Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	258,921	IS1 (+) +9 bp	pseudogene (246‑254/331 nt)	crl →	RNA polymerase holoenzyme assembly factor Crl

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	257908 =	NA (NA)	47 (0.900)	45/492	0.2	95.8%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	258921 =	2 (0.040)					pseudogene (246/331 nt)	crl	RNA polymerase holoenzyme assembly factor Crl
*	?	NC_000913	= 258675	NA (NA)	61 (1.170)	52/492	0.1	96.7%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 258929	2 (0.040)					pseudogene (254/331 nt)	crl	RNA polymerase holoenzyme assembly factor Crl

CAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258428‑258675 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCACGTTGACGCATACAGCCAGACAATCGAAAAAGAATCGATTATCTTTGCACTTACC  <  NC_000913/258929‑258680                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAACGCAATTCATGGCCATATAAATGATTTTCTGGGGCGTACCGGGATGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAACGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGGAGCTGAACCGGAGGGACAGCTGATAGAAACAACACCCACTGGAGCACCTAAAAAAAACCAACATACACTAAATACGTAAATTGGCCGCATCACCCAC                                                                                                                                                                                                                                                         >  2:353259/1‑251    CGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCc                                                                                                                                                                                                                                                      >  1:499957/1‑250          TCATGGGCATATCAATGATTTTCTGGTGCGTACTGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGGCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACTCTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTC                                                                                                                                                                                                                                                 <  2:151700/250‑1            ATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCCAAAACACCATCATACAATAAATACGTAAGTTGGCCGCATCACCCACGCAGCTTatcc                                                                                                                                                                                                                                              >  2:386038/1‑247             TGGCCATATCAATGATTTTCTGAGGCGTACCGGGTTGAGAAGCGGTGAAAGAGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCAGGCGGTGCTTTTACCGTTACGCACCCCCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATTGAAACCGAAGCCACTGGAGCACCTCAAAAAACCCATCATACACTAAATCAGAAAGTAGGCAGCACCACCCACGCGGCTTCCCGT                                                                                                                                                                                                                                             >  2:369897/1‑251                     TCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCCCCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCCTCACCCACGCAGCTTCTCGTGAAAatc                                                                                                                                                                                                                                      >  2:524232/1‑247                      CAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCCCCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCAC                                                                                                                                                                                                                                    >  1:196853/1‑251                        ATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGC                                                                                                                                                                                                                                  >  1:392230/1‑251                                CTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACAACATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGACTCTCGTGAAACTCACGCAGGGgg                                                                                                                                                                                                                            >  2:384705/1‑247                                 TGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCCGCTTCTCGTGAAACTCACGCAGGGTGTGC                                                                                                                                                                                                                         >  1:419931/1‑251                                  GGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGT                                                                                                                                                                                                                           <  1:115206/248‑1                                           CGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTT                                                                                                                                                                                                               >  1:70142/1‑251                                                   ggAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGTCGGTGCTTTTGCCGTTACGAACCACCCCGTCAGTAGCTGCACAGGAGGGACAGCTGATAGAACCAAAAGCCACTAGAGCACCTCCAAAACACCATCATACACTAAATCAGCAAGTTGGCAGAATCAACCCCGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGGCGTTCAACCcct                                                                                                                                                                                                       >  2:197539/3‑248                                                     AGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCCGCAGCTTCCCGTGCAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTC                                                                                                                                                                                                     >  2:252852/1‑251                                                     AGCGGTGTAAGTGAACTGCAGTTGCCATGGTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTC                                                                                                                                                                                                     <  2:499957/251‑1                                                                 GAACTGAAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACCGGAGGGACAGCTGATAGTAACAGAAGCCACTGGAACACCTCCAAAACACCATCATAAACTAAAACCATAAGTTGACAGCATCACACACGCAGATTACCGTGAAACTCACGCAGGGTGGGCTCCAGTCGTTCAACCACATCAGTGTCTTTTAC                                                                                                                                                                                         >  2:478184/1‑251                                                                        AGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATAAACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAAATCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGcaac                                                                                                                                                                                  >  2:451271/1‑247                                                                                 gttgTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCCCTTCAGTGTCTTTTACCGGAACACTCTTCCAG                                                                                                                                                                         <  1:60795/247‑1                                                                                     TACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCG                                                                                                                                                                      <  