New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1979270	NA (NA)	65 (0.680)	59/494	0.6	100%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 4541023	0 (0.000)					coding (67/603 nt)	fimB	Type 1 fimbriae regulatory protein FimB

TAATTAACAGTTGCTACTCCATTTAAGTTCACTCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAAAGCAGCAAATACCGGGCCTCATGCAGCACGTAATTATTGTCTGACTTTGCTTTGTTTTATTCATGGTTTCCGGGCGAGTGAAATTTGTCGATTGAGGATTTCGGATATTGATCTTAAGGCAAAGTGTATATATATCCATCGATTAAAAAAAGGCTTTTCAACAACGCACCCGCTATTGAATAAAGAAGTTCAGGCTTTAAAAAACTGGTTGAGTATCCGTACTTCGTACCCGCATGCTGAGA  >  NC_000913/4540793‑4541266                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                    taATTAACAGTTGCTACTCCATTTAAGTTCACTCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGACTAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACACCTTAggtgatgctgccaacttact                                                                                                                                                                                                                                 <  2:589475‑M2/251‑21 (MQ=255)     tAACAGTTGCTACTCCATTTAAGTTCACTCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatt                                                                                                                                                                                                                             <  1:919746‑M2/251‑25 (MQ=255)       aCAGTTGCTACTCCATTTAAGTTCACTCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgattt                                                                                                                                                                                                                            <  1:501435‑M2/250‑26 (MQ=255)                                  cAGAAGAACTGGTCCACTTACGTTAGTTAATAAGCAAACGGTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc                                                                                                                                                                                                  >  1:384006‑M2/1‑198 (MQ=255)                                    gaagaaCTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcca                                                                                                                                                                                              >  1:993145‑M2/1‑196 (MQ=255)                                       gaaCTGGTCCACTTACGTTAGTTATTAAGCAAAAGTTCGCTTTTATCAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgctttagtgtatgatggtgtttttgaggtgctccagtg                                                                                                                                                                                           <  2:417606‑M2/251‑59 (MQ=255)                                               ccACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctg                                                                                                                                                                                    >  1:379225‑M2/1‑185 (MQ=255)                                                   ttACGTGAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGCTAAAAATGTTGGATTATTGCTAACCAAGCACAGCTAGAGAGCGTCTGTAATTGTAAGGGAAAAACGATGAAGACTAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgatgccaacttcctgatttagtgtaagatggagtttttgaggtgctccagtggcttctgattct                                                                                                                                                                               <  2:743424‑M2/251‑71 (MQ=255)                                                    tACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGGTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAAGCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc                                                                                                                                                                                >  2:716138‑M2/1‑180 (MQ=255)                                                     aCGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAACTGTTGGATTATTGCTAACCCCGAACAGCTAGTGCGCGTCTGTAATTATCAGGGAAAAACGATGAAGAATAAGGCTGATAAAAAACAATGAAACTTCCTGACCCATAGTGAAACCGAATCACTCCTTAggtgatgctgccaatttactgatttagtgaatggtggggttgttgatgtgttccagtggcttctgttgctat                                                                                                                                                                             <  1:590814‑M2/251‑73 (MQ=255)                                                              attaAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcc                                                                                                                                                                    <  1:292061‑M2/251‑82 (MQ=255)                                                              attaAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtc                                                                                                                                                                     >  2:967306‑M2/1‑170 (MQ=255)                                                                    cAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg                                                                                                                                                              <  1:615040‑M2/251‑88 (MQ=255)                                                                      aaCGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATACGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt                                                                                                                                                            <  2:201467‑M2/251‑90 (MQ=255)                                                                        cgatcgcTTGTATAAACATAATCAGGATAAAAATGTTGGATTATTGAGAACCCAGCATAGCTAGTGCGAGTATGTAATGAGAAGGGAAAAACGAATAAGAATAAGGCAGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgcaaacttactgaattagtgtatgatggtgtttttgaggtgcgccattggcttctgttgctatcagctggccctcctgttaa                                                                                                                                                          >  2:750597‑M2/4‑160 (MQ=255)                                                                            cGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagct                                                                                                                                                       >  2:740680‑M2/1‑156 (MQ=255)                                                                                   ataAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgg                                                                                                                                               <  1:841644‑M2/251‑103 (MQ=255)                                                                                                  aTAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacgg                                                                                                                                <  1:453540‑M2/251‑118 (MQ=255)                                                                                                         tGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagc                                                                                                                         <  1:867777‑M2/251‑125 (MQ=255)                                                                                                         tGTTGGATTATTGCTAACCCAGCACAGATAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTACTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttcgttttctatcagctgtccctcctgttccgctactgacgggggggtgcgtaacggcaaaagc                                                                                                                         <  2:648958‑M2/251‑125 (MQ=255)                                                                                                                  attGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATAATAAGGGAAAAACGATGAAAAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCCCGCCTTAggtgatgctgccaacttacggatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttcctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgga                                                                                                                >  2:737858‑M2/1‑118 (MQ=255)                                                                                                                     gCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacat                                                                                                             <  1:960878‑M2/251‑137 (MQ=255)                                                                                                                      cTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc                                                                                                            <  1:354148‑M2/251‑138 (MQ=255)                                                                                                                        aaCCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc                                                                                                            <  2:530161‑M2/249‑138 (MQ=255)                                                                                                                             aGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgct                                                                                                      <  1:116623‑M2/250‑144 (MQ=255)                                                                                                                                acaGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGCTGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatct                                                                                                  <  1:688183‑M2/251‑148 (MQ=255)                                                                                                                                        ggcgcgTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctc                                                                                          >  2:220944‑M2/2‑96 (MQ=255)                                                                                                                                          cgcgTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcac                                                                                        >  1:978808‑M2/1‑94 (MQ=255)                                                                                                                                                 gTAATTATAAGGGAAAAACGATGAAGAATAAGGCGGATACCAAAAAAAGGAACTTCCTGCCCCATAGTGAAATCGAATCTCTCCTTAggtgatgctgccaacttactgatttagtttatgatggtgtttgtgaggtgctccagtggcttctgtttctaccagctgtccctcctgttcagctactgacgtggtggtgcgtaacgtcaaaagcaccgccggacatcagcgctatctctgctctcactgccgta                                                                                 >  2:612657‑M2/1‑87 (MQ=255)                                                                                                                                                  tAATTATAAGGGAACAACGATGAAGAATACGGCTGATAACAACAACAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtc                                                                                 <  1:297070‑M2/250‑165 (MQ=255)                                                                                                                                                  tAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgta                                                                                 <  1:373476‑M2/250‑165 (MQ=255)                                                                                                                                                   aaTTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactggcgggggggggcgtaacggcaaaagcaccgccggacatcagcgctatctctgatctcactgccgtaa                                                                                <  2:233768‑M2/250‑166 (MQ=255)                                                                                                                                                       ataAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacat                                                                           <  1:3804‑M2/251‑171 (MQ=255)                                                                                                                                                       ataAGGGAAAAACAATGAAGAATAAGGCTGATAACAAAAAAATGAACTTCCTGTCCCAAAGTTAAATTGAAGCACTCCTTTggtgttgctgctatgttactgatttagtgtatgatggtgtttttgaggtgttccagtggcttcggtttctatcagctgtccctcctgttcagctactgacggggtggtgcttaacggcaaaagcaccgccggacatcagcgctatctcggctctcactgccgtaaaacat                                                                           >  2:836642‑M2/1‑81 (MQ=255)                                                                                                                                                         aaGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGGGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatgg                                                                         >  2:798865‑M2/1‑79 (MQ=255)                                                                                                                                                           gggAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggc                                                                        <  1:479687‑M2/250‑174 (MQ=255)                                                                                                                                                              aaaaaCGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaact                                                                    <  1:136785‑M2/251‑178 (MQ=255)                                                                                                                                                               aaaaCGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactg                                                                   <  1:591263‑M2/251‑179 (MQ=255)                                                                                                                                                                 aaCGATGAAGAAGAAGGCTAGTAACAAATAAAGGAACTTCCAGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggggctctagtggtttcggtttctaacagcggtccctccgtttcagctactgacggggtggtgcgtaacggcaaaagcaccgtcggacatcagcgctagctctgctctcactgccgtaaaacatggcaactgca                                                                 >  2:386031‑M2/1‑71 (MQ=255)                                                                                                                                                                   cGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgctttagtgtctgatggagtttttgagacgctccagaggcttctgtttctatcagctggccctcctgttcagctactgccggggtggtgcgtaacggacaacgcaccgacggacatcaacgctatctctgctctcactgccttaaaaactggccactgcagt                                                               <  2:725422‑M2/251‑183 (MQ=255)                                                                                                                                                                    gATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagtt                                                              <  1:56540‑M2/251‑184 (MQ=255)                                                                                                                                                                       gaagaaTAAGGCTGATAACAAAAAAAGGAACTTCCTGCCCCATAGTGAAATCGAATCACTCCTTAggtgattctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccaggggcttctgtttctatcagctgcccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttca                                                            >  2:539496‑M2/1‑65 (MQ=255)                                                                                                                                                                         agaaTAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgcccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcactt                                                         >  2:373476‑M2/1‑63 (MQ=255)                                                                                                                                                                          gaaTAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGCAATCGAATCACTACTTAggagatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttatgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacagcaaaagcaccgccggacatcagcgctatctctgctctcactgccgaaaaacagggcaactgcagttcaatac                                                        <  2:869824‑M2/251‑190 (MQ=255)                                                                                                                                                                            