Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,273,041 Δ1 bp :: IS186 (+) +6 bp :: Δ1 bp coding (826‑831/2823 nt) uvrA ← UvrABC excision nuclease subunit A

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2514274 =NA (NA)39 (1.010) 33/476 0.2 100% noncoding (2/1345 nt) IS186 repeat region
?NC_000913 = 4273046 0 (0.000)coding (826/2823 nt) uvrA UvrABC excision nuclease subunit A
* ? NC_000913 = 2515616NA (NA)41 (1.060) 41/478 0.1 97.6% noncoding (1344/1345 nt) IS186 repeat region
?NC_000913 4273041 = 1 (0.030)coding (831/2823 nt) uvrA UvrABC excision nuclease subunit A

TATTTGAATTCAATGTTTTCTTTGCCAGAACCGTACAACACCACTTTATGCACGTTCGCGCTCAGGCTGCCCCACGGCGCTTCGACGTCGAACTTATAGTGATCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACAGCAGCTCTTCCGCTTTCGGGTCGTCCATATCCGCCACTACCGCGGTACCACCGGAAAGCTCCAGCGCGGTTTCAAATGACTCGGCAAGACGTTGGGTAAGATCGTCACGCACCTTGAAGCGATCAACCACCACTTCAATGGTATGTTTCTTTT  >  NC_000913/4272793‑4273288
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                       
tATTTGAATTCAATGTTTTCTTTGCCAGAACCGTACAACACCACTTTATGCACGTTCGCGCTCAGGCTGCCCCACGGCGCTTCGACGTCGAACTTATAGTGATCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGCTCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGc                                                                                                                                                                                                                                                        >  1:54596/1‑250 (MQ=255)
 aTTTGAATTCAATGTTTTCTTTGCCAGAACCGTACAACACCACTTTAGGCCCGTTCGCGCGCAGGCTGCCCCACGGCGCTTCGACGTCGAACTTATAGTGATCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCa                                                                                                                                                                                                                                                       <  2:386784/250‑1 (MQ=255)
  tttaattgacgacataatccagccatcgctggatttcccccccagaagtgccggatcctaaaagaagaactaactcgttgtggagaataacaaaaatggtcatctggagcttacaggttgccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgatgcatcgtcttaaagaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAg                                                                                                                                                                                                                                                      <  1:152095‑M2/4‑1 (MQ=255)
           aaTGTTTTCTTTGCCAGAACCGTACAACACCACTTTATGCACGTTCGCGCTCAGGCTGCCCCACGGCGCTTCGACGTCGAACTTATAGTGATCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataag                                                                                                                                                                                                                                            >  1:159556‑M2/1‑243 (MQ=255)
             acataatccagccatcgctggatttaccccccagaagtgccggatccgaaaagaagaactaactcgttgtggagaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCggg                                                                                                                                                                                                                                          >  2:231976‑M2/236‑251 (MQ=255)
                 ttCTTTGCCAGAACCGTACAACACCACTTTATGCACGTTCGCTCGCTGGCTGCCCCAAGGCGCTTCGACGTCGAACTGATAGTGATCTGCCAGCGGTTTCAGCATGTGTAAATAATAGAAGTTGCGGCGGTCCCAGAGACGGATAGCACCAACAGCCAGCGACGGTTCAGGAATCTGGATAACTCGATCAGGGTCGAATTATAGCAGTACGCCAATGAAGTCGCAGGTTGGGAAGGccacctaaaggcac                                                                                                                                                                                                                                       >  2:83927/1‑238 (MQ=255)
                   tccagccatcgctggatttcccccccagaagtgccggatccgaaaagaagaactaactagttgtggagaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggaaccgaggcgtcgcattcttcagatggttcaacccttaagttagagcttatgggGCAGGACCCCGCCGGgttgtt                                                                                                                                                                                                                                     >  2:200217‑M2/230‑250 (MQ=255)
                    ccagctatcgctggatgtcccccccagaagtgccggatccgaaaagaagaacgaactcgtggtggataataacaaaaatgggcacctggagcttacaggtggcctttcgtgtgacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcacctaggcgtcgcatgcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTaa                                                                                                                                                                                                                                   <  1:46413‑M2/23‑1 (MQ=255)
                      agccatcgctggatttcccccccagaagtgccggatccgaaaagaagaactaactcgttgtggagaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatgtttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAAc                                                                                                                                                                                                                                 >  1:301865‑M2/227‑251 (MQ=255)
                         cAGAACCGTACAACACCACTTTATGCACGTTCGCGCTCAGGCTGCCCCACGGCGCTTCGACGTCGAACTTATAGTGATCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaaggg                                                                                                                                                                                                                              <  2:368939‑M2/251‑23 (MQ=255)
                             aCCGTACAACACCACTTTATGCACGTTCGCGCTCAGGCTGCCCCACGGCGCTTCGACGTCGAACTTATAGTGATCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaccttaagggttgt                                                                                                                                                                                                                          <  2:134080‑M2/251‑27 (MQ=255)
                             aCCGTACAACACCACTTTATGCACGTTCGCGCTCAGGCTGCCCCACGGCGCTTCGACGTCGAACTTATAGTGATCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgt                                                                                                                                                                                                                          <  1:128406‑M2/251‑27 (MQ=255)
                               tggatttcccccccagaagtgccggatccgaaaagaagaactaactcgttgtggagaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttctgatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGt                                                                                                                                                                                                                        >  1:228094‑M2/218‑251 (MQ=255)
                               cGTACAACACCACTTTATGCACGTTCGCGCTCAGGCTGCCCCACGGCGCTTCGACGTCGCACTTATAGTGATCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGACAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtgg                                                                                                                                                                                                                        <  2:181144‑M2/251‑29 (MQ=255)
                                gTACAACACCACTTTATGCACGTTCGCGCTCAGGCTGCCCCACGGCGCTTCGACGTCGAACTTATAGTGATCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggt                                                                                                                                                                                                                       <  2:6575‑M2/251‑30 (MQ=255)
                                         ccccagaagtgccggatccgaaaagaagaactaactcgttgtggagaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCa                                                                                                                                                                                                              <  1:158777‑M2/44‑1 (MQ=255)
                                                agtgccggatccgaaaagaagaactaactcgttgtggagaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAGCGAAAACAGTCGCGGCTCCAgttcccg                                                                                                                                                                                                       >  2:289989‑M2/201‑248 (MQ=255)
                                                 gtgccggatccgaaaagaagaactaactcgttgtggagaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGttcaagc                                                                                                                                                                                                      >  2:373419‑M2/200‑248 (MQ=255)
                                                  tgccggatccgaaaagaagaactaactcgttgtggagaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgcggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCCGTTCACGc                                                                                                                                                                                                      >  2:410155‑M2/199‑250 (MQ=255)
                                                  cACGTGCGCGCCCAGGCTGCCCAACGGCGCTTCGACGTCGAACTTATAGTGAGCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTGGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATAGTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagtgttgtggtattacgcctgatatgagt                                                                                                                                                                                                     >  2:56431‑M2/1‑204 (MQ=255)
                                                        cgcgTTCAGGCTTCCCCACGGGTCTTCGACGGCGAACTTATAGTGATCTGCCAGCGATTTCAGCAGCTGGAAATAAAAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACGCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggtcgtggtattacgcctgatatgatttaacgt                                                                                                                                                                                               >  2:241492‑M2/1‑198 (MQ=255)
                                                        cgcgCTCAGGCTGCCCCACGGCGCTTCGACGTCGAACTTATAGTGATCTGCCAGCGATTTCAGCAACTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCATCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgt                                                                                                                                                                                               >  1:24058‑M2/1‑198 (MQ=255)
                                                        atccgaaaagaagaactaactcgttgtggagaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGgtt                                                                                                                                                                                                                                        >  2:90577‑M2/193‑210 (MQ=255)
                                                        atccgaaaagaagaactaactcgttgtggagaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttaggggGCAGGCCCCCGCCGGgtt                                                                                                                                                                                                                                        <  1:90577‑M2/18‑1 (MQ=255)
                                                           gcTCAGGCTGCCCCACGGCGCTTCGACGTCGAACTTATAGTGATCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgcc                                                                                                                                                                                            >  1:335846‑M2/1‑195 (MQ=255)
                                                                  aagatctaactcgttgtggagaataacaaaaatggtcatctggagcttacagttggccattcgtgggccagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAAt                                                                                                                                                                                     <  1:231976‑M2/69‑1 (MQ=255)
                                                                    gaactaactcgttgtggagaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagattgttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTg                                                                                                                                                                                   >  1:361614‑M2/181‑251 (MQ=255)
                                                                           ggCGCTTCGACGTCGAACTTATAGTGATCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGTTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcac                                                                                                                                                                            >  1:398840‑M2/1‑179 (MQ=255)
                                                                           ctcgttgtggagaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGACTCCAGGTCACGAATACTTTAACCGCAAATTGGGCaggg                                                                                                                                                                            >  2:256482‑M2/174‑250 (MQ=255)
                                                                               ttgtggagaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGaa                                                                                                                                                                         <  1:410155‑M2/81‑1 (MQ=255)
                                                                                   ggagaataacaaaactggtcatctggagattacaggtggcaattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaccccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCCGGCGGAGTTgg                                                                                                                                                                    >  1:335811‑M2/166‑251 (MQ=255)