1:114201/250‑1                                                                                         tCAGTGAGTGCTGAGATAGCGCTGATGGCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCGGATAGAATCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCCCTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTG                                                                                                                                                                  <  1:364895/249‑1                                                                                          caggGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCT                                                                                                                                                                <  2:145785/247‑1                                                                                           AGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTT                                                                                                                                                               <  1:384411/251‑1                                                                                              GAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCCGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCACCGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCCCTTCAGTGTCTTTTACCGGAACACTCTTCCCGTCGCCTGCTTTAT                                                                                                                                                            >  2:41583/1‑251                                                                                              GAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTT                                                                                                                                                                                            >  2:28479/1‑219                                                                                              GAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTT                                                                                                                                                                                            <  1:28479/219‑1                                                                                                 cGCAGAGATAGCGCTGATGTACGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTCCTGGAACACTCTTCCAGTCGCCTGCATTATCGg                                                                                                                                                         >  2:208487/2‑250                                                                                                      cGATAGCGCTGCTGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCCGCTTCTCGTGAAACTCACGCCGGGTGTGCTCCCGTCGTTCAACCCATTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAAC                                                                                                                                                       >  2:7312/2‑248                                                                                                          AGCGCTGAGGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCA                                                                                                                                                 <  2:277996/250‑1                                                                                                                GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGG                                                                                                                                           <  1:134380/250‑1                                                                                                                GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGGCTTTTACCGGCACACTCTTCCGGTCTCCTGCTTTATCGAACAGACCAAACTGG                                                                                                                                           <  1:208514/250‑1                                                                                                                   GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTAGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAAC                                                                                                                                       >  1:529505/1‑251                                                                                                                                      gttactccCCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCGGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTC                                                                                                                    <  2:538326/243‑1                                                                                                                                       TTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTACGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGCGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGCTTCC                                                                                                                   >  2:432826/1‑251                                                                                                                                                                   AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCC                                                                                       <  1:213313/251‑1                                                                                                                                                                         GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAACACACCCTCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGATTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAGCACTCTTCCAGTCGCCTGCTTTATCGAACAGACCACACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCACCTCCATCCACCAGCCCCAGAATT                                                                                 >  2:50658/1‑251                                                                                                                                                                            AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGA                                                                                                                                                                                     <  2:450987/148‑1                                                                                                                                                                            AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGA                                                                                                                                                                                     >  1:450987/1‑148                                                                                                                                                                                     AAACAGAAGCCAATGGAGCACCTCAAAAACACCATCATACACTAAATCAGGAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGGCGTTCAACCACTTCAGGGGCTTTGAACGGAACACTCTGCCAGGCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGGAGGTAAAACGGGATTCCTGCGCTTCCAGCGCAATCCACCAGCCCCAGAATTCACGCACTTCCG                                                                     <  2:196853/251‑1                                                                                                                                                                                      AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGG                                                                    <  1:524691/251‑1                                                                                                                                                                                           AAGCCACTGGAGCACCTCAAAAACCCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATGCCTGCGCTGCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCG                                                               <  2:246480/251‑1                                                                                                                                                                                             GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGT                                                             <  1:41583/251‑1                                                                                                                                                                                                ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTC                                                          >  2:295717/1‑251                                                                                                                                                                                                ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTC                                                          >  1:153081/1‑251                                                                                                                                                                                                 catgtGCACCGCAAAAACACCACCATACACGAAAGCAGTAAGTTTGGAGGATCACCCCCGCAGCTTGCCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCTCTTCAGTGTCTTTTACCGGAACGCTCTTCCAGTTGCCGGCTTTATCGAACAGAACAAACGGGGAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCA                                                         <  2:125205/246‑1                                                                                                                                                                                                 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCCCTTCCGGTGCCGGTTTC                                                          >  2:470604/1‑250                                                                                                                                                                                                   GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCAC                                                        <  1:295717/250‑1                                                                                                                                                                                                      gacCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCTTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCTGTGCCGGTTTCACGTTG                                                    <  2:288395/248‑1                                                                                                                                                                                                      GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCACGTTG                                                    <  1:202010/251‑1                                                                                                                                                                                                                     CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCACGTTGACGCATACAGCCAGA                                     <  1:524232/251‑1                                                                                                                                                                                                                     CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCACGTTGACGCATACAGCC                                        >  1:55486/1‑248                                                                                                                                                                                                                        CATACACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCACGTTGACGCATACAGCCAGACA                                   <  1:455548/250‑1                                                                                                                                                                                                                         ATACACTAAATCAGTAAGTTGGCAGCATCACCAACGCAGCTTCTCGTGAAACTCACGCAGGGGGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCACGTTGACGCCTACAGCCAGACAAT                                 >  2:448992/1‑251                                                                                                                                                                                                                             cctaaaatatTAAGTTGTCAGCATCACACACGCAGCTTCTCGGGTAACTCACGCATGGTGTGCTCCAGTCGTCTAACCACTTCAGTGTCTTTTACCGTAACACTCTTCCAGCCGCCTGCTTTATCGATCAGACCAAACTGGTTACTGTAGGGAAAACGGGATTCCTGCGCGTCCAGCTCCATCCACCAGCCCCAGAATTCACGCAATTTCGGTGCCGGTTTCACGTTGACGCATACAGCCAGACAATCGAg                             <  2:293554/241‑2                                                                                                                                                                                                                             ACTAAATCAGTAAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCACCCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCATGCTTTATCGAACAGACCAAACTGGTACCTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGTTGCCGGTTTCACGTTGACGCATACAGCCAGACAATCGA                              >  2:347521/1‑250                                                                                                                                                                                                                                        AAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCACGTTGACGCATACAGCCAGACAATCGAAAAAGAATCGAT                  >  1:490214/1‑251                                                                                                                                                                                                                                        AAGTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGAGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCACGTTGACGCATACAGCCAGACAATCGCAAAAGAATCGAT                  >  1:484431/1‑251                                                                                                                                                                                                                                          GTTGGCAGCATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCACGTTGACGCATACAGCCAGACAATCGAAAAAGAATCGATT                 >  1:388220/1‑250                                                                                                                                                                                                                                              GCAGCATCACCCACGCAGCTTCTCGTGAAACTCCCGCAGGGTGTGTTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTTCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGATGCCGGTTTCACGTTGACGCATACAGCCAGACAATCGAAAAAGAATCGATTATCTT            <  1:353259/251‑1                                                                                                                                                                                                                                                   ATCACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTACATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCACGTTGACGCATACAGCCAGACAATCGAAAAAGAATCGATTATCTTTGCAC       <  1:69528/251‑1                                                                                                                                                                                                                                                     CACCCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTTCTCCATTCGTTCAACCACTTCATGGTCTGTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTGCCGGTGCCGGTTTCACGTTGACGCATACAGCCAGACAATCGAAAAAGAATCTATTATCTTTGCACT      <  2:503780/250‑1                                                                                                                                                                                                                                                        CCACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCACGTTGACGCATACAGCCAGACAATCGAAAAAGAATCGATTATCTTTGCACTTACC  <  1:252852/251‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258428‑258675 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACGCAGCTTCTCGTGAAACTCACGCAGGGTGTGCTCCAGTCGTTCAACCACTTCAGTGTCTTTTACCGGAACACTCTTCCAGTCGCCTGCTTTATCGAACAGACCAAACTGGTAACTGTAGGTAAAACGGGATTCCTGCGCTTCCAGCTCCATCCACCAGCCCCAGAATTCACGCACTTCCGGTGCCGGTTTCACGTTGACGCATACAGCCAGACAATCGAAAAAGAATCGATTATCTTTGCACTTACC  <  NC_000913/258929‑258680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.