCTTGATTAAAGTGGCTGGGGTACGAGGATTCGATCCTCGGAATGCCTGAATCAGAATCCGGTTCCTTACCGCTTGGCGATTCCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTTACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTATCCAGATTGTttcttc                                                                                                                  <  2:151375/249‑1 (MQ=38)                                                                                                                                     cTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGAt                                                                                                               >  1:400776/1‑251 (MQ=255)                                                                                                                                      tGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCAAACTTATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTTTGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGGTTGTTTCTTCGATg                                                                                                              >  1:97742/1‑251 (MQ=255)                                                                                                                                                                           gCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGACTCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGAACCCATCATTATGAGGGATGGGCTCTACCCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGCATGCCGGtt                                                                         >  1:111969/1‑250 (MQ=255)                                                                                                                                                                             gtggttacgagtgttCGAACCTAGGAATGCCGGAAGCAGAATCCGGTGCCTTTCCGCGTGGCGATACCCCAACAAATTGGTTTTGACTTTGCCGAACATATTCGATACAGTCAGAATTTGGTGGCTACGACGGTAATCGAACCTGTGACCCCATCATTATGAGTGATGTTCTCTAACCAACTGAGCTACGTAGCCCGATTTTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATc                                                                       <  2:186396/238‑1 (MQ=37)                                                                                                                                                                                 gTACGAGGATTCGGACCTCGGCATGCAGGAAATAGAATCCGGTGCCTTACCGCTTGGCGCGACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTGGGTGGCTAAGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGAGGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTTGATTCGAACCAGGGAATGCCGGTATCaaaa                                                                   <  2:52922/251‑1 (MQ=38)                                                                                                                                                                                         aTTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAATTCAGCTCTGTCTTGGCAGAAACTATGCGATACATTCTGGATCTGGTGGCTACGTCGGGACTCGTACCTGAGACCGCATCATTATGTCTGATGAGCTCTAACCAACGGAGCTACGTAGCCCGATTGTTTCTTAGTTGGATCGAGAACCTGAATTTGAAACAGGGACTGCCGGTATCATAAACCgggtc                                                           >  2:386834/1‑248 (MQ=12)                                                                                                                                                                                                                   gAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATa                                  >  1:183040/1‑250 (MQ=255)                                                                                                                                                                                                                            gCCTTACCACTTGGCGATACCCTAACAAATTGGTTGTGAATTTGCCTAACATATTCGATACATTCAGAATTTGGTGGCTACGACGTGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTACGATGGATGGCGTCCCTCGATTCGAACCCGGGAATCCCCCTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGt                        <  2:183040/251‑1 (MQ=37)                                                                                                                                                                                                                                                  caacaaATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGGATTTTGGGGCTACGACGGGAGTCGAAACTGTGACCCCATCATTATGAGTGATGTGCTCTAACCCACGGAGCTAGGGGGCGAGATGGTTTGTTCGATGGCTTGGGTACCGTGATTCGAACCAGGGAATGGCGGGATCAAAAACCGGTGCCTTACCGGTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGAt  <  1:262457/251‑1 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       CGACATTGAATGAACGCAGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTTTAATGTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACTGGGTGCACTTACAAGGTAAGCGTCTTGAATAAATTGGCTGGGGTACGAGGATTCGAACCTCGGAATGCCGGAATCAGAATCCGGTGCCTTACCGCTTGGCGATACCCCAACAAATTGGTTTTGAATTTGCCGAACATATTCGATACATTCAGAATTTGGTGGCTACGACGGGATTCGAACCTGTGACCCCATCATTATGAGTGATGTGCTCTAACCAACTGAGCTACGTAGCCAGATTGTTTCTTCGATGGCTGGGGTACCTGGATTCGAACCAGGGAATGCCGGTATCAAAAACCGGTGCCTTACCGCTTGGCGATACCCCAATAACCGGGCGGTGAACCGCTTACTCGAAGAAGAT  >  NC_000913/696374‑696865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.