                                                                                     cGTCTAAATTATAGTGAGCTGCCAGCGATTTCAGCATCTGGAAAGAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACACGATCAGGATCGAAAGATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacgtaagggttgtggtatgacgcctgatatgatttaacgtgccgatgaattactctcacgataactggt                                                                                                                                                                  >  2:379639‑M2/1‑169 (MQ=255)
                                                                                     agaataacaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCCATTCACGCCTACTGTAGCCGCAAATTAGGGAGGCGCAGttgggg                                                                                                                                                                  >  2:14763‑M2/164‑249 (MQ=255)
                                                                                        ataaaaaaaagggtcatctggagctttcaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATTCTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGgag                                                                                                                                                               <  1:344974‑M2/91‑1 (MQ=255)
                                                                                            aaaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAAca                                                                                                                                                           <  1:289989‑M2/95‑1 (MQ=255)
                                                                                             aaaaatggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAAc                                                                                                                                                            >  1:143252‑M2/156‑249 (MQ=255)
                                                                                              aaaatgggcatctggagcttacaggtggccagtcgtgggacagaatccctgaaagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagattgttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAAcagc                                                                                                                                                         <  2:361614‑M2/97‑1 (MQ=255)
                                                                                               ataGTGATCTGCCAGCGATTTCAGCCTCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGGCGGGCAGGCcccatcagcgctaacttaagggttgtggtattacgcctgatatggtttaacgtgccgatgaattactctcacgataactggtcagcaattct                                                                                                                                                        <  1:291907‑M2/251‑93 (MQ=255)
                                                                                               ataGTGATCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattc                                                                                                                                                         >  1:242535‑M2/1‑159 (MQ=255)
                                                                                                 atggtcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACagcagc                                                                                                                                                      <  1:24235‑M2/100‑1 (MQ=255)
                                                                                                    gtcagtgggcgcttacaggtggccagtcgtgggacaggatccaggacagcctacaaaacgcaattgaagaacgcgaggcagcggcttaacgaggcacggaggcgtcgccttccgcagatggttcaacccttaagttagcgcgtatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACAGCAGct                                                                                                                                                     <  1:18161‑M2/101‑1 (MQ=255)
                                                                                                     tcatctggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGGAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACAGCAGCTCtt                                                                                                                                                  >  2:28231‑M2/148‑251 (MQ=255)
                                                                                                         gCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTTCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatatt                                                                                                                                              >  2:314275‑M2/1‑149 (MQ=255)
                                                                                                          tggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttacgttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGTAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGACGTTGGCGGAGAACAGCAGCTCTTCCGCt                                                                                                                                             >  2:409523‑M2/143‑251 (MQ=255)
                                                                                                           ggagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACAGCAGCTCTTCCGCt                                                                                                                                             <  1:346502‑M2/109‑1 (MQ=255)
                                                                                                              cgctttcagCATCTGGAAATACTAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTAGCAGGTCGGGCAGGCcccataagcgctaccttacgggttgtggtattacgcctgatatgatttatcgtgccgctgaattactctcacgataactggtcagcaattctggcccatattggta                                                                                                                                          <  2:75882‑M2/247‑107 (MQ=255)
                                                                                                                  acaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagcacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTACAGTTAACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACAGCAGCTCTTCCGCTATCGggtg                                                                                                                                     >  1:177727‑M2/135‑250 (MQ=255)
                                                                                                                      gCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaag                                                                                                                                 >  1:105058‑M2/1‑136 (MQ=255)
                                                                                                                       cATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatat                                                                                                                                                                                                         >  2:166238‑M2/1‑135 (MQ=255)
                                                                                                                       cATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatat                                                                                                                                                                                                         <  1:166238‑M2/178‑44 (MQ=255)
                                                                                                                          ccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCCTACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAAAAGCAGCTCTTCCGCTTTCGGGTCGTCCatat                                                                                                                             >  2:342179‑M2/127‑251 (MQ=255)
                                                                                                                           tGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgagttactctcacgataactggtcagcaat                                                                                                                                                           <  2:386690‑M2/220‑90 (MQ=255)
                                                                                                                            attcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAGGTTGGCGGAGAACAGCAGCTCTTCCGCTTTCGGGGCGTCCATTTcc                                                                                                                           >  2:321916‑M2/125‑251 (MQ=255)
                                                                                                                                ataataGAAGTGGCGGCGATCCCAGTCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCaccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcgcatattggtaagcccgaagaactggatac                                                                                                                       >  1:147697‑M2/1‑126 (MQ=255)
                                                                                                                                   atagcatgggcggcgatcccagtcACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaataactggatacttc                                                                                                                    >  2:198902‑M2/10‑123 (MQ=255)
                                                                                                                                     aGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggccaatattggtacgcccgaagaactggatacttagg                                                                                                                  <  1:217306‑M2/251‑131 (MQ=255)
                                                                                                                                         tatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACAGCAGCTCTTCCGCTTTCGGGTCGTCCATATCCGCCACTACCGCgg                                                                                                              >  1:189665‑M2/112‑251 (MQ=255)
                                                                                                                                              ggcgATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgata                                                                                                                                                                                                          >  2:342536‑M2/1‑112 (MQ=255)
                                                                                                                                              ggcgATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgata                                                                                                                                                                                                          <  1:342536‑M2/154‑43 (MQ=255)
                                                                                                                                                 gATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccg                                                                                                      <  2:374565‑M2/251‑143 (MQ=255)
                                                                                                                                                           aCGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggctctaac                                                                                            >  2:30020‑M2/1‑99 (MQ=255)
                                                                                                                                                            aggaTCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttaggcccgtaatgccggggctccaacc                                                                                           <  2:209880‑M2/250‑154 (MQ=255)
                                                                                                                                                                        gaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACAGCAGCTCTTCCGCTTTCGGGTCGTCCATATCCGCCACTACCGCGGTACCACCGGAACGCTCCAGCGCGGTTTCaa                                                                                >  1:168039‑M2/81‑250 (MQ=255)
                                                                                                                                                                            ccagcGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggctctaacccgccgccgcgaaattc                                                                           >  1:6575‑M2/1‑82 (MQ=255)
                                                                                                                                                                              gaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCCGGCGAAGTTGGCGGAGAACAGCAGCTCTTCCGCTTTCGGGTCGTCCATATCCGCCACTACCGCGGTACCACCGGAAAGCTCCAGCGCGGTTTCAAATGACTc                                                                         >  2:280403‑M2/75‑251 (MQ=255)
                                                                                                                                                                                    aGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCAGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggctctaacccgccgccgcgaaattcgtgatgct                                                                   <  1:67973‑M2/251‑178 (MQ=255)
                                                                                                                                                                                      ttCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgcaggggctctaacccgccgccgcgaaattcgggctgctgc                                                                 <  2:400677‑M2/251‑180 (MQ=255)
