Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	258,921	IS1 (+) +9 bp	pseudogene (246‑254/331 nt)	crl →	RNA polymerase holoenzyme assembly factor Crl

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	257908 =	NA (NA)	47 (0.900)	45/492	0.2	95.8%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	258921 =	2 (0.040)					pseudogene (246/331 nt)	crl	RNA polymerase holoenzyme assembly factor Crl
*	?	NC_000913	= 258675	NA (NA)	61 (1.170)	52/492	0.1	96.7%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 258929	2 (0.040)					pseudogene (254/331 nt)	crl	RNA polymerase holoenzyme assembly factor Crl

CTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/258151‑257908 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGTTATCGCTATCCAGTTGGTTGATTTTATAATCAACAAACGCTGACATATTTTTGTTGAAATAAT  >  NC_000913/258921‑259166                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCG                                                                                                                                                                                                                                                   >  1:500545/1‑251    TGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTG                                                                                                                                                                                                                                                 >  1:419325/1‑250        GTGGTGAAATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTG                                                                                                                                                                                                                                            <  2:166731/251‑1          GGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCT                                                                                                                                                                                                                                          <  1:85595/251‑1           GTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATGGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTG                                                                                                                                                                                                                                         <  2:36160/251‑1                      GACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGA                                                                                                                                                                                                                               >  1:505571/1‑250                                    CGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAAC                                                                                                                                                                                                                >  1:72181/1‑251                                                      TGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAACTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTG                                                                                                                                                                                              >  1:77745/1‑251                                                         AGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGATGGGACGGAAATCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGGCATCGGGCATTATCTGAACCTAAAACACTATCAATAAGTTGGATTCATTACCAGCTGCGAGAACTGCTGCCGACGCTGAATCTGAAGCTGGAACCGGCGGATTATTTTCGTGACG                                                                                                                                                                                           >  2:139052/1‑251                                                                 CTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGCACCGGCGGATGATTTTTGTGCCGAGGCGGTG                                                                                                                                                                                   >  2:255321/1‑251                                                                    CACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGA                                                                                                                                                                                  >  1:295828/1‑249                                                                     ACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGTAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGT                                                                                                                                                                               >  1:356430/1‑251                                                                         AATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAAC                                                                                                                                                                           >  1:451089/1‑251                                                                            CAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGC                                                                                                                                                                        <  1:492967/251‑1                                                                                   CGATATACGCAGCGAATTGAGCGGCATAACCTGAAGCTGAGGCAGCACCTGGCACGGCGGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACGGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTG                                                                                                                                                                 <  1:326723/251‑1                                                                                             cGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTAGTTCTCCAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCACTAAGTTGGAGTCATTACCATCTGCGAGAACTGCTGCCGACGCTGACTCTGCAGCTGGAACCGGCGAATGATTTTTCTGACGAATCGGTGAAGTTAAagaccggtggtaaatattccg                                                                                                                                                       >  2:415266/2‑230                                                                                              gcaAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGGCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCAGCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTCCCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGTATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGG                                                                                                                                                      <  1:97258/248‑1                                                                                               CGAATTGAGCGGCATAACCTGAAGCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCAGCGGGCATAATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGA                                                                                                                                                     <  1:492185/251‑1                                                                                                            ATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCG                                                                                                                                       <  1:161304/251‑1                                                                                                                     ATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGGGTGAAATGTGCCGGATGCCTCA‑CATCCGGCAAAATTC                                                                                                                              >  1:180960/1‑251                                                                                                                          AGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGAAGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGGGTGAACTGTGCCGGATGCATCA‑CATCCGGCAATATTCATTA                                                                                                                          >  1:505965/1‑250                                                                                                                                 cCCTGGCACGGCTGGGACGGAAGTAGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑T                                                                                                                 <  1:149831/250‑1                                                                                                                                    tgtcactGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TA                                                                                                                >  1:498667/8‑249                                                                                                                                     GGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGGGCCGGTGAAGTTAACGGCGTGAGGGTAATGTGCCGGGTGCATCA‑CCACCGGCACTATTCATTTAAAattgtaagc                                                                                                              >  