Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	3,546,574	IS2 (+) +5 bp	coding (16‑20/1317 nt)	gntT →	high‑affinity gluconate transporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2996361 =	NA (NA)	59 (0.900)	49/480	0.3	95.1%	noncoding (1331/1331 nt)	IS2	repeat region
	?	NC_000913	3546574 =	3 (0.050)					coding (16/1317 nt)	gntT	high‑affinity gluconate transporter
*	?	NC_000913	3186096 =	NA (NA)	54 (0.830)	51/476	0.3	94.6%	noncoding (1/1331 nt)	IS2	repeat region
	?	NC_000913	= 3546578	3 (0.050)					coding (20/1317 nt)	gntT	high‑affinity gluconate transporter

AATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCA  >  NC_000913/3185852‑3186341                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      aaTACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGTTTAAAAATATTTATTGTTAATTATCCGTTATTAGACTg                                                                                                                                                                                                                                                 >  2:510158/1‑251 (MQ=255)                 aGGAACTGAATTTAAAAGCTCGGATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATGGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCACCCTGAATCTcc                                                                                                                                                                                                                                  >  1:495049/1‑250 (MQ=255)                             tCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAata                                                                                                                                                                                                                      <  1:581271/250‑1 (MQ=255)                                 cgCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACt                                                                                                                                                                                                                 >  2:197880/2‑251 (MQ=255)                                        aTGGAATCCCCAAGCAAAGCTGCCACCCCAGGCAACGTGTACGCTCAGGCTGACTACAAGATTGCTTATGAGTAATCGCATTGGGCCGGGTTCGCCCTGCCACAACATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACTATAAGCGAATTGATTAAGAATATTTATTGTTAATTATCCGCTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACGTAAATaa                                                                                                                                                                                                          <  2:584475/251‑1 (MQ=255)                                              cccccAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGATTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAACTTAAAATTAACCACAATAAGAGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGCCAACCAATATCACTTAAATAAGTGaa                                                                                                                                                                                                     >  2:197043/2‑249 (MQ=255)                                                  cAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCt                                                                                                                                                                                                <  1:502998/251‑1 (MQ=255)                                                      caaagagtcctccccGGGCAACGTTTCCGCCCAGGCTGACTACAAGACTGTCTACGAGTAATCGCATTTGGCCGGGTTCGCACTGTCACATCATAAACGGATTCATGATAATTGGATCAGATGTATAAAAAATTAAAATTAACCTCAATAATCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTAGTAGACTGGCCCACTGTTTCTCCAGACAACCAATATCACTTAAATAAGTGTTAGGCTTaag                                                                                                                                                                                            <  2:515512/240‑2 (MQ=255)                                                                  cccGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAg                                                                                                                                                                                <  1:385179/251‑1 (MQ=255)                                                                  cccGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTAATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAg                                                                                                                                                                                <  2:372977/251‑1 (MQ=255)                                                                                                cAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATTCTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGt                                                                                                                                                  <  1:600522/251‑1 (MQ=255)                                                                                                           aCGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGATAAACAGATGATTGTTGTCTTAGGGCCgg                                                                                                                                       >  1:389911/1‑251 (MQ=255)                                                                                                                tAATCGCATTTGGCCGTGTTCGCCCGGCCACATCATTTACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGAGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTAATTGGAGAACAGATGATTAATGTCTTATGGCCGgagca                                                                                                                                   >  2:456988/1‑248 (MQ=37)                                                                                                                tAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGCTGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTAATTATCCGTTATTAGACTGGCCCCCTGCATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGACCAGATGATTGCTGTCTTAGGGCCGGAGaa                                                                                                                                   >  2:577101/1‑250 (MQ=255)                                                                                                                                     gCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAg                                                                                                             <  1:511066/251‑1 (MQ=255)                                                                                                                                      cccGGTCACATCAATAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATAGCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGTAGAAACGCAGCCGGCGTACCACACAgg                                                                                                            <  2:698782/251‑1 (MQ=255)                                                                                                                                         ggCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGaa                                                                                                          >  1:174530/1‑250 (MQ=255)                                                                                                                                                     aaCGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAAtt                                                                                              <  1:510158/250‑1 (MQ=255)                                                                                                                                                       cGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGtt                                                                                           <  1:19918/251‑1 (MQ=255)                                                                                                                                                        ggATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTc                                                                                          <  1:177978/251‑1 (MQ=255)                                                                                                                                                        ggATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTc                                                                                          >  1:530280/1‑251 (MQ=255)                                                                                                                                                             