New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1979270	NA (NA)	65 (0.680)	59/494	0.6	100%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 4541023	0 (0.000)					coding (67/603 nt)	fimB	Type 1 fimbriae regulatory protein FimB

CCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979028‑1979270 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTATAAAAGCGAACGTTTGCTTAATAACTAACGTAAGTGGACCAGTTCTTCTGAGTGAACTTAAATGGAGTAGCAACTGTTAATTA  <  NC_000913/4541023‑4540793                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGGTGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGACACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGT                                                                                                                                                                                                                                 >  1:233768/1‑251 CCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGg                                                                                                                                                                                                                                 >  1:530161/1‑250    atcatggtctgATCAATGATTTGCTGGTGCGTACCGGGTTGAGAAGCGGGGGAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGAAGAGATAGCGCTGATGTCCGGCGGTGCTTTGGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCTCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGAT                                                                                                                                                                                                                              <  1:503339/240‑1      CATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTC                                                                                                                                                                                                                            <  1:312951/251‑1         ggcaattTCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGGGTAAGTGAACGGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCAGGCGGTGCTTTTGCCGTTACGCACCACCCCTTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGTGCACCTCAAAAACACCATCATTCACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATCCGAT                                                                                                                                                                                                                         <  2:214666/244‑1          GCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGGGGGGCAGCTGATAGAAACAGAAGCCACTGGAGCCCCTCAAAAACACCATCATACACTAAATCAGGAAGTTGGCAGCATCACCCAAGGGGTGATTTGATT                                                                                                                                                                                                                        >  2:58694/1‑251           aCATATCAATGATTTTCTGGTGCGTACCGTGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGTAGAGATAGCGCTGATGTCCGGTGGTGCTTTTGCCGTTACGAACCACCCCGTCAGTTGCTGAACAGGAGGTACAGCTGATAGAAACAGAAGCCACTGGAGCACCCCAAAAACCCCACCATACACTAAAACAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTT                                                                                                                                                                                                                       <  1:82954/250‑1                     GATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCAGGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGTTTTCACTATGGGT                                                                                                                                                                                                             <  1:278382/251‑1                     GATTTTCTGGCGCGTACCGGGGTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGAGTTCCGGCGGTGCTTTGGCCGGTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGT                                                                                                                                                                                                             <  2:673856/251‑1                        TTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCA                                                                                                                                                                                                           <  1:608860/250‑1                           CTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGAATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGA                                                                                                                                                                                                        >  1:513442/1‑250                             GGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGT                                                                                                                                                                                                     >  1:289621/1‑251                             GGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAA                                                                                                                                                                                                       <  1:120347/249‑1                                  GTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAAAACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGGGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTT                                                                                                                                                                                                >  1:821945/1‑251                                      CGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCTTGTTTTACGGCAGTGAGAGCAGAGATAACGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTTATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTT                                                                                                                                                                                            <  2:341367/251‑1                                       gggttagGAAGCGGTTTAAGTGAATTTCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCTCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGTAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTT                                                                                                                                                                                           <  2:625624/244‑1                                        ggtgGAGAAGCGGTGTAAGTGAACTGCAGTTGGCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGTTGCTTTTGCCGTTACGCACCACCCCGCTAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCAGCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCGTTTTTTG                                                                                                                                                                                          <  2:120653/247‑1                                        GGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTG                                                                                                                                                                                          <  2:289621/251‑1                                              GAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATC                                                                                                                                                                                     >  1:589475/1‑250                                               AAGCGGTGTAAGTGAACTGAAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGAGCTGATGTCCGGCGGTGCTTTTGCCGTTACGAAACACCCCGACAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAG                                                                                                                                                                                   <  2:544144/251‑1                                                      GTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTTATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCCCCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGGTCCTTTTTTGGGTATCAGCCTTAT                                                                                                                                                                             <  1:601826/250‑1                                                       gtatTGAACTGCAGTTGCCCTGTTTTTCGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCTGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACATAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCTCCTAAGTAGTGATTCGATTGCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTC                                                                                                                                                                           <  2:869824/247‑1                                                        AAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGGCAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCT                                                                                                                                                                          >  2:373476/1‑251                                                           TGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGGCAGCTGATAGAAACAGAAGCCCCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGAATCACCTAAGGAGTGATTCGATTTCACTATGGGGCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTC                                                                                                                                                                        >  2:539496/1‑250                                                             AACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATC                                                                                                                                                                     <  1:56540/251‑1                                                              ACTGCAGTGGCCAGTTTTTAAGGCAGTGAGAGCAGAGATAGCGTTGATGTCCGTCGGTGCGTTGTCCGTTACGCACCACCCCGGCAGTAGCTGAACAGGAGGGCCAGCTGATAGAAACAGAAGCCTCTGGAGCGTCTCAAAAACTCCATCAGACACTAAAGCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCG                                                                                                                                                                    <  2:725422/251‑1                                                                TGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGCTAGCGCTGATGTCCGACGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAAACGGAGGGACCGCTGTTAGAAACCGAAACCACTAGAGCCCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCTGGAAGTTCCTTTATTTGTTACTAGCCTTCTTCTTCATCGTT                                                                                                                                                                  >  2:386031/1‑251                                                                  CAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTT                                                                                                                                                                <  1:591263/251‑1                                                                   AGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTT                                                                                                                                                               <  1:136785/251‑1                                                                       GCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCC                                                                                                                                                            <  1:479687/250‑1                                                                        CCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCCCTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTT                                                                                                                                                          >  2:798865/1‑251                                                                          ATGTTTTACGGCAGTGAGAGCCGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTAAGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACCGAAGCCACTGGAACACCTCAAAAACACCATCATACACTAAATCAGTAACATAGCAGCAACACCAAAGGAGTGCTTCAATTTAACTTTGGGACAGGAAGTTCATTTTTTTGTTATCAGCCTTATTCTTCATTGTTTTTCCCTTAT                                                                                                                                                        >  2:836642/1‑251                                                                          ATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTAT                                                                                                                                                        <  1:3804/251‑1                                                                               TTACGGCAGTGAGATCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCCCCCCCCCGCCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATT                                                                                                                                                    <  2:233768/250‑1                                                                                gACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTGTTGTTGTTATCAGCCGTATTCTTCATCGTTGTTCCCTTATAATTA                                                                                                                                                   <  1:297070/249‑1                                                                                TACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTA                                                                                                                                                   <  1:373476/250‑1                                                                                TACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGACGTTACGCACCACCACGTCAGTAGCTGAACAGGAGGGACAGCTGGTAGAAACAGAAGCCACTGGAGCACCTCACAAACACCATCATAAACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGAGATTCGATTTCACTATGGGGCAGGAAGTTCCTTTTTTTGGTATCCGCCTTATTCTTCATCGTTTTTCCCTTATAATTAC                                                                                                                                                  >  2:612657/1‑251                                                                                       GTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCG                                                                                                                                           >  1:978808/1‑251                                                                                         GAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCc                                                                                                                                         >  2:220944/1‑250                                                                                                 AGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCAGCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGT                                                                                                                                 <  1:688183/251‑1                                                                                                     AGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCT                                                                                                                              <  1:116623/250‑1                                                                                                           GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAG                                                                                                                       <  1:354148/251‑1                                                                                                           GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTT                                                                                                                         <  2:530161/249‑1                                                                                                            ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGC                                                                                                                      <  1:960878/251‑1                                                                                                               TCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGGAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCCGTAAGTTGGCAGCATCACCTAAGGCGGGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTTTTCATCGTTTTTCCCTTATTATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAAT                                                                                                                   >  2:737858/1‑251                                                                                                                        GCTTTTGCCGTTACGCACCCCCCCGTCAGTAGCGGAACAGGAGGGACAGCTGATAGAAAACGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGTAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTATCTGTGCTGGGTTAGCAATAATCCAACA                                                                                                          <  2:648958/251‑1                                                                                                                        GCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACA                                                                                                          <  1:867777/251‑1                                                                                                                               CCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTAT                                                                                                   <  1:453540/251‑1                                                                                                                                              CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTAT                                                                                    <  1:841644/251‑1                                                                                                                                                      AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTATAAAAGCG                                                                             >  2:740680/1‑250                                                                                                                                                         ttAACAGGAGGGCCAGCTGATAGCAACAGAAGCCAATGGCGCACCTCAAAAACACCATCATACACTAATTCAGTAAGTTTGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCTGCCTTATTCTTATTCGTTTTTCCCTTCTCATTACATACTCGCACTAGCTATGCTGGGTTCTCAATAATCCAACATTTTTATCCTGATTATGTTTATACAAGCGAtcg                                                                         >  2:750597/3‑248                                                                                                                                                           AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCGTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTATAAAAGCGAACGTT                                                                       <  2:201467/251‑1                                                                                                                                                             CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTATAAAAGCGAACGTTTG                                                                     <  1:615040/251‑1                                                                                                                                                                   GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTATAAAAGCGAACGTTTGCTTAAT                                                               <  1:292061/251‑1                                                                                                                                                                    GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTATAAAAGCGAACGTTTGCTTAAT                                                               >  2:967306/1‑250                                                                                                                                                                            ATAGCAACAGAAGCCACTGGAACACATCAACAACCCCACCATTCACTAAATCAGTAAATTGGCAGCATCACCTAAGGAGTGATTCGGTTTCACTATGGGTCAGGAAGTTTCATTGTTTTTTATCAGCCTTATTCTTCATCGTTTTTCCCTGATAATTACAGACGCGCACTAGCTGTTCGGGGTTAGCAATAATCCAACAGTTTTATCCTGATTATGTTTATAAAAGCGAACGTTTGCTTAATAACTAACGT                                                      <  1:590814/251‑1                                                                                                                                                                              AGAATCAGAAGCCACTGGAGCACCTCAAAAACTCCATCTTACACTAAATCAGGAAGTTGGCATCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTAGTCTTCATCGTTTTTCCCTTACAATTACAGACGCTCTCTAGCTGTGCTTGGTTAGCAATAATCCAACATTTTTAGCCTGATTATGTTTATAAAAGCGAACGTTTGCTTAATAACTCACGTAA                                                    <  2:743424/251‑1                                                                                                                                                                               GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGCTTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCACCATTTTTATCCTGATTATGTTTATAAAAGCGAACGTTTGCTTAATAACTAACGTA                                                     >  2:716138/1‑249                                                                                                                                                                                   CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTATAAAAGCGAACGTTTGCTTAATAACTAACGTAAGTGG                                                >  1:379225/1‑250                                                                                                                                                                                          CACTGGAGCACCTCAAAAACACCATCATACACTAAAGCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTGATAAAAGCGAACTTTTGCTTAATAACTAACGTAAGTGGACCAGTTC                                        <  2:417606/251‑1                                                                                                                                                                                             TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTATAAAAGCGAACGTTTGCTTAATAACTAACGTAAGTGGACCAGTTCTTC                                     >  1:993145/1‑251                                                                                                                                                                                                 GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTATAAAAGCGACCGTTTGCTTATTAACTAACGTAAGTGGACCAGTTCTTCTG                                   >  1:384006/1‑249                                                                                                                                                                                                                           AAATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTATAAAAGCGAACGTTTGCTTAATAACTAACGTAAGTGGACCAGTTCTTCTGAGTGAACTTAAATGGAGTAGCAACTGT        <  1:501435/250‑1                                                                                                                                                                                                                            AATCAGTAAGTTGGCAGCATCACCTAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTATAAAAGCGAACGTTTGCTTAATAACTAACGTAAGTGGACCAGTTCTTCTGAGTGAACTTAAATGGAGTAGCAACTGTTA      <  1:919746/251‑1                                                                                                                                                                                                                                AGTAAGTTGGCAGCATCACCTAAGGTGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTAGTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTATAAAAGCGAACGTTTGCTTAATAACTAACGTAAGTGGACCAGTTCTTCTGAGTGAACTTAAATGGAGTAGCAACTGTTAATTA  <  2:589475/251‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979028‑1979270 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAGGAGTGATTCGATTTCACTATGGGTCAGGAAGTTCCTTTTTTTGTTATCAGCCTTATTCTTCATCGTTTTTCCCTTATAATTACAGACGCGCACTAGCTGTGCTGGGTTAGCAATAATCCAACATTTTTATCCTGATTATGTTTATAAAAGCGAACGTTTGCTTAATAACTAACGTAAGTGGACCAGTTCTTCTGAGTGAACTTAAATGGAGTAGCAACTGTTAATTA  <  NC_000913/4541023‑4540793

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.