2:463911/1‑242                                                                                                                                        cCGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAACCGGTGTAGCTGCATGACAAAGTCAGCGGGCATTACCTGAAAATAAAACACAAGCAAAAGGGTGGAGTCATTACCAGCTGCGTGAACTGCAGACGACGCTTAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCAT                                                                                                          <  2:464414/250‑1                                                                                                                                           GCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGGGAGAAATGTGCCTGTGGCCTCA‑CATCCGGCAATATTAATTAAACCTGA‑TACATAATGCC                                                                                                       >  2:392162/1‑251                                                                                                                                             TGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCA                                                                                                      >  1:18097/1‑250                                                                                                                                                 ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGACCCGGCGGATGATTTTCGTGACGAGCCGGTGACGTTAACGGCGTGGGGGAAATTAGCCGGGCGCCGCAACA‑CCGGACATTTTCATTTAAACTGA‑TACGTCCTGCCAACCcc                                                                                                 >  2:4506/1‑249                                                                                                                                                         cgcttgCGTTTTCAAAATGGGTGGAGCGGCAGGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAAAAAGTGGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCGGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATAT                                                                                         <  2:203724/245‑1                                                                                                                                                                   tTCAAAATCGGTGGAGATGCATGACAAAGTCATCGGGCATTATCTGAACAAAAAACATTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTAT                                                                                <  2:187618/249‑1                                                                                                                                                                                 AGCTGAATGACAAAGCCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATGACCAGCGGCGGGAACTGCTGACGACGCTGAATCTGAAGCGGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGT                                                                 <  2:505571/251‑1                                                                                                                                                                                   cggcacGACAAAGCCATCGGGAATTATCCGAACATAAAACACTATAAATAAGGTGGAGTCATTACCAGCTGCGTGAACTGCTGAGGACGCTGAATCTGAAGCGGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGTTA                                                               <  2:187628/245‑1                                                                                                                                                                                       ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGTTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGA‑GTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACAGCGACAATATCATCATTATTAATATTCAATTTGTTATCGCT                                                          <  1:461572/251‑1                                                                                                                                                                                                TCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGTCGGAAGGATCA‑CAACCGGGAATATTCATTAAAAACGAGAACTACA‑GCCAACCGCGACAATATCATAATTATTATAATTCAATTTGTTATCACTATCacgtt                                                  >  2:396290/1‑246                                                                                                                                                                                                   TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGTTATCGCTATCCAGTTGGT                                               >  1:213629/1‑251                                                                                                                                                                                                      GGCATTATCTAAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGGGAACTGCTGACGACGCTGAATCGGAAGCTGGACCCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGTTATCGCTATCCAGTTTGTTGA                                            <  1:9284/251‑1                                                                                                                                                                                                           TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGCACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGGGCCGGTGAAGTTAACGGCGTGAGAGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCCTGCCAACCGCGACAATATCCTCATTATTAATATTCAATTTGTTATCGCTATCCAGATGGTTGATTTT                                        >  1:350973/1‑250                                                                                                                                                                                                            ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCCATTTGTTATCGCTCTCCAGTTGGTTGATTTTAT                                      >  1:24990/1‑251                                                                                                                                                                                                              CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTTCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCCCGACAATATCATCATTATTAATATTCAATTTGTTATCGCTATCCAGTTGGTTTATTTTATA                                     >  1:57199/1‑250                                                                                                                                                                                                                GAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGTTATCGCTATCCAGTTGGTTGATTTTATAATC                                  <  1:418946/251‑1                                                                                                                                                                                                                GAACATAAAACACTAGCAATAAGTGGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTCCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGTTATCGCTATCCAGTTGGTTGATTTTATA                                     <  1:260704/248‑1                                                                                                                                                                                                                     aAAAACTCTATCAATAAGTTGGAGTCATTACCAGCGGCGTGAACTGCGGACGACGCTGAATCTGAATCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGTTATCGCTATCCAGTTGGTTGATTTTATAATCAACAA                             <  2:451089/250‑1                                                                                                                                                                                                                      AAAACACTATCAATAAGTTGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGTTATCGCTATCCAGTTGGTTGATTTTATAATCAACAA                             >  1:435188/1‑250                                                                                                                                                                                                                              ATCAATAAGTGGGAGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGTTATCGCTATCCAGTTGGTTGATTTTATAATCAACAAACGCTGA                      <  1:371016/249‑1                                                                                                                                                                                                                                     gaatcgatcCATTACCAGTGGCGAGAACTGCTGACGACGCTGAATCTGAAGCTGTAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGTTATCGCTATCCAGTTGGTTGATTTTATAATCAACAAACGCTGACATATTTTT             <  2:501162/242‑1                                                                                                                                                                                                                                           AGTCATTACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGTTATCGCTATCCAGTTGGTTGATTTTATAATCAACAAACGCTGACATATTTTT             >  1:501162/1‑245                                                                                                                                                                                                                                                 TACCAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGTTATCGCTATCCAGTTGGTTGATTTTATAATCAACAAACGCTGACATATTTTTGTTGAAATAAT  >  1:116887/1‑250                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/258151‑257908 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGAGTGAAATGTGCCGGATGCATCA‑CATCCGGCAATATTCATTAAAACTGA‑TACGTCATGCCAACCGCGACAATATCATCATTATTAATATTCAATTTGTTATCGCTATCCAGTTGGTTGATTTTATAATCAACAAACGCTGACATATTTTTGTTGAAATAAT  >  NC_000913/258921‑259166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.