New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1135040	70 (1.070)	3 (0.050)	3/464	5.4	3.7%	coding (312/783 nt)	flgG	flagellar basal‑body rod protein FlgG
	?	NC_000913	1135723 =	87 (1.370)					coding (160/699 nt)	flgH	flagellar L‑ring protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CATTGCCAACAACCTGGCAAACGTCAGTACTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGGCTGGAGAGCATTG  >  NC_000913/1134791‑1135290                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                           cATTGCCAACAACCTGGCAAACGTCAGTACTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAgg                                                                                                                                                                                                                                                           <  1:437056/251‑1 (MQ=255)  aTTGCCAACAACCTGGCAAACGTCAGTACTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGt                                                                                                                                                                                                                                                          >  1:678071/1‑251 (MQ=255)       caacaaCCTGGCAAACGTCAGTACTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGt                                                                                                                                                                                                                                                     <  1:384842/251‑1 (MQ=255)        aacaacCTGGCAAACGTCAGTACTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAAATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGtt                                                                                                                                                                                                                                                    >  1:670978/1‑251 (MQ=255)         acaacCTGGCAAACGTCAGTACTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTg                                                                                                                                                                                                                                                   >  2:171144/1‑251 (MQ=255)                  cAAACGTCAGTACTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGt                                                                                                                                                                                                                                          <  1:307974/251‑1 (MQ=255)                  cAAACGTCAGTACTAACGGTTGTAAGCGTCAGCGCGCTGTGTTTGAAGATCTTCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCCCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATggg                                                                                                                                                                                                                                          <  1:259295/251‑2 (MQ=255)                     ccGTCAGTACTAACGGGTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCCGTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCCCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCGTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTtca                                                                                                                                                                                                                                       <  2:453896/250‑1 (MQ=255)                       gTCAGTACTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAg                                                                                                                                                                                                                                                            >  2:37414/1‑228 (MQ=255)                       gTCAGTACTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAg                                                                                                                                                                                                                                                            <  1:37414/228‑1 (MQ=255)                       gTCAGTACTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTtcatc                                                                                                                                                                                                                                     <  1:407014/251‑1 (MQ=255)                          cgTACTAACGGTTTTAAGCGTCCGCGCGCGGTGTTTGAAGATCTGCTTTATCATACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCCCGAGGGTACGCCCGGTCGCCACTGAACGCTTACACAGAAAGGGACACCTGTCGCATACCAACACAAGCATAGATGACGCGATTAAAGGGCAGGGCTTTGTCCAGTTGATGTTACCAGCTGGTTCATCAGc                                                                                                                                                                                                                                  >  2:398681/2‑251 (MQ=255)                             ccTAACGGTTTTAAGCGTCAGCGCGTGGTGTTTGAAGAACTGCATTATCAAACCTTTCGCCAGCCGTGGGCACAGTCTTCCGAACAAACCACCTTCCCCTCCTGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACATCAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCta                                                                                                                                                                                                                               <  2:189673/250‑1 (MQ=255)                             aCTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCt                                                                                                                                                                                                                                >  1:252657/1‑250 (MQ=255)                                        tAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCTCAGTCTTCCGAACAAACCCCCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGAc                                                                                                                                                                                                                     <  1:517362/250‑1 (MQ=255)                                          aGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGc                                                                                                                                                                                                                  <  2:43920/251‑1 (MQ=255)                                           gCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTAACAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGct                                                                                                                                                                                                                 <  1:344124/251‑1 (MQ=255)                                             gTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGctct                                                                                                                                                                                                               >  1:496568/1‑251 (MQ=255)                                                aGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCGGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGAGGGTTCATCCGCCAATACCCGTGACGGCTGTTTc                                                                                                                                                                                                            >  2:710956/1‑251 (MQ=255)                                                  cgcgcgGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTccc                                                                                                                                                                                                          >  2:112081/1‑250 (MQ=255)                                                         tgtTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGACTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCtggtggct                                                                                                                                                                                                   >  2:253447/1‑249 (MQ=255)                                                               aaGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAAc                                                                                                                                                                                             <  1:490686/251‑1 (MQ=255)                                                                  aTCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACggg                                                                                                                                                                                          >  2:617293/1‑251 (MQ=255)                                                                      gCTTTAACAAACCAGTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACATATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGc                                                                                                                                                                                      <  2:678071/251‑1 (MQ=255)                                                                       ctctATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAATCCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACg                                                                                                                                                                                                                    <  2:524185/217‑1 (MQ=255)                                                                       cTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACg                                                                                                                                                                                                                    >  1:524185/1‑220 (MQ=255)                                                                           accaacccATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTTCTCAGCCAGGGAATCCTGTCGCAGACCAAAAACAGCAAAGATGTCGCGATTAAAGGGCAGGGTTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCCATACCCGTGACGGCTCTTTCCAGGTTGATCAGAACGGGCAGCTgggg                                                                                                                                                                                 <  2:416706/245‑3 (MQ=255)                                                                           aTCAAACCATTCGCAAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTg                                                                                                                                                                                 >  2:626513/1‑251 (MQ=255)                                                                                 ccATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCt                                                                                                                                                                           >  1:125995/1‑251 (MQ=255)                                                                                 caaTTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCGCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCt                                                                                                                                                                           <  2:696474/249‑1 (MQ=255)                                                                                       gCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTggtggt                                                                                                                                                                     >  1:400868/1‑251 (MQ=255)                                                                                          aggcGGGGGCACAGTCTTCCGAACAAACCACCTTACCCGCCTGATTACAAACCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGTTGCATCAGCCTATACCCGTGACGGCTCTTTACAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGtttt                                                                                                                                                                  <  1:417840/248‑1 (MQ=255)                                                                                           gCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGTTGTGGACGGCGGGGGGttttt                                                                                                                                                                 >  2:193203/1‑250 (MQ=255)                                                                                                     caGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGcagcc                                                                                                                                                       <  1:632454/251‑1 (MQ=255)                                                                                                            ccGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCCGCGATc                                                                                                                                                >  2:527239/1‑251 (MQ=255)                                                                                                            ccGAAAAAACCCCCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCTGTCTCCACTGAACGCTTACACAGCCAGGTAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGAt                                                                                                                                                 <  2:670978/250‑1 (MQ=255)                                                                                                               aaCAAACCACCTTACCCTCCGGATTACAAATCGACACGGGGGTACGCCCGTTCGCCACTGAAGGCTTACGCAGCCAGGGAAACCTGTCGCAGACCAACGACAGCAAAGATGTAGCGGTTAAGTGGCAGGACTTTTTCAAGGTGATGGTGCCAGATGGATCATCAACGTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACAGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAACCAGCGATCAcc                                                                                                                                             >  1:206412/1‑251 (MQ=255)                                                                                                                  caaCCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGCACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCCGCTGGTGACGGCTGGCTGTTTTCAGGTGCAGCCAACGCTCAccctt                                                                                                                                          >  2:247118/2‑248 (MQ=255)                                                                                                                       cccTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGc                                                                                                                                     <  2:252657/250‑1 (MQ=255)                                                                                                                            accccctggtgtgccaaccGGCACGGGGGTCCTCCCGGGCGCCACGTAACGCTTGCACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAGTATGTCGCGATTAAAGGGTAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCCGAACGGCCAGCTGGTGACGGCTTGTGGTTTTCAGGTGCAGCCAGCGATCCCCAGGCCGGCGAATg                                                                                                                                <  2:272677/233‑1 (MQ=255)                                                                                                                                tCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGtt                                                                                                                            >  1:625013/1‑251 (MQ=255)                                                                                                                                cccGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGtt                                                                                                                            <  1:171144/250‑1 (MQ=255)                                                                                                                                        aCAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATc                                                                                                                     <  1:112081/250‑1 (MQ=255)                                                                                                                                                gCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGt                                                                                                            <  1:701181/251‑1 (MQ=255)                                                                                                                                                   cGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGTGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGAGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGTTCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGCATGCGTTAATGATCCCCCTCGGTCgg                                                                                                         >  2:542/1‑250 (MQ=255)                                                                                                                                                                ggTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTggcc                                                                                             >  2:122839/1‑248 (MQ=255)                                                                                                                                                                   cGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCg                                                                                         >  1:480673/1‑251 (MQ=255)                                                                                                                                                                        cTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAAcc                                                                                    >  1:194574/1‑251 (MQ=255)                                                                                                                                                                                 tACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAACGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACg                                                                                                                                                                              >  1:282842/1‑152 (MQ=255)                                                                                                                                                                                 tACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGAGTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCGCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACg                                                                                                                                                                              <  2:282842/152‑1 (MQ=255)                                                                                                                                                                                       gCCAGGGAAACCTGACGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGAGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGAGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAAGGCGTTAAGTATCACCATCGGTCGGGATGGCGTGGTAAGCGAAACCCACAAAGGCCTGGcg                                                                     >  2:504371/1‑250 (MQ=255)                                                                                                                                                                                          aGGGAAACCTGTCGCAGACCAACAACAGCAACGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGGGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCCGGTGCAGCCAGCGATCACCCTTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACCAGGCCAGGCAGcc                                                                  >  2:435234/1‑250 (MQ=255)                                                                                                                                                                                           gggAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTc                                                                 >  1:221282/1‑251 (MQ=255)                                                                                                                                                                                           gggAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTc                                                                 >  1:123369/1‑251 (MQ=255)                                                                                                                                                                                            ggAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTcc                                                                >  1:400271/1‑251 (MQ=255)                                                                                                                                                                                             gAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCg                                                               >  2:292733/1‑251 (MQ=255)                                                                                                                                                                                              aaaCCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCCGCCAGCGATCACCATTACGGCGAATGCGTTAAGTATCACCATCGATCGGGATGGCGTGGTAGGCGTACCCCAACAAGGCAAGGCAgacccgg                                                              >  2:526999/1‑245 (MQ=255)                                                                                                                                                                                                    ggcGCAGACCAACAACAGCAAAGATGTAGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGGCGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAgg                                                        <  2:480673/249‑1 (MQ=255)                                                                                                                                                                                                            ccAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAg                                                <  1:600226/251‑1 (MQ=255)                                                                                                                                                                                                             caacaaCAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGATGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCAACATTCCGGCGAATGCGTTAAGTATCACCATCGGACGTGATGGCGTGGTCAGCGTAACCAAACAAGGCCAGACAGCTCCGGTTCAGGTTGGGCAGc                                               >  1:370665/1‑251 (MQ=255)                                                                                                                                                                                                                    aGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAAtct                                        >  1:135426/1‑251 (MQ=255)                                                                                                                                                                                                                             gTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCtt                               >  1:493227/1‑251 (MQ=255)                                                                                                                                                                                                                               cgcgATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCttt                              >  1:539096/1‑250 (MQ=255)                                                                                                                                                                                                                               cgcgATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGAGCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTa                             <  1:193203/251‑1 (MQ=255)                                                                                                                                                                                                                               cgcgATTAAAGGGCAGGGCTTTTGCCAGGTGATGGGGCCATATGTTGCTGCAGCCTATACCCTTGACGGCTCTTGCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAATGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCtgta                             <  2:75232/251‑4 (MQ=255)                                                                                                                                                                                                                                gcgATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTat                            <  1:385645/251‑1 (MQ=255)                                                                                                                                                                                                                                  gATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTatga                          <  1:710956/251‑1 (MQ=255)                                                                                                                                                                                                                                     tAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGCTGGGCCGCCCAATCTCACCACCTTTatgaatg                       >  2:505722/1‑251 (MQ=255)                                                                                                                                                                                                                                       aaGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTATGAATGac                     >  2:700212/1‑251 (MQ=255)                                                                                                                                                                                                                                                     ttCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGGCTGgag         >  1:566316/1‑249 (MQ=255)                                                                                                                                                                                                                                                          ggTGATGTTGCCAGATGGTTCATCAGCCTATACCCGCGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGGCTGGAGAGCATTg  <  1:684887/251‑1 (MQ=255)                                                                                                                                                                                                                                                          ggTGACGTTGCCAGATTGTTCATCATCCTATACCTGTGACGGCTCTGTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCGGGTGGTGTGCAGGTGCAGCCAGCGATCACCAATCCGGCGAAGGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCACCGGTTCAGGTTGGGCAGCTCAATCTCACCCCATTTATGAATGACTCCGGGCTGGAGAGCATTg  <  2:459683/251‑1 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                           CATTGCCAACAACCTGGCAAACGTCAGTACTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGGCTGGAGAGCATTG  >  NC_000913/1134791‑1135290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.