aTAAGGCTGATACCCAAAAAAGGACCTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggggatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacataagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttac                                                       <  1:601826‑M2/250‑191 (MQ=255)                                                                                                                                                                                  cTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgtcggggtgtttcgtaacggcaaaagcaccgccggacatcagctctatctctgctctcactgccgtaaaacatggcaacttcagttcacttacaccgctt                                                <  2:544144‑M2/251‑198 (MQ=255)                                                                                                                                                                                    gATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttc                                               >  1:589475‑M2/1‑52 (MQ=255)                                                                                                                                                                                         cAAAAAACGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgctgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactagcggggtggtgcgtaacggcaaaagcaacgccggacatcagcgctatctctgctctcactgccgtaaaacatgccaactgcagttcacttacaccgcttctccacc                                         <  2:120653‑M2/251‑205 (MQ=255)                                                                                                                                                                                         cAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacc                                         <  2:289621‑M2/251‑205 (MQ=255)                                                                                                                                                                                          aaaaaaaGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctacagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagagctatctctgctctcactgccgtaaaacatggcaactgaaattcacttaaaccgcttcctaaccc                                        <  2:625624‑M2/251‑206 (MQ=255)                                                                                                                                                                                           aaaaaaGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctataagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgttatctctgctctcactgccgtaaaacaaggcaactgcagttcacttacaccgcttctcaacccg                                       <  2:341367‑M2/251‑207 (MQ=255)                                                                                                                                                                                               aaGGAACTTCCTGACCCATAGTGAAATCGAATCACCCCTTAggtgatgctgccaacttactgatttagtgtatgatggtttttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtac                                   >  1:821945‑M2/1‑41 (MQ=255)                                                                                                                                                                                                    aCTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcacc                              >  1:289621‑M2/1‑36 (MQ=255)                                                                                                                                                                                                      ttCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcacc                              <  1:120347‑M2/249‑216 (MQ=255)                                                                                                                                                                                                       tCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgattctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccag                            >  1:513442‑M2/1‑33 (MQ=255)                                                                                                                                                                                                          tGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaa                         <  1:608860‑M2/250‑221 (MQ=255)                                                                                                                                                                                                            aCCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaccggccaaagcaccgccggaactcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaccccggtacgcgccagaaaatc                      <  2:673856‑M2/251‑224 (MQ=255)                                                                                                                                                                                                            aCCCATAGTGAAAACGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacctggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatc                      <  1:278382‑M2/251‑224 (MQ=255)                                                                                                                                                                                                                      aaaTCGAATCACTCCTTAggtgatgctgccaacttactgttttagtgtatggtggggtttttggggtgctccagtggcttctgtttctatcagctgtacctcctgttcagcaactgacggggtggttcgtaacggcaaaagcaccaccggacatcagcgctatctctactctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacacggtacgcaccagaaaatcattgatatgt            <  1:82954‑M2/251‑234 (MQ=255)                                                                                                                                                                                                                       aatcaaatcaCCCCTTGggtgatgctgccaacttcctgatttagtgtatgatggtgtttttgaggggctccagtggcttctgtttctatcagctgccccccctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggc           >  2:58694‑M2/1‑17 (MQ=255)                                                                                                                                                                                                                        aTCGGATCACTCCTTAggtgatgctgccaacttactgatttagtgaatgatggtgtttttgaggtgcaccagtggcttctgtttctatcagctgtccctcctgttcagctactgaaggggtggtgcgtaacggcaaaagcaccgcctgacatcagcgctatctctgctctcactgccgtaaaacatggcaactgccgttcacttaccccgcttctcaacccggtacgcaccagaaaatcattgaaattgcc          <  2:214666‑M2/251‑236 (MQ=255)                                                                                                                                                                                                                           gAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatg       <  1:312951‑M2/251‑239 (MQ=255)                                                                                                                                                                                                                             aTCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagaggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggccaaagcaccgccggacatcagcgctatctcttctctcactgccgtaaaacatggcaactgcagttcacttcccccgcttctcaacccggtacgcaccagcaaatcattgatcagaccatgat     <  1:503339‑M2/251‑241 (MQ=255)                                                                                                                                                                                                                                cctCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatgaatgg  >  1:530161‑M2/2‑8 (MQ=255)                                                                                                                                                                                                                                aCTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtgtcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacaccagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatgaatgg  >  1:233768‑M2/1‑8 (MQ=255)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                    TAATTAACAGTTGCTACTCCATTTAAGTTCACTCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAAAGCAGCAAATACCGGGCCTCATGCAGCACGTAATTATTGTCTGACTTTGCTTTGTTTTATTCATGGTTTCCGGGCGAGTGAAATTTGTCGATTGAGGATTTCGGATATTGATCTTAAGGCAAAGTGTATATATATCCATCGATTAAAAAAAGGCTTTTCAACAACGCACCCGCTATTGAATAAAGAAGTTCAGGCTTTAAAAAACTGGTTGAGTATCCGTACTTCGTACCCGCATGCTGAGA  >  NC_000913/4540793‑4541266

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.