aaTGATAAGTGGAACAGGTGTATAAAAAATTAAAAGTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATGATCCGTTAGTAGACTGGTCCTCTTAAACTCCAGACAATCAATCTCCCTTAAATAAGTTATAGTCTTAATACTAGTTTTGAGACGATTCATTGGAGCACAGAAGATTGATGTATTAGGTCCGTATAAACGTAGACTGCGTACCACTAAGGAACTGTTCGCAAGTTTTcagcag                                                                                     <  2:467057/251‑1 (MQ=255)                                                                                                                                                                gATAAGTGGATCAGATGTATAAAAAATTAAAATTAACAACAATAAGCGAATTGATTAAAAATATTTATTGTTAATTATCCGTTATTAGACTGGACCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACAACACAGGAAAAGATCGCAATTGTTcagaag                                                                                     >  2:314199/1‑245 (MQ=255)                                                                                                                                                                  tAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGATATTAGACTGGCCCCCTGAATCTCAAGACAACCAATATCTATTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAAAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTCCAACACAGGAACAGATCGCAATTGTTAAGCAGAGCtt                                                                                >  2:565416/1‑251 (MQ=18)                                                                                                                                                                    aGTGGATCAGATGTATAAAAAAATAAAATTAACCACAATAATCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTg                                                                              <  2:510490/251‑1 (MQ=255)                                                                                                                                                                        gATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAAcc                                                                          <  1:29276/251‑1 (MQ=255)                                                                                                                                                                                   tacaaacttaaaaataaCCACAAAAAGCGAATTGATTACAAATATTTATTGTTCATTATACGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTCGGGCCGGAGACACGCAGACGTCGTACCACACAGGAAAAGATCGCAATTGTTCAACAGAGCTTTAAACCGGGGAGGACgg                                                               >  2:615512/8‑251 (MQ=17)                                                                                                                                                                                   taAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTACATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATCTCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACATATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAAGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATAACgg                                                               >  2:439692/1‑251 (MQ=255)                                                                                                                                                                                        aattaaaattaaCCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTcc                                                          >  1:407487/1‑251 (MQ=255)                                                                                                                                                                                             aaattaaCCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGt                                                     >  1:606210/1‑251 (MQ=255)                                                                                                                                                                                                  aaCCACTATAAGCGAATTGATTAAAAATATTTCTTGTTCATTATCCGCAATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAGTAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGAGGACGGCGTACCACACAGGAACAATTCGCAATTGTTCAGCAGAGCTTTTAACCGGGGATGACGGTCTCCCTCGTTGccc                                                >  2:244720/1‑251 (MQ=14)                                                                                                                                                                                                  aaCCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGcc                                                 <  1:261319/250‑1 (MQ=255)                                                                                                                                                                                                  aaCCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCGCCCTCGTTGcc                                                 <  2:346285/250‑1 (MQ=255)                                                                                                                                                                                                       caATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGATAATAAACTGGCGCCCTGAATCTCCAGACAACCAATTTCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGCTGATTGATGTATTCGGGCAGGAAAAACGCAGACGGCGTACCACACAGGAAACGATCGCAATTGTTCAGCCGAGCTTTGACCCGGGGAAGACGGTCTCACTCGTTGCCCGGcc                                            >  2:521441/1‑249 (MQ=14)                                                                                                                                                                                                          aaatcGAAATGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGACCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACTCAGGAAAAGCTCGCAATTGTTCAGCATAGCTTTGAACCGTGGATGACGGTCTCCCTCGTTGCCCGTCAACAt                                        <  2:572598/247‑1 (MQ=14)                                                                                                                                                                                                                  ttGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCATGCAACCAATATCACTTAAATAAGTGATAGTCTTAATCCTAGTTTTTAGACTAGTACTTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAACGCTCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGTTGTagc                                >  2:465034/1‑251 (MQ=14)                                                                                                                                                                                                                      ttAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAAACAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGcagcc                            >  1:76271/1‑251 (MQ=255)                                                                                                                                                                                                                         aaaaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGcagccagc                         >  1:558841/1‑251 (MQ=255)                                                                                                                                                                                                                            atatTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCagccagcc                        >  1:76965/1‑249 (MQ=40)                                                                                                                                                                                                                              ttttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAATCAATATCTCGTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCATCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGt                     <  2:207344/249‑1 (MQ=255)                                                                                                                                                                                                                                               cGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGACTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTAGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGc   >  1:633642/1‑251 (MQ=14)                                                                                                                                                                                                                                                gTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCCTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGACAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCa  <  1:314199/251‑1 (MQ=14)                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      AATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCA  >  NC_000913/3185852‑3186341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.