                                                                                                                                                                                              gaggcaccgaggcgtcgcattcttcagatggttccacccttaagttcgcgcttatggtGCAGGCCCCCGCCGGGTTGTTACACGAAAACAGTCGCGGCTCCAGTTCACGCATCCTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGCGAACAGCAGCTCTTCCGCTTTCGGGTCGTCCCTATCCGCCACTACCGCGGTCACACCGGAAAGCTCCAGCGCGGTTTCAAATGACCCGGCCAGCCGTTGGGt                                                          >  2:199830‑M2/59‑250 (MQ=255)
                                                                                                                                                                                                 gcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACAGCAGCTCTTCCGCTTTCGGGTCGTCCATATCCGCCACTACCGCGGTACCACCGGAAAGCTCCAGCGCGGTTTCAAATGACTCGGCAAGACGttgggga                                                         >  1:114439‑M2/56‑246 (MQ=255)
                                                                                                                                                                                                   accgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACAGCAGCTCTTCCGCTTTCGGGTCGTCCATATCCGCCACTACCGCGGTACCACCGGAAAGCTCCAGCGCGGTTTCAAATGACTCGGCAAGACGCTGGGTa                                                         >  1:236873‑M2/54‑246 (MQ=255)
                                                                                                                                                                                                      gaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACAGCAGCTCTTCCGCTTTCGGGTCGTCCATATCCGCCACTACCGCGGTACCACCGGAAAGCTCCAGCGCGGTTTCAAATGACTCGGCAAGACGTTGGGTAAGATCGTc                                                 >  2:147748‑M2/51‑251 (MQ=255)
                                                                                                                                                                                                           aTCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggctctaacccgccgccgcgaaattcgtgatgctgcaactctgctacgtctggggct                                            <  1:23476‑M2/251‑201 (MQ=255)
                                                                                                                                                                                                              gcattcttcagatggttcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACAGCAGCTCTTCCGCTTTCGGGTCGTCCATATCCGCCACTACCGCGGTACCACCGGAAAGCTCCAGCGCGGTTTCAAATGACTCGGCAAGACGTTGGGGAAGATCGTCACGCaccc                                         >  2:274206‑M2/43‑250 (MQ=255)
                                                                                                                                                                                                              aGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgacgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgcagaactggatacttcggcacgtaatgccggggctctaacccgccgccgcgaaattcgtgctgctgcaactctgctacgtctggggctggc                                         <  1:4268‑M2/251‑204 (MQ=255)
                                                                                                                                                                                                                gATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggctctaacccgccgccgcgaaattcgtgaggctgcaactctgctacgtctggggctggctt                                       <  2:143531‑M2/251‑206 (MQ=255)
                                                                                                                                                                                                                              tcaacccttaagttagcgcttatgggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACAGCAGCTCTTCCGCTTTCGGGTCGTCCATATCCGCCACTACCGCGGTACCACCGGAAAGCTCCAGCGCGGTTTCAAATGACTCGGCAAGACGTTGGGTAAGATCGTCACGCACCTTGAAGCGATCAaccac                         >  2:268494‑M2/27‑251 (MQ=255)
                                                                                                                                                                                                                              tGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggctctaacccgccgccgcgaaattcgtgatgctgcaactctgctacgtctggggctggcttacggccccgggggg                         <  2:220235‑M2/251‑220 (MQ=255)
                                                                                                                                                                                                                              tGTACGCCAAGGCCGTAGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgaggaattactctaacgataactggtcagcaattctggcccatattggaaagcccgaagaactggatacttcggcacgtaatgccggggctctaacccgccgccgcgaaattcgtgatgctgcaactctgctacgtcaggggctggcttacggcccagggggg                         <  2:145334‑M2/251‑220 (MQ=255)
                                                                                                                                                                                                                                      taagttagcgcttaagggGCAGGCACCCGCCGGGTTGTTAAACGAAAACAGTCGAGGATCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGGAAACAGCAGCTCTTCCGCTTTCGGGTCGCCAATATCCGCCACTACCGCGGGACCACCGGAAAGCCCCAGCGCGGTTTCAAATTACTCGGCAAACCGTTGGGTAAGATCGTCACGACCCTTTAAGCGCTCAACCACCACTTCa                  >  2:191366‑M2/19‑250 (MQ=255)
                                                                                                                                                                                                                                      aaGGCCGTCGCAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggctctaacccgccgccgcgaaattcgtgatgctgcaactctgctacgtctggggctggcttacggccccggggggatgtcatt                 <  2:173357‑M2/251‑228 (MQ=255)
                                                                                                                                                                                                                                                cAGGTCGGGCAGGCcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggctctaacccgccgccgcgaaattcgtgatgctgcaactctgctacgtctggggctggcttacggccccggggggatgtcattacgtgaagtc       <  1:293048‑M2/251‑238 (MQ=255)
                                                                                                                                                                                                                                                     gggGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGCAGTTGGCGGAGAACAGCAGCTCTTCCGCTTTCGGGTCGTCCATATCCGCCACTACCGCGGTACCACCGGAAAGCTCCAGCGCGGTTTCAAATGACTCGGCAAGACGTTGGGTAAGATCGTCACGCACCTTGAAGCGATCAACCACCACTTCAATGGTATGTTTCtttt  >  1:186420‑M2/4‑251 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                       
TATTTGAATTCAATGTTTTCTTTGCCAGAACCGTACAACACCACTTTATGCACGTTCGCGCTCAGGCTGCCCCACGGCGCTTCGACGTCGAACTTATAGTGATCTGCCAGCGATTTCAGCATCTGGAAATAATAGAAGTTGCGGCGATCCCAGCCACGGATCGCACCACCAGCCAGCGACAGTTCCGGATTCTGGATCACTCGATCAGGATCGAAATATTGCTGTACGCCAAGGCCGTCGCAGGTCGGGCAGGCCCCCGCCGGGTTGTTAAACGAAAACAGTCGCGGCTCCAGTTCACGCATACTGTAGCCGCAAATTGGGCAGGCGAAGTTGGCGGAGAACAGCAGCTCTTCCGCTTTCGGGTCGTCCATATCCGCCACTACCGCGGTACCACCGGAAAGCTCCAGCGCGGTTTCAAATGACTCGGCAAGACGTTGGGTAAGATCGTCACGCACCTTGAAGCGATCAACCACCACTTCAATGGTATGTTTCTTTT  >  NC_000913/4272793‑4273288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.