| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,542,042 | IS1 (+) +8 bp | coding (6‑13/597 nt) | fimE → | regulator for fimA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3583428 = | NA (NA) | 5 (0.080) | 5/478 | 4.7 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 4542049 | 0 (0.000) | coding (13/597 nt) | fimE | regulator for fimA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| * | ? | NC_000913 | = 3584195 | NA (NA) | 82 (1.250) | 72/480 | 0.1 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 4542042 = | 0 (0.000) | coding (6/597 nt) | fimE | regulator for fimA | |||||
CAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGAC > NC_000913/4541809‑4542296 | tgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcagaatcggtggaactgcagtaaaacgtcatcgggcattatctgaacataaaacactatcaataagttggagtcatttacTAAACGACGTTATCATAc > 2:659762‑M2/234‑251 (MQ=255) gatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagcggcacgtaatcagcaagcgatatacgcagcgaagtgagcggcataacctgaagctgaggccgcacctggcacggctggtacggaagtcgctggcgttctcaaaatcgttggagctgcatgacaaagtcatcgtgcattatctgaacataaaacactatcaataagttggagacattaccTAAACGTCGTTATCTTAcc < 2:93557‑M2/19‑1 (MQ=255) gatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTaccggaaa > 2:114548‑M2/227‑247 (MQ=255) ggatggctggccgctgtatgaataccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtctttctcaacatcggtggcgctgcatgccaaagccatcgggcattatctgaacataaaacactctcaataagttggagtcattaccTAAACGTAGTTATCTTACCGGTAAAGGAGtt > 2:618259‑M2/221‑251 (MQ=255) cgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCatgat > 1:571873‑M2/210‑251 (MQ=255) tgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGc > 1:201590‑M2/207‑250 (MQ=255) gtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAg < 1:75486‑M2/46‑1 (MQ=255) atgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttatcaaaagcggtggatctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataatttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGc < 1:68005‑M2/48‑1 (MQ=255) gaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCg‑g < 2:450944‑M2/50‑1 (MQ=255) cccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTg > 1:354333‑M2/198‑251 (MQ=255) gcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTgttt > 1:45085‑M2/195‑250 (MQ=255) gggaaagctgcacgtaatcagcaagcgatatacgcagagaattgagcggcctaacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCAGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTAcgggga > 2:452359‑M2/188‑249 (MQ=255) agctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggattcattaccTAAACGTCGTTATCTTACCGGTAAAGAATTTCAGGCCATGATGCAGGCG‑GTTTGGTACGGGGCAAAggg > 1:369515‑M2/183‑251 (MQ=255) gctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGGAAcgggg > 1:317692‑M2/182‑250 (MQ=255) cacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAgccc > 1:237335‑M2/178‑250 (MQ=255) cgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacgtaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcagcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCa‑ga < 1:41727‑M2/76‑1 (MQ=255) cgtaatcagcaagcgatatacgcagcgaattgagcggcataaccggaatctgaggcagcacctggcccggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCa‑ga < 2:692517‑M2/76‑1 (MQ=255) cgtaatcagcaagcgatatacgcagcgaattgagcggcataaccggaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCa‑ga < 2:279843‑M2/76‑1 (MQ=255) aagcgatatacgcagcgaattgagcggcataacctgaatctgaagcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GG‑GATTTTTgtt > 1:610422‑M2/166‑250 (MQ=255) gatatacgcagcgaattgagcggcataacctgaatctgaggcagcaccttgcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTAt < 1:683661‑M2/90‑1 (MQ=255) atatacgcagcgaatttagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGGAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTAtt < 2:451415‑M2/91‑1 (MQ=255) cgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGtt < 1:26326‑M2/96‑1 (MQ=255) gcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTg < 1:114548‑M2/97‑1 (MQ=255) gcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTAAGGGGGAACGGGGGCCA‑AA‑GGTTATTGTCTTTTTCTGTTg > 1:275461‑M2/155‑251 (MQ=255) aattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGGTACGGGGCAACGGGAGCCA‑GA‑GATTATTTTCTTATTCTGTTGGCatat > 1:549814‑M2/149‑251 (MQ=255) tgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCg < 2:549814‑M2/105‑1 (MQ=255) acataacctgaatctgaggcagcacctggcacggctgggtcggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaaggcatcgggcattatctgaacataaaacactatcaataagatggcgtcattaccTAACCGTAGTTATCTTACCGGTAAAGAAGTTCCGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAAAGGGAGCAC‑GA‑GGTTTTtggtttattctgttgggcactcggcctggg > 2:233203‑M2/140‑237 (MQ=255) cataaccggaatctgaggtagcacctggcacggctgggacggaatgcgttgtcgttctcaaaatcggtggagctgcatgacaaagtcagcgtgcattatctgaacataaaactctatcaataaggtggagtcattaccTAAACGGCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATAGCGGCATG‑GGa < 2:547054‑M2/113‑1 (MQ=255) cctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTTTGTTGGCATATCGGCATG‑GGATGcgg > 1:3213‑M2/134‑250 (MQ=255) cctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGGCTTATTCTTTTGGCATATTGGCATG‑GGATGCGt > 1:511154‑M2/134‑251 (MQ=255) ccgaaacttatgcagcaccttgcacggctgggactgaagtcgctttcgttctcaaaatcgtaggagctgcatgacaaagtcatctgtctttatctgaacataaaacactatcaataagttggatgcattaccTAGACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATTATGCAGGCG‑GTTTGTTACGGGGCATCGGGATCCA‑GA‑GATTATTGTCTTATGCTGTTGGCATAGCGGCATG‑GGATGCGT‑a < 2:76313‑M2/119‑1 (MQ=255) gaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaaggcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGGAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑At < 2:201432‑M2/120‑1 (MQ=255) atctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGGAACGGGGGCCA‑GA‑GATTATTTTCTTTTTTTTtttgcatataggcattgggggagtgattg > 2:178427‑M2/129‑237 (MQ=255) tctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGgcg‑gtttgtttaggggga > 1:289140‑M2/128‑183 (MQ=255) tctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCa < 2:289140‑M2/64‑1 (MQ=255) gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTACACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTTCGGGGCCACGGGGGCCATGA‑‑TTTATTgtcttattctgttggcctatcgtactggggtgagtatctgtgc > 1:691676‑M2/125‑229 (MQ=255) gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCATGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAg < 1:257683‑M2/123‑1 (MQ=255) gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGt < 1:440155‑M2/124‑1 (MQ=255) ggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACt < 2:137117‑M2/129‑1 (MQ=255) ggcagcacctggcacggctgggacggaaggcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACt < 2:237335‑M2/129‑1 (MQ=255) cctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGGTGCGT‑ATTAGTGAACTGCTTGAt > 1:373922‑M2/116‑251 (MQ=255) ggcccggctgggacggaagtcgctggcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaaaaagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAGCGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCt < 2:615520‑M2/138‑1 (MQ=255) gcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGG‑ATTAGTGAACTGCTTGGTCTGc > 1:132806‑M2/112‑251 (MQ=255) ggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTTTTACGGGGCAACGGGGGCCC‑GAGGATT‑TTGTCTTATTCTTTTGGCATATCGGCATGTGGCT‑CGT‑ATTTGTGGCCTGCTTGATTTGCattt > 1:533825‑M2/108‑250 (MQ=255) ggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTa < 1:232361‑M2/144‑1 (MQ=255) gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTAt < 1:322716‑M2/145‑1 (MQ=255) gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTAt < 1:154913‑M2/145‑1 (MQ=255) gggacggaaggcggtgtcgttctcaaaatcggttgagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCa < 2:602788‑M2/147‑1 (MQ=255) cggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTGACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGGTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGgacc < 1:356433‑M2/152‑1 (MQ=255) ggaagtcgctgtcgttatcaaaatcggtggagctgaatgacaaggtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTTCGGGGGAACGGGGGCCA‑GA‑GATTATTGTCTTATTCTGTTGGGATAACGGCCTG‑GGATGGGTAATAAGGGAA‑TGCTTGATCTGCCATATCAGgacct > 2:349997‑M2/99‑251 (MQ=255) aagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGgaccttg < 2:571873‑M2/155‑1 (MQ=255) ggcgctgtcgtgctcaaaaacggtggagctgcaggacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGgaccttgac < 2:121146‑M2/157‑1 (MQ=255) tcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCa < 2:421698‑M2/64‑1 (MQ=255) tcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCa > 1:421698‑M2/94‑157 (MQ=255) gctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGgaccttgacctt < 1:287168‑M2/160‑1 (MQ=255) gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGa > 1:21167‑M2/86‑250 (MQ=255) caaaatcggttgagctgcatggaaaagtcatcgggcattatctgaacataaaacgatatcaataaggtggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAg < 2:508579‑M2/171‑1 (MQ=255) aaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATg‑gg > 1:564704‑M2/79‑190 (MQ=255) aaatcggtggagctgcatgacaaaggcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATg‑gg < 2:564704‑M2/112‑1 (MQ=255) cggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTTTTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCAtt > 1:408793‑M2/75‑217 (MQ=255) agctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGGAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCg < 2:275461‑M2/183‑1 (MQ=255) ctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCa > 2:239349‑M2/67‑104 (MQ=255) ctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCa < 1:239349‑M2/38‑1 (MQ=255) gacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCC‑GA‑GATTAATGACTTAATCTGTTGGCATATCGGGCTG‑GGATGCGA‑ATTAGTGAACTGCTTGATTTGCATTATCCCAGCCTTTACCTTTATTCAGGTAGAATAAATATTTGCCTACTg > 2:43301‑M2/61‑250 (MQ=255) gacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTg < 2:317692‑M2/190‑1 (MQ=255) aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGGTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTgaaga < 2:373922‑M2/194‑1 (MQ=255) aagtcatcgggcattatctgaacataaaacactagcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGTCG‑GTTTGTTGCGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTgaagaa < 2:173430‑M2/195‑1 (MQ=255) gcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCt > 1:399342‑M2/47‑139 (MQ=255) gcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGGAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCt < 2:399342‑M2/93‑1 (MQ=255) atctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTTTTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGCACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGt > 1:681354‑M2/42‑251 (MQ=255) ctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTTCCGTTc > 1:614702‑M2/40‑251 (MQ=255) tgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCg > 1:395119‑M2/39‑58 (MQ=255) tgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTTTTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCCGGACCTTGAACTTAATGAAGGTAGAATAAATAATCGCCCACTGAAGTACGGATTTTCTAACGTtcc > 1:663885‑M2/39‑250 (MQ=255) ataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCAGCATG‑GGGTGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGGAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGt > 1:47531‑M2/34‑251 (MQ=255) acactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGt < 1:43301‑M2/223‑1 (MQ=255) actatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTTAAGAACGGATTTTCTACCGTTCACCCGTTACGttt > 1:527917‑M2/27‑251 (MQ=255) ataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTTTTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTtgatg > 1:1450‑M2/20‑249 (MQ=255) agttggagtcatttccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGt < 2:21167‑M2/235‑1 (MQ=255) tggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GC‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGa > 1:75559‑M2/14‑250 (MQ=255) gagtcattaccTAAACGGCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGc < 1:459961‑M2/240‑1 (MQ=255) agtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTTTCTTATTCTGTTGGCATATCGGCCTG‑GGGTGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTTATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCCCCCGTTACGTTTTGATGAGCGTGAAGcc > 1:212983‑M2/11‑251 (MQ=255) cattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACGGCTTGATCTGCATTGTCAGGACCTTGTCCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGCCCTCCTTTTCTTCCTTTCTCCCTTTTCGTTTTTATGAGCGTGAAGCCgtt < 1:444003‑M2/244‑2 (MQ=255) attacctAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGAAACGGGGGCCA‑GA‑GGTTATTTTCTTTTTTTGTTGGCATATCGGCCTG‑GGATGCGT‑ATTAGGGGACTGCTTGATCTGCCTTATCAGGAACTTGAACTTAATGAAAGTAGAATAAAAATTCGCCGACTGAAGAACGGGTTTTCTTCCGGTCACCCGTTACGGTTTGATTGGCGGGAAGCCgggg > 1:333158/7‑248 (MQ=255) tAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTTTTACCGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTTGCATATCCGCAGG‑GGGTGCGG‑ATTAGTGAACTGCTTGATTTGTCTTATCAGGACCTTGTCCTTAATGAAGGTAGAATAAATATTCGCCCACTTGAGAAAGGATTTTTTACCGTTCCCCCGTTACGATTTGATTAGGGTGGCGCCGTGGAACGCt > 2:149837/1‑251 (MQ=255) aatcatcgtTTTCTGACCGTTAAAGAAGTTCAGGCCATGATGCCGGCGTGTTT‑TTACGGGGCAACGGGAGCCA‑GA‑TATCATTGTCTGATTCTGTTGGTATATCGGCATG‑GGAGGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCATGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTg < 2:390102/246‑1 (MQ=255) aaCGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTgg < 1:378500/251‑1 (MQ=255) cgtcgtTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGAc > 1:581427/1‑251 (MQ=255) | CAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCG‑GTTTGTTACGGGGCAACGGGAGCCA‑GA‑GATTATTGTCTTATTCTGTTGGCATATCGGCATG‑GGATGCGT‑ATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGAC > NC_000913/4541809‑4